mRNA_H-paniculata_contig1147.954.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1147.954.1
Unique NamemRNA_H-paniculata_contig1147.954.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D7FTU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU6_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.420e-10
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:  237 IEADICDVCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCP-----PDWTALPTATPRASSIEFDN 494
            ++ D C VC+      +A LA +   GK V CDPSC++    D L+CN  GLGQ+CR CG C  C+PCP     P+ T+ PT  P    + FD+
Sbjct: 1309 VDDDECSVCSNLTDEQVAVLASYDNGGKQVVCDPSCLDGVT-DPLHCNYFGLGQICRGCGECSLCEPCPGATPAPETTSSPTMVP---DLGFDD 1398
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BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D7G5P7_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P7_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.150e-9
Identity = 66/231 (28.57%), Postives = 99/231 (42.86%), Query Frame = 3 
Query:  186 SYIALLLQNTQGRGPRNIEADICDVCNTAAPADLAALARHGKGVTCDPSCVEHEEGDSLY----CNALGLGQVCRFCGI--CED----CKPCPPDWTALPTATPRASSI--------EFD-------NEC--AKCQGNLTDANIAALAERLSGVLCDASCFMGDT-------LYCNIFGLGQICRLC--GSCEG------CKPCSE-ETFFGISDAPSPSPMTEVKCPEEV 749
            S +A + Q   G+  R ++A   D     + AD+ AL   GK + CDP+C   + G  ++    CN  GL + CR C +  CE     C PC  +     T  P+   +        E D       + C  A C+ N   A+++ + +    + CD  C   DT       L+CN+ GLGQ+CR C   +C G      C PC+E +     S  P+PS +     P  V
Sbjct:   23 SGVARITQAGTGQVARRLDACSSDSDCQGSDADMEALDNEGKTIFCDPAC--EDTGTDIFGGTWCNHFGL-EGCRACDVYNCEGSSGACVPCNGELPEETTPAPQEEGLTLAPISPGETDPPFPIDASSCTAAACEDNADSADLSYIDDNSLTLYCDDKC--SDTPSDPFGGLWCNMRGLGQLCRACRADNCVGWTEDDTCLPCNELQETLPPSVTPAPSDLEATPVPAAV 248
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BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: A0A6H5KTW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW1_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.490e-7
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 3 
Query:  258 VCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCP 434
            +C   +PA   ALA +   GK + CDP+C+    GD  +CN  GLGQ+CR CG C +C PCP
Sbjct:  319 MCADISPAQEEALAMYDGGGKVIVCDPTCLG---GDISHCNYFGLGQLCRGCGSCSECVPCP 377
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BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D8LI25_ECTSI (Mucin 17-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI25_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 3.190e-7
Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:  474 SSIEFDNECAKCQGNLTDANIAALAERLSG---VLCDASCFMG-DTLYCNIFGLGQICRLCGSCEGCKPCS 674
            +  +  ++CA C  NL++  + ALA    G   V+CD+ C  G D L C+ FGLGQICR CG C+GC+ CS
Sbjct: 1172 ADADTTSDCAACS-NLSEVQMLALAAHPGGAKRVVCDSDCLDGVDVLDCDYFGLGQICRGCGDCDGCEACS 1241
[Close]
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D7G4W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W7_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.180e-6
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 3 
Query:  240 EADICDVCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCP 434
            EA+I  +C   +PA   ALA +   GK + CDP+C+     D  +CN  GLGQ+CR CG C  C PCP
Sbjct:  349 EAEIA-MCADISPAQEEALAMYDGGGKVIVCDPTCLGE---DISHCNYFGLGQLCRGCGSCSGCDPCP 412
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FTU6_ECTSI1.420e-1041.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5P7_ECTSI2.150e-928.57Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
A0A6H5KTW1_9PHAE2.490e-746.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI25_ECTSI3.190e-745.07Mucin 17-like protein n=1 Tax=Ectocarpus siliculos... [more]
D7G4W7_ECTSI1.180e-645.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1147contigH-paniculata_contig1147:4254..13127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.3
Seed ortholog evalue1e-21
Seed eggNOG ortholog2880.D7FTU6
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.structural constituent of cuticle
EggNOG OGsKOG3544@1,KOG3544@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1508
Cds size1203
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928853.6613376-UTR-H-paniculata_contig1147:4253..44211622928853.6613376-UTR-H-paniculata_contig1147:4253..4421Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1147 4254..4421 -
1691480645.737514-UTR-H-paniculata_contig1147:4253..44211691480645.737514-UTR-H-paniculata_contig1147:4253..4421Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1147 4254..4421 -
1622928853.7633243-UTR-H-paniculata_contig1147:12990..131271622928853.7633243-UTR-H-paniculata_contig1147:12990..13127Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1147 12991..13127 -
1691480645.7944467-UTR-H-paniculata_contig1147:12990..131271691480645.7944467-UTR-H-paniculata_contig1147:12990..13127Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1147 12991..13127 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928853.6816263-CDS-H-paniculata_contig1147:4421..45531622928853.6816263-CDS-H-paniculata_contig1147:4421..4553Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 4422..4553 -
1691480645.7486515-CDS-H-paniculata_contig1147:4421..45531691480645.7486515-CDS-H-paniculata_contig1147:4421..4553Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 4422..4553 -
1622928853.693158-CDS-H-paniculata_contig1147:5122..54911622928853.693158-CDS-H-paniculata_contig1147:5122..5491Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 5123..5491 -
1691480645.7559423-CDS-H-paniculata_contig1147:5122..54911691480645.7559423-CDS-H-paniculata_contig1147:5122..5491Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 5123..5491 -
1622928853.710697-CDS-H-paniculata_contig1147:6099..63151622928853.710697-CDS-H-paniculata_contig1147:6099..6315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 6100..6315 -
1691480645.7635138-CDS-H-paniculata_contig1147:6099..63151691480645.7635138-CDS-H-paniculata_contig1147:6099..6315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 6100..6315 -
1622928853.7226942-CDS-H-paniculata_contig1147:11839..120791622928853.7226942-CDS-H-paniculata_contig1147:11839..12079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 11840..12079 -
1691480645.771083-CDS-H-paniculata_contig1147:11839..120791691480645.771083-CDS-H-paniculata_contig1147:11839..12079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 11840..12079 -
1622928853.741507-CDS-H-paniculata_contig1147:12744..129901622928853.741507-CDS-H-paniculata_contig1147:12744..12990Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 12745..12990 -
1691480645.782746-CDS-H-paniculata_contig1147:12744..129901691480645.782746-CDS-H-paniculata_contig1147:12744..12990Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1147 12745..12990 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1147.954.1prot_H-paniculata_contig1147.954.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1147 4422..12990 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1147.954.1

>prot_H-paniculata_contig1147.954.1 ID=prot_H-paniculata_contig1147.954.1|Name=mRNA_H-paniculata_contig1147.954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp
MVSYSDMRTVRMVMICSYIALLLQNTQGRGPRNIEADICDVCNTAAPADL
AALARHGKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCPP
DWTALPTATPRASSIEFDNECAKCQGNLTDANIAALAERLSGVLCDASCF
MGDTLYCNIFGLGQICRLCGSCEGCKPCSEETFFGISDAPSPSPMTEVKC
PEEVPLTLECGLEQEGLSCGYDCVCCDGTTERNELCEPLDGSASNVCGFS
TFYNCQERVWVTLSVDFTLCPEPTSGGPTHPKTRDTPSPSAILTSTPPPS
IVFTGSPVSQRLPDGGSDGERGCPVNPPQMERCSRDQEGIECKYGCVCCD
ASTEFDENCEPTEAFEGDRCAFTNFFWCERGQWIWAVSDPYCPSWYSSIP
*
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mRNA from alignment at H-paniculata_contig1147:4254..13127-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1147.954.1 ID=mRNA_H-paniculata_contig1147.954.1|Name=mRNA_H-paniculata_contig1147.954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8874bp|location=Sequence derived from alignment at H-paniculata_contig1147:4254..13127- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCGAGTTGTGCACACGCAGCACCTACGTAATGGTGCACGTTGCCTCGG
TAGGGGGTATGTATGTACTGCTGCTGTTGACTCTCGGCTGTCCTTCCCGG
TAGCCTACCAAGATCAAATCTCCAACCTTGGCAGACGATGGTCAGTTATA
GCGACATGAGGACGGTGCGCATGGTGATGATTTGTTCTTATATTGCCCTG
CTTTTGCAAAACACACAAGGGCGTGGCCCGAGAAACATAGAAGCGGACAT
ATGCGATGTATGTAACACTGCCGCTCCGGCTGACCTTGCGGCCTTGGCTA
GGCACGGAAAGGGGGTGACGTGCGACCCGTCGTGCGTGGAACATGAGGAG
GGAGATTCCTTGTACTGCAATGCACTGGGGTTGGTAAGCTTGTTTGGGGA
ACACCTACAATACAGTGTATTTTTCTCACCAACGTCGGATTCCTACTAAC
TTGTTCTGTGTGCAGTTTGCGGGTTCGTTTGGTCTCTTCCGTTTCACGTA
CTCGAAGTTTTTCACTGTTGTTTAATGTACACTAGTGCAGTGTAGTGTAG
TGTAGTGTAGTGTAGTGTACCGTGCGTTCTGCCCCTCCATTACAGTACAT
CCATATCTGCTCTGACTTTCTGCGTTATGTAAACAATCTTGCTAAAGTTG
CCCGAGCATGTGGCACTGTCTTGAGGAACAAAATTCTTTGCCATTCAACA
ATTGTCTGTGTAAAATGATCTACCTGGGTCCGCATATACAAATTTGTTTC
GTTTCTCTCCCACCACCTCACCCTCCAACATAACAGTTGTGAGATAGAGC
TATAACTCCGACGTCAGTCATTTGGTTGTCGAAGGCAGAATAATGCCCTG
CAGCCAACGTGCAGCAGTTCTCAGAAACTTGGGCAGTTTCCCATGCCACA
GCGTAGGGTGAGATCATTCACGAAGCCCACGATAGTTGTGTTCTTGACCC
TGACTAGCTTCAACTGCAAAAATATAGACAGCGCACGGGGCAAAAGCAAT
CAGGCTGCTCGATTTGACCCATGGTTCTTACTTAAAATGGTATTGCAGGG
TCAAGTATGCAGATTTTGCGGTATATGCGAGGACTGCAAACCATGTCCAC
CCGATTGGACGGCTTTGCCTACAGCAACACCCAGAGCGTCATCGATCGAG
TTCGACAACGAATGCGCAAAATGCCAAGGAAATCTAACGGACGCGAATAT
CGCTGCCCTTGCGGAGAGACTCAGTGGGGTATTGTGTGATGCATCTTGCT
TTATGGGTGACACATTGTACTGCAACATCTTCGGTCTGGTGAGCGAGCAA
GATGTTTTTTACACCGACAGTTGTAGCATCAGTTCCCTTCGTACCATAGG
ACATTAGTGGCAAAGCGTAATGCTTGTGTCTGTGGGTGGTACTCCTACTA
ATGTGGTAGACATTGACTGTGACACGTTGATATTTTCGTCAGTATACTGC
AGGAGCAATCGCATGTATCCATTACCAAGCGAATCAAAAAGATTTGTTGT
ATAGAATCGGTTAAGATCTACTCTTCGTTATACTTTATTTGTTCCTTAAG
TCAGTATCGTTATGGTTATTTGTTGATACCTTTGTCAAATTTGAGATAAA
AAAACACGAGCATATCATTCGAAAGTTCACGCACATATCTCCAAATATAT
TTTCAACCCAAAATAGTTGAGAAAATCGTACAGTAGTAGACCCGCGATAA
GGTGAGCTCATCAGTCAACACGCACAGCGGCACAGCTGCATACCCGCTAT
GCCATGAGTAGCTGGCAATCGCTGGAAACTCCCAGAGATTACGTCGGACC
AATGAGCTTTACCAGTCACAAGTGCCGCAAGTGCGGCGTGGGTAGTAGTA
ACGGCGACGAAGGCGATGTGCTATCCGAGGGCAGGGGTGCTTCGGGAGAG
GCGGCAGTCATTCCGCCTCCGCCGTACTCACACGTAGCGGAGAGTTTTGA
TATTCTGGAGGAAGCGGTTCTGGCGAGCGCCCTGCATGATGTCTCGTTTT
ACCTTCGTAAGGCCACGCTGGCAAGGATGAGCGCCCGTAACAGCACAGGC
GCACGCCAAAGCAAAGTTTTCGAGTTATTTGAGTCGTAGATGTTTCTTGC
GGGACTTAGCGTGAAGTCGATACGCAGCAGGGGTCGCATGTGGTGACATA
CGGAGGGGGTGGATTTCCTGCTGTGGCATTGGTGGATTCTAGAGGTGTTT
TCGTCCTTTTTTCGTTCAGTGGAGTACCATCGACCATTTTTGCTTGTTTG
TTTCTCCCCATTTTCGGGTTCAGCGCGTGTTGAGTATTTCCCCTTTAGGG
ACCATTGTGCTGTTCGACTATTTCTTTCCCCTTTTTCTTATTAGGTTCCG
TGTACTGTTTTTATTTGGACCACTACTGGATCTTGAGTACAACTATATTC
GAGGATATCGGGAGCATAATAAAAAAAGCATGTAGTTTTATGGGATATGA
AATGCAGCTCGCAATTGCGTCCCAACGCTGTAGTAGGCTATTCAGGGGGA
GTAGAATAACTTGGAAAAGTATAAGTCAAAAACGACTTCAACGAAATATA
ACAACATGCTACACTGGATGAGCTTATAAATATGAGCTCTGCTTGCACTC
ACACAGGCCCAAATCTCGTGGTCTCAGGTAATAGCATCATTCATAATCGC
GTTAGACGACATACTCCGCAATAAGGCGGGTTCCCACCTTGCATCGGGCG
CCTATAATAAGGCGGTTCCCGCCTTATTACAAGCTAAGGCGGTATTCTCA
AAGAGGCGGGATATGTTGGCTTGTCACTATACCGCCTTATTGCGGGTCCG
CTACTGTATTTGAACCTTTTGTTTTTCGAAATGGCAACTTTTCGAGAAAC
AGCAAAGTCAATCTAAAACGGCCAAAAATGATGGTTAATCGGCGACATCG
TCTTGACGAGACCTGCGACAAAAACAATATTTTTTTTGCGTTGGATTCCT
TGGCAGCTCCTACACCAAATTCGATATATTATCAACTCCAGTCCTCTCCA
TCAATCCACCAATGCAGCGCCGCGCCGAAAATGTCTCTGTTTATCGCGAC
CATTGCTCCAGAACACCCTCACGCTGCTTTTTCCTCATCCCGGTATGCTT
AGAATTGAAATCGTTCTTCCTCAGCGTTTTCAACAGCGACCGCTGTTGTA
GGGTCAGAGAAACAGAGCGGATCTAGAAGTAGGTGTGAGGGAATTCAAGT
AGGAAATTGAAGGACACAAGAAGGACGCAGGGTAGAAGTCGGTATCAAGT
ATTGCGTTCTAAATGTATCGCCTCCATACCATACAGATATATCATATCTA
TCATCTCATTCCGTGCAGACTCGGATATTGGCGATTGATCGGCAATCGTT
AAGAATCAACGGAGAATGATTAACTGAGAAACCTTGAGCAAGAAACTGCA
ACCGCCTTCTCCATCCCTCATACAAGAAAAGACCACGCGTCACTCTACGA
TAGTGTCACACACACTATACTGCATAGAACCTTCCGAGTGTATGCGAGAC
CCCCTCCCTTCCCCAACACCTGAGAAATGACTATTTTCCCTCTGTCCATA
AGAAAGGTTAAATCGAAAACAGCCCTAATTTTCAACGCGTTGGTGGTGTG
TGGGCTACACTCGCTACTTGCGGTTACGTCGAAGGGAGCGGCTCCTCCCC
TCACAACGCTTCCGAGTGGTGCATACAGAGGGTGCACACGCTGGGGTGGA
AAGTGGCCTCTGTCTCCTGCTCTCCCGTCTGCGTGGTCTTGCGCGAGAGG
TCCCACGTGCCTCCATCAGTCCTACAGCCCTACTACCTATGCTCCAATCG
CTGCCCCCTCCAATCTTAGCTTCCCCCCGAACCCATGGCTCCCACCTCAA
GTGCGAAATCAAGTCCTCCGGCCCCAACACCCCCTTCAGATCTGGCGTGT
CGCCGCTTTTCATAATATTGCATTACCCCGACGACTGCGACTATTTGCGC
CTGGTTAAAAAAAAGTCGCCTGAGTTTCAGAATAAGCACGTGTATTCTAT
GCGCCCCGGACCATTTACGACTGCTCAGAATAACAGTAAAAAATAAAAGA
AAAAGAGTGAACACTTTAGTCGATGTGTCATCATTCATTCCGCCCTTCCT
GAAACTAGGAAAAAAAATTCTAGACGGTCGCAAACAATGATAGTCGTCCG
AAGGTGTAACATTGGTAGTTTGGAAATATGATACCAATAGCACGATATCG
GTACCATGTTTATTAACGTGATAATTGGATATTACTATATTACGTGTATC
ACGTATACTTGACACTGTTGCGTGATGTTTTGCACATTATGATGCGTACG
AAGATCGGAGCAAAGGGGGATTTGAGGTTTGCGGATTGGGGCAGAACCAC
ACATATTATTTTCGGACTGAACCCGAACTGATGGACTTATCATTTGCGAA
ATCCAAGGTAAATGTACACTTGTCAGACGTAAAACAATGAGGAAGTGAGA
ATCGAAGACGAGTGATTCGTATTAAAAACAAATTACTAGGTGGTATTATG
TGAAACTTGATACCTGCTATGTATATAGTATGTATTTTCGTAATAGGAGT
ATGACATATGTAAGGAGTAATGACCAGTTTCCGCCGTTGTATTTACGTAT
CACACCACTTTTAAGATGTCACTTGTTGACAAGTATCAAATCATAATCTG
TGATTATACGAGAGAACACAAAAGCAGACGCTATGCGTATGGACAGCTTT
GTGTCGTATGTGCCGTGCATCAAAGCTATCCCACATAGAAGGAAAACAAG
GAGCACAAGGGCCAGACCAAGTGATACGCGCCGCTGACTGCGTAGATTGT
CAACACAATTTCCAAGGCACTGGTGGACGTTTGATCAGCTGATGAGCCAT
GAGCTAGGGATACTACCACCTTATCGTTTCATTTGATACATCGTTCTCAG
CTGTTATCATTCGATATATTCTTATGATGTATGATATATATATATATTGC
GATATCATATCATGATACTTGATATGATCATGATACTTGATGCGATATCA
AATCAGCAATTTCCGAAGAAGGTAAGATCGGAACGAAGCGGGACCTAGGA
TTTGCGGGTCGGGACTGAGTTGTATGACAGTAATACATCGGATCCAACGC
CCGATTCGAACGAACAGACGGAGTATACACTGGACTAAGTTCAAAGTATA
CGCACCACTTCTCATTGGAAATGGAAGCGGGACCCACGAGCGGAGTCAAG
TAGCGGGTATATATTGATCATACTCCGAGTATGACATATTACCCAATATA
GATACAAAGGTCATGTGAAACACCTCAGGAGGGTTTGCCGTGAATAGGAG
TCTCTAAATACTATACTTTTTCTGTCCCACAAGTTTGTATCGTTATGTCA
TTAGTTAATATATATGTCAAAATTGAGAATCAAATAAATTTGAGCGTATT
ATTCGAAACACCACGACTTCGGCTTGCACATTGACATCTCCAAAATGCAT
TTTCAATACAAAATAGTTAATAAAATACCTGCGGTATCTGAATTGTTGTG
TTTTTTCGAGATGGCAACTTTTTGAGGATCAGCAAAATCGACCAAAAACG
GCCAAAAATTATGGTTAATCGGCGATATCGTCTCAATGAGACCTCCGATG
AGCCCTGAATCAAATCAACGTGCATATATCTGGTCTGAGGTGGTTCGAGT
GCTCTGTTCTGATGTGGTTCGAACTAGAATTCGGTAAGTCCTCAGAGTAG
AGCATTCCACGTGACGTTTTCGGCCCACTTTCGAATGGCCGCTCTGCGTC
CTTGAGGTGCCTACCGCCCCCACATCCCTCACATTACCCGCCGGCCAAGC
ACCGTCACCCATATGGCCACCACAAATAGTCCGTCGTCGCTCCCGGGAAC
CCCACAGGCTAGGGGGAAACAAGCTAAACAGTACGATAGATGACCTTGTA
AAGGGGATTCCAAGTGCTATCCTACAATTCTTGAACGGATGCAATACACG
GAAAATTGTAATTGCAGAGAGAACGTACCTTATTGGCTGAATGGTCTGTT
CGAGTGCAGAGAGTTTTTGCCATTTGCGGGTTCGAATCCCGCTGAATGTG
AATAAAAAATCATGCACCCCTCCTCCGATCCTCCACAAATGATTTCAAGT
TTTTGCCCCTGTGCTCCCCGTCAATTTGCAGTCCTCGTGAACAGCCCAGC
ATAAGATATATTTCATACACGACCGCAGCTGCGTGCGCGCCACCCTGTGG
TATTTTGACTTCCCCCGTCTAACGTCAAACCCCGACCACCTGCAGTATCA
CTTTAGAAGGTGTCACCTTGGCATCAAGTAATCAAGAAATTAAATGCAAC
GTGTTTTGCAGGGCATGCTCCGTCGGTATCTCTCGTTCTTCGAAGTAGAC
TTCTATGAAAAATCATTGGAAAAAGCGAACATTTAGTATGCAGTCGAAAT
TGCTCCTTGAAGCGTCTGGCGCAGGGTGCACGCACGATGTGTGGAGCCTG
CAAGTGCTCACTGCTCTATTCCCTACCCTTCTCGTGTTACCTCTTCGACT
TCACGGTCATAGCCACATCGAGATTCAGCACATGGGCGGGGCAGACGAAT
CACCGTTCGTTTTATTCTTCGAAGCAATGCTCGATAGCGTGCCGACATGT
CATCTGGGTGAGAGTATGTGCAATTGGGCTCAACAGGTGGATATAAATAT
ATATATATATATTCGTATATGTGGCATACTCGGCTTCAATTCGACATGTT
ACAAAAATCTGTTGATTGCATGCCATCAGCCTTTCATGACAACCCGAGTC
GGGTCGACTTCCTTGCCTGCACGTGTACGTTTGAATAACTGAACTTAAAA
CGAATGAAATAGGGCCAAATTTGTCGCTTGTGCGGGTCGTGCGAGGGCTG
CAAACCATGTTCAGAGGAAACCTTTTTCGGCATCTCAGATGCCCCCTCAC
CTTCCCCGATGACTGAGGTAAAGTGCCCCGAAGAAGTGCCACTGACGTTA
GAGTGCGGGTTGGAACAGGAAGGACTATCTTGTGGCTACGATTGCGTTTG
TTGCGACGGGACGACTGAGCGGAACGAGGTGGGTGCGATGCACGTTGTGA
CTGCGGTTTCACTGGTAACGGAGGTAGCTCCAGTCACAAGGGAAGTGATA
TTGAAACTGAGATTGTTGGAAAAGCGCCACCCTGTCGCAGTATGTTGCTG
TCACATAGCGTTTATCTGTAGGTGCCTAGGTGATGCTTATACAAAATCAT
TCCAACTGCTTTAACAATCAATACCCACTGCCAACGCTATAGCGCGTTGA
ATAGTGTTGATTGCATGAGTAGTGTTCCAAATCTATAGTATATGAATTTA
CCAAGCACCACCTCCCAATTTATAATAAATTTGTGTCGTTTCTTACTGTT
TCCGAGGTGTCCTATGCTCTTCTTTGGGCAACCCAATTGTACTAGACAGA
GGATTAGCACGTATCTGTGACCGGTGCACCGTCTCAATAATCGCGTGGAT
TACCGCGCTCTCGAGTGACACCTGCTAAGTTCCCTTAATCTCATGGAATC
TGGCGTTATTTCAGATGTGCAAGGAGCCATTGCGTTCGTATACGGTCGCT
ATAATATTCTAGCTCATTTGCCCTCAACATATTATGTGACTGCCCCGCTG
CGCTCTTCCCGTCCTCTTATCACCACCTGGCAGCAGTTGTGCGAGCCGTT
AGACGGAAGCGCGTCGAACGTGTGCGGGTTTTCCACGTTCTATAACTGCC
AAGAGCGAGTTTGGGTTACATTGAGCGTGGATTTCACGCTTTGTCCCGAG
CCGACATCAGGAGGACCAACGCACCCAAAAACGAGAGATACGCCATCACC
TTCTGCTATATTAACATCAACTCCCCCCCCTTCTATTGTGTTCACCGGGA
GCCCTGTTTCTCAACGGCTCCCCGATGGTGGCAGCGACGGGGAAAGGGGA
TGCCCTGTCAACCCTCCACAGATGGAGAGGTGTTCCAGAGATCAAGAAGG
GATCGAGTGCAAGTATGGGTGTGTTTGCTGCGATGCTTCCACTGAGTTTG
ACGAGGTGTGTTGACACGGTGTAGAGCGGCATGTCTTCAAACGACGGTTA
TCTCGGAAGTCATGGTGTATGGTTTTGATCCCGCTTATCTCCGCTAGTTT
CGAGGCCTGATATTGCGTCTCAGCACTTGAAATCGCGTCTCAACACTTGA
AATAGAGGCCTTCTTGAATTGGAGGGTGCTTAAAATGAAGGGCATTATTC
GTAGAACATTTGCCCGAAAGTAGAGGAGGGAAATGGATGTTACGTGGCCG
GCAGCTGGGGGTAGATTCGTATCTTCCCGTCTTTCACCGAAACTATTTGC
GAATGAAGGAAGTTGTCGATCGTCTGCAAGTTTTTTGGCGTTCACAACAG
TCTAGATTAACTTTTGAAGGGAAGGATGGATTGAAGTATCTGTTCAAAAG
CGAGGAACGTCTGGAGATTTTGATACTTTTCTGTCCGATACACGCGAAAT
TGACGGGTGTTTCCCTACACGAGCATTTGGTTCCTACAGTCGACGTAATG
CGTCTTCTTCACTCCGACGTGCTGACACAATCCACCCACCCTCTTGCTTT
CGCTGGATATTGTGGTTGTTACAGAACTGCGAACCGACGGAGGCCTTTGA
GGGGGACAGATGCGCGTTTACGAACTTTTTTTGGTGCGAAAGAGGACAAT
GGATATGGGCAGTTTCAGATCCGTACTGTCCGTCGTGGTATAGCTCCATC
CCCTGACCCTTATGGTCCTGGCATATCCTGTTACTCGGTTCCGTGGTTTG
TGCATAGATCGGTGTAGATATTGGAATGATTTGTGTGGTGTGGTGGTTTC
AGTAACTTGACGTTTTAAAACGTTTTTACTAGAAAGCCATAGAAATAAAA
AATTAAATGCCAAACGAGACACAC
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Coding sequence (CDS) from alignment at H-paniculata_contig1147:4254..13127-

>mRNA_H-paniculata_contig1147.954.1 ID=mRNA_H-paniculata_contig1147.954.1|Name=mRNA_H-paniculata_contig1147.954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2406bp|location=Sequence derived from alignment at H-paniculata_contig1147:4254..13127- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCAGTTATAGCGACATGAGGACGGTGCGCATGGTGATGATTTGTTC
TTATATTGCCCTGCTTTTGCAAAACACACAAGGGCGTGGCCCGAGAAACA
TAGAAGCGGACATATGCGATGTATGTAACACTGCCGCTCCGGCTGACCTT
GCGGCCTTGGCTAGGCACGGAAAGGGGGTGACGTGCGACCCGTCGTGCGT
GGAACATGAGGAGGGAGATTCCTTGTACTGCAATGCACTGGGGTTGATGG
TCAGTTATAGCGACATGAGGACGGTGCGCATGGTGATGATTTGTTCTTAT
ATTGCCCTGCTTTTGCAAAACACACAAGGGCGTGGCCCGAGAAACATAGA
AGCGGACATATGCGATGTATGTAACACTGCCGCTCCGGCTGACCTTGCGG
CCTTGGCTAGGCACGGAAAGGGGGTGACGTGCGACCCGTCGTGCGTGGAA
CATGAGGAGGGAGATTCCTTGTACTGCAATGCACTGGGGTTGGGTCAAGT
ATGCAGATTTTGCGGTATATGCGAGGACTGCAAACCATGTCCACCCGATT
GGACGGCTTTGCCTACAGCAACACCCAGAGCGTCATCGATCGAGTTCGAC
AACGAATGCGCAAAATGCCAAGGAAATCTAACGGACGCGAATATCGCTGC
CCTTGCGGAGAGACTCAGTGGGGTATTGTGTGATGCATCTTGCTTTATGG
GTGACACATTGTACTGCAACATCTTCGGTCTGGGTCAAGTATGCAGATTT
TGCGGTATATGCGAGGACTGCAAACCATGTCCACCCGATTGGACGGCTTT
GCCTACAGCAACACCCAGAGCGTCATCGATCGAGTTCGACAACGAATGCG
CAAAATGCCAAGGAAATCTAACGGACGCGAATATCGCTGCCCTTGCGGAG
AGACTCAGTGGGGTATTGTGTGATGCATCTTGCTTTATGGGTGACACATT
GTACTGCAACATCTTCGGTCTGGGCCAAATTTGTCGCTTGTGCGGGTCGT
GCGAGGGCTGCAAACCATGTTCAGAGGAAACCTTTTTCGGCATCTCAGAT
GCCCCCTCACCTTCCCCGATGACTGAGGTAAAGTGCCCCGAAGAAGTGCC
ACTGACGTTAGAGTGCGGGTTGGAACAGGAAGGACTATCTTGTGGCTACG
ATTGCGTTTGTTGCGACGGGACGACTGAGCGGAACGAGGGCCAAATTTGT
CGCTTGTGCGGGTCGTGCGAGGGCTGCAAACCATGTTCAGAGGAAACCTT
TTTCGGCATCTCAGATGCCCCCTCACCTTCCCCGATGACTGAGGTAAAGT
GCCCCGAAGAAGTGCCACTGACGTTAGAGTGCGGGTTGGAACAGGAAGGA
CTATCTTGTGGCTACGATTGCGTTTGTTGCGACGGGACGACTGAGCGGAA
CGAGTTGTGCGAGCCGTTAGACGGAAGCGCGTCGAACGTGTGCGGGTTTT
CCACGTTCTATAACTGCCAAGAGCGAGTTTGGGTTACATTGAGCGTGGAT
TTCACGCTTTGTCCCGAGCCGACATCAGGAGGACCAACGCACCCAAAAAC
GAGAGATACGCCATCACCTTCTGCTATATTAACATCAACTCCCCCCCCTT
CTATTGTGTTCACCGGGAGCCCTGTTTCTCAACGGCTCCCCGATGGTGGC
AGCGACGGGGAAAGGGGATGCCCTGTCAACCCTCCACAGATGGAGAGGTG
TTCCAGAGATCAAGAAGGGATCGAGTGCAAGTATGGGTGTGTTTGCTGCG
ATGCTTCCACTGAGTTTGACGAGTTGTGCGAGCCGTTAGACGGAAGCGCG
TCGAACGTGTGCGGGTTTTCCACGTTCTATAACTGCCAAGAGCGAGTTTG
GGTTACATTGAGCGTGGATTTCACGCTTTGTCCCGAGCCGACATCAGGAG
GACCAACGCACCCAAAAACGAGAGATACGCCATCACCTTCTGCTATATTA
ACATCAACTCCCCCCCCTTCTATTGTGTTCACCGGGAGCCCTGTTTCTCA
ACGGCTCCCCGATGGTGGCAGCGACGGGGAAAGGGGATGCCCTGTCAACC
CTCCACAGATGGAGAGGTGTTCCAGAGATCAAGAAGGGATCGAGTGCAAG
TATGGGTGTGTTTGCTGCGATGCTTCCACTGAGTTTGACGAGAACTGCGA
ACCGACGGAGGCCTTTGAGGGGGACAGATGCGCGTTTACGAACTTTTTTT
GGTGCGAAAGAGGACAATGGATATGGGCAGTTTCAGATCCGTACTGTCCG
TCGTGGTATAGCTCCATCCCCTGAAACTGCGAACCGACGGAGGCCTTTGA
GGGGGACAGATGCGCGTTTACGAACTTTTTTTGGTGCGAAAGAGGACAAT
GGATATGGGCAGTTTCAGATCCGTACTGTCCGTCGTGGTATAGCTCCATC
CCCTGA
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