prot_H-paniculata_contig11246.797.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11246.797.1
Unique Nameprot_H-paniculata_contig11246.797.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
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BLAST of mRNA_H-paniculata_contig11246.797.1 vs. uniprot
Match: A0A6H5KZP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP9_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.330e-25
Identity = 50/73 (68.49%), Postives = 59/73 (80.82%), Query Frame = 0 
Query:    1 MGIGGLRYTVTFYPQACLVHVNLAPLVVTLVHRDGVGINP---NYGKTLEMIPELSAALEPLRAQVEQAYRED 70
            MG+G LRYTVTFYPQACLVHVNLAPLVVTLVH+DG   +    N+G  L++IPE+S ALEPLR QV +AY E+
Sbjct:   71 MGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQVLRAYWEE 143
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BLAST of mRNA_H-paniculata_contig11246.797.1 vs. uniprot
Match: A0A836CDC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC5_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.750e-14
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0 
Query:    1 MGIGGLRYTVTFYPQACLVHVNLAPLVVTLVHRDGVGINPNYGKTLEMIPELSAALEPLRAQVEQAYREDLA 72
            MG+G L+ T T Y + CLVHV + PLV+T VH      + N G TL+++PEL  AL+P+RAQV+  Y  + A
Sbjct:   56 MGLGPLKVTTTLYDKLCLVHVYMLPLVITCVHSP----DSNCGTTLDIVPELREALDPIRAQVQAVYDREFA 123
[Close]
BLAST of mRNA_H-paniculata_contig11246.797.1 vs. uniprot
Match: A0A7S2APW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APW0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.420e-7
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0 
Query:    1 MGIGGLRYTVTFYPQACLVHVNLAPLVVTLVHRDGVGINPNYGKTLEMIPELSAALEPLRA 61
            M +G +R    FY    L+HVN++PLV+TL+ + G     N G  L M+P L+ +LEP+ A
Sbjct:   68 MELGAVRSVTAFYQNMMLIHVNISPLVLTLIAKPGA----NAGALLAMVPSLNESLEPISA 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11246.797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZP9_9PHAE5.330e-2568.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CDC5_9STRA6.750e-1447.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2APW0_9STRA7.420e-740.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.30coord: 1..66
e-value: 1.6E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11246contigH-paniculata_contig11246:3301..3909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11246.797.1mRNA_H-paniculata_contig11246.797.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11246 601..7211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11246.797.1 ID=prot_H-paniculata_contig11246.797.1|Name=mRNA_H-paniculata_contig11246.797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
MGIGGLRYTVTFYPQACLVHVNLAPLVVTLVHRDGVGINPNYGKTLEMIP
ELSAALEPLRAQVEQAYREDLAA*
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