mRNA_H-paniculata_contig11236.791.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE) HSP 1 Score: 142 bits (358), Expect = 4.310e-38 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 76 ACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 342 ACDRAPTA VWMKAALLEREL+APEAAL LIDTALPSYP F+KLYMMAGQ+ S +L P RAREYYQRGL ACPGSIP+WRLAA L+E++ Sbjct: 179 ACDRAPTALVWMKAALLERELQAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELDLPERAREYYQRGLRACPGSIPLWRLAARLEERT 268
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI) HSP 1 Score: 144 bits (363), Expect = 9.770e-38 Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 76 ACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 342 ACDRAPTA VWMKAALLERELKAPEAAL LIDTALPSYP F+KLYMMAGQ+ S +L P RAREYYQRGL ACPGSIP+WRLAA L+E++ Sbjct: 540 ACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERT 629
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S2UEJ1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEJ1_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.810e-33 Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 4 VWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSKLGQP------GRAREYYQRGLSACPGSIPMWRLAACLDEQS 342 VWLAA K+EWENN+ ERARVLL++A DRAPT +V+MK+A+LERE + + AL LI+ + YP F K YMM GQ+ S P RAR++YQRGL ACP SI +W LA+ L+E++ Sbjct: 1 VWLAAAKIEWENNEVERARVLLRRARDRAPTNRVYMKSAILERECQQLDDALDLIEEGIQRYPTFCKFYMMGGQICSDDLTPKSKYTLDRARKFYQRGLQACPNSIVLWTLASHLEERA 119
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S3MBI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBI4_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.230e-32 Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 339 Q+WLAAVKLEWEN++FERAR+LL KA + AP+ +VW+K+ALLERE+ P+ AL L++ A+ YPAFSK Y+MAGQV +L + +AR Y G+ A P +P+WR L+E+ Sbjct: 83 QIWLAAVKLEWENDEFERARLLLLKAREGAPSERVWLKSALLEREVGRPQEALKLLEEAMKRYPAFSKFYLMAGQVLDEELKEVVKARNVYLAGIQATPECVPLWRSLIRLEER 196
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S3MCI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI9_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.990e-30 Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 339 Q+WLAAVKLEWEN++FERAR+LL KA + AP+ +VW+K+ALLERE+ P+ AL L++ A+ YPAFSK Y+MAGQV +L + +AR Y G+ A P +P+WR L+E+ Sbjct: 643 QIWLAAVKLEWENDEFERARLLLLKAREGAPSERVWLKSALLEREVGRPQEALKLLEEAMKRYPAFSKFYLMAGQVLDEELKEVVKARNVYLAGIQATPECVPLWRSLIRLEER 756
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S2LLP8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLP8_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.480e-30 Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 4 VWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQV-SSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 339 VWLAAVKLEWE +++RARVLL++A +RAPT +V+MK+ALLERELK + AL I+ + +P + KLYMM GQ+ L Q RAR+++QRGL C +W LA+ L+E+ Sbjct: 4 VWLAAVKLEWETGEYDRARVLLQRARERAPTGRVYMKSALLERELKEFDTALEFIEEGIGKFPKYEKLYMMGGQICGDDLKQEQRARDFFQRGLKICSSCEVLWILASTLEER 116
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S1BX18_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BX18_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.420e-29 Identity = 59/114 (51.75%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSK-LGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 339 +VWLAAVKLEWEN+++ERAR+LL +A +R P +V+MK+ALLERE + E AL L++ + FSK YM+AGQ+ ++ L RAR++YQRGL P S+ +W LAA L+E+ Sbjct: 42 EVWLAAVKLEWENDEYERARMLLSRARERCPADRVFMKSALLERECQRHEDALRLLEEGVARNDKFSKFYMIAGQICAEDLQDVDRARKFYQRGLQKNPHSLVLWILAARLEER 155
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK) HSP 1 Score: 112 bits (279), Expect = 2.170e-26 Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 67 LKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSK-LGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQ 339 L++A ++APTA+VWMK ALLEREL PEAAL L+D YP F+K YMM GQ + L P RAR YYQ GL CPGS+P+WRLAA LDE+ Sbjct: 441 LRRAREKAPTARVWMKGALLERELGRPEAALELVDGGARRYPTFAKFYMMGGQACDEDLAAPDRARRYYQDGLRRCPGSLPLWRLAARLDER 532
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A507DC59_9FUNG (PRP1_N domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DC59_9FUNG) HSP 1 Score: 108 bits (270), Expect = 3.650e-25 Identity = 56/115 (48.70%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSS-KLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 342 Q++LAAVKLE EN + RAR LL KA + A T +VWMK+A+ ER+L P+AA+ L+D AL +P+ +KL+MM GQV + G ARE+Y +G+ +C SIP+W L++ L+E++ Sbjct: 622 QLYLAAVKLEAENEQYHRARPLLAKARNEAGTVRVWMKSAVFERQLGQPDAAIKLLDEALVKFPSAAKLWMMRGQVEEDENGNLAAAREFYAKGVKSCSKSIPLWILSSRLEEKA 736
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Match: A0A1D2AIT5_ORNBR (Pre mrna processing factor 6 (Fragment) n=1 Tax=Ornithodoros brasiliensis TaxID=888526 RepID=A0A1D2AIT5_ORNBR) HSP 1 Score: 103 bits (256), Expect = 4.490e-25 Identity = 56/114 (49.12%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 1 QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEAALTLIDTALPSYPAFSKLYMMAGQVSSKLGQPGRAREYYQRGLSACPGSIPMWRLAACLDEQS 342 ++WLAAVKLE ENN+FERAR LL KA APTA+V MK+ LE L+ A+ L++ L Y F KL+MM GQ+ G AR Y GL CP SIP+W L + L+E++ Sbjct: 97 EIWLAAVKLESENNEFERARRLLAKARSSAPTARVMMKSVRLEWALRDLSQAMELLEEGLKLYSDFPKLWMMKGQILESQGYVEEARGIYNLGLKKCPTSIPLWLLLSRLEERT 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11236.791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11236.791.1 >prot_H-paniculata_contig11236.791.1 ID=prot_H-paniculata_contig11236.791.1|Name=mRNA_H-paniculata_contig11236.791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp QVWLAAVKLEWENNDFERARVLLKKACDRAPTAKVWMKAALLERELKAPEback to top mRNA from alignment at H-paniculata_contig11236:5912..7052+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11236.791.1 ID=mRNA_H-paniculata_contig11236.791.1|Name=mRNA_H-paniculata_contig11236.791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1141bp|location=Sequence derived from alignment at H-paniculata_contig11236:5912..7052+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11236:5912..7052+ >mRNA_H-paniculata_contig11236.791.1 ID=mRNA_H-paniculata_contig11236.791.1|Name=mRNA_H-paniculata_contig11236.791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig11236:5912..7052+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |