prot_H-paniculata_contig11236.791.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11236.791.1
Unique Nameprot_H-paniculata_contig11236.791.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.310e-38
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 0
Query:   26 ACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 114
            ACDRAPTA VWMKAALLEREL+APEAAL LIDTALPSYP F+KLYMMAGQ+ S +L  P RAREYYQRGL ACPGSIP+WRLAA L+E++
Sbjct:  179 ACDRAPTALVWMKAALLERELQAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELDLPERAREYYQRGLRACPGSIPLWRLAARLEERT 268          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 9.770e-38
Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 0
Query:   26 ACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 114
            ACDRAPTA VWMKAALLERELKAPEAAL LIDTALPSYP F+KLYMMAGQ+ S +L  P RAREYYQRGL ACPGSIP+WRLAA L+E++
Sbjct:  540 ACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERT 629          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S2UEJ1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEJ1_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.810e-33
Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    2 VWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSKLGQP------GRAREYYQRGLSACPGSIPMWRLAACLDEQS 114
            VWLAA K+EWENN+ ERARVLL++A DRAPT +V+MK+A+LERE +  + AL LI+  +  YP F K YMM GQ+ S    P       RAR++YQRGL ACP SI +W LA+ L+E++
Sbjct:    1 VWLAAAKIEWENNEVERARVLLRRARDRAPTNRVYMKSAILERECQQLDDALDLIEEGIQRYPTFCKFYMMGGQICSDDLTPKSKYTLDRARKFYQRGLQACPNSIVLWTLASHLEERA 119          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S3MBI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBI4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.230e-32
Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 0
Query:    1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 113
            Q+WLAAVKLEWEN++FERAR+LL KA + AP+ +VW+K+ALLERE+  P+ AL L++ A+  YPAFSK Y+MAGQV   +L +  +AR  Y  G+ A P  +P+WR    L+E+
Sbjct:   83 QIWLAAVKLEWENDEFERARLLLLKAREGAPSERVWLKSALLEREVGRPQEALKLLEEAMKRYPAFSKFYLMAGQVLDEELKEVVKARNVYLAGIQATPECVPLWRSLIRLEER 196          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S3MCI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.990e-30
Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 0
Query:    1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 113
            Q+WLAAVKLEWEN++FERAR+LL KA + AP+ +VW+K+ALLERE+  P+ AL L++ A+  YPAFSK Y+MAGQV   +L +  +AR  Y  G+ A P  +P+WR    L+E+
Sbjct:  643 QIWLAAVKLEWENDEFERARLLLLKAREGAPSERVWLKSALLEREVGRPQEALKLLEEAMKRYPAFSKFYLMAGQVLDEELKEVVKARNVYLAGIQATPECVPLWRSLIRLEER 756          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S2LLP8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLP8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.480e-30
Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    2 VWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 113
            VWLAAVKLEWE  +++RARVLL++A +RAPT +V+MK+ALLERELK  + AL  I+  +  +P + KLYMM GQ+    L Q  RAR+++QRGL  C     +W LA+ L+E+
Sbjct:    4 VWLAAVKLEWETGEYDRARVLLQRARERAPTGRVYMKSALLERELKEFDTALEFIEEGIGKFPKYEKLYMMGGQICGDDLKQEQRARDFFQRGLKICSSCEVLWILASTLEER 116          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S1BX18_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BX18_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.420e-29
Identity = 59/114 (51.75%), Postives = 83/114 (72.81%), Query Frame = 0
Query:    1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSK-LGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 113
            +VWLAAVKLEWEN+++ERAR+LL +A +R P  +V+MK+ALLERE +  E AL L++  +     FSK YM+AGQ+ ++ L    RAR++YQRGL   P S+ +W LAA L+E+
Sbjct:   42 EVWLAAVKLEWENDEYERARMLLSRARERCPADRVFMKSALLERECQRHEDALRLLEEGVARNDKFSKFYMIAGQICAEDLQDVDRARKFYQRGLQKNPHSLVLWILAARLEER 155          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 112 bits (279), Expect = 2.170e-26
Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 0
Query:   23 LKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSK-LGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 113
            L++A ++APTA+VWMK ALLEREL  PEAAL L+D     YP F+K YMM GQ   + L  P RAR YYQ GL  CPGS+P+WRLAA LDE+
Sbjct:  441 LRRAREKAPTARVWMKGALLERELGRPEAALELVDGGARRYPTFAKFYMMGGQACDEDLAAPDRARRYYQDGLRRCPGSLPLWRLAARLDER 532          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A507DC59_9FUNG (PRP1_N domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DC59_9FUNG)

HSP 1 Score: 108 bits (270), Expect = 3.650e-25
Identity = 56/115 (48.70%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSS-KLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 114
            Q++LAAVKLE EN  + RAR LL KA + A T +VWMK+A+ ER+L  P+AA+ L+D AL  +P+ +KL+MM GQV   + G    ARE+Y +G+ +C  SIP+W L++ L+E++
Sbjct:  622 QLYLAAVKLEAENEQYHRARPLLAKARNEAGTVRVWMKSAVFERQLGQPDAAIKLLDEALVKFPSAAKLWMMRGQVEEDENGNLAAAREFYAKGVKSCSKSIPLWILSSRLEEKA 736          
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A1D2AIT5_ORNBR (Pre mrna processing factor 6 (Fragment) n=1 Tax=Ornithodoros brasiliensis TaxID=888526 RepID=A0A1D2AIT5_ORNBR)

HSP 1 Score: 103 bits (256), Expect = 4.490e-25
Identity = 56/114 (49.12%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 114
            ++WLAAVKLE ENN+FERAR LL KA   APTA+V MK+  LE  L+    A+ L++  L  Y  F KL+MM GQ+    G    AR  Y  GL  CP SIP+W L + L+E++
Sbjct:   97 EIWLAAVKLESENNEFERARRLLAKARSSAPTARVMMKSVRLEWALRDLSQAMELLEEGLKLYSDFPKLWMMKGQILESQGYVEEARGIYNLGLKKCPTSIPLWLLLSRLEERT 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYH2_9PHAE4.310e-3880.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD2_ECTSI9.770e-3881.11PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2UEJ1_9STRA3.810e-3354.62Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3MBI4_9STRA3.230e-3253.51Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3MCI9_9STRA1.990e-3053.51Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2LLP8_9STRA4.480e-3052.21Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1BX18_9STRA2.420e-2951.75Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A7S3XY73_HETAK2.170e-2660.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A507DC59_9FUNG3.650e-2548.70PRP1_N domain-containing protein n=1 Tax=Synchytri... [more]
A0A1D2AIT5_ORNBR4.490e-2549.12Pre mrna processing factor 6 (Fragment) n=1 Tax=Or... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 14..45
e-value: 0.074
score: 22.2
coord: 81..113
e-value: 25.0
score: 12.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..111
e-value: 3.5E-15
score: 58.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 10..108
NoneNo IPR availablePFAMPF13428TPR_14coord: 69..108
e-value: 4.0E-5
score: 24.1
NoneNo IPR availablePFAMPF13432TPR_16coord: 4..64
e-value: 1.6E-4
score: 22.3
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 2..113
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 2..113
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 33..100
score: 10.709

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11236contigH-paniculata_contig11236:5912..7052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11236.791.1mRNA_H-paniculata_contig11236.791.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11236 5912..7052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11236.791.1 ID=prot_H-paniculata_contig11236.791.1|Name=mRNA_H-paniculata_contig11236.791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPE
AALTLIDTALPSYPAFSKLYMMAGQVSSKLGQPGRAREYYQRGLSACPGS
IPMWRLAACLDEQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR027108Prp6/Prp1/STA1
IPR013026TPR-contain_dom