prot_H-paniculata_contig11234.790.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11234.790.1
Unique Nameprot_H-paniculata_contig11234.790.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length46
Homology
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: A0A812XB43_SYMMI (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XB43_SYMMI)

HSP 1 Score: 71.6 bits (174), Expect = 1.690e-13
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDA-VLCGTFSRDGEHLATGS 46
            ++VWD DTCRLRKDL YQA+DE MMH++  VLC  F+RDGE LATGS
Sbjct:  199 IEVWDSDTCRLRKDLDYQARDELMMHEEEPVLCAAFNRDGELLATGS 245          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: A0A7S3Y2P2_HETAK (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2P2_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 4.470e-13
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGTFSRDGEHLATG 45
            ++VWD D CRLRKDL YQA+DEFMMH++AVL   FSRDGE  ATG
Sbjct:   63 VEVWDPDGCRLRKDLEYQARDEFMMHEEAVLSCCFSRDGELCATG 107          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: K3WH88_GLOUD (WD40 repeat-containing protein SMU1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH88_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 5.400e-13
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDD--AVLCGTFSRDGEHLATGS 46
            ++VWD++ C+LRKDL YQAKDEFMMHDD   V    FSRDGE LATGS
Sbjct:  239 VEVWDYEKCKLRKDLEYQAKDEFMMHDDERGVTAQAFSRDGEMLATGS 286          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: A0A813CGR5_9DINO (Smu1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CGR5_9DINO)

HSP 1 Score: 67.0 bits (162), Expect = 8.130e-13
Identity = 28/46 (60.87%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGTFSRDGEHLATGS 46
            +++WD DT ++R DL YQAKD+FMMH+DA+LC  FS+DG+ LA+GS
Sbjct:   12 IEIWDPDTLKVRLDLDYQAKDKFMMHNDAILCLAFSKDGDMLASGS 57          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: D7FX60_ECTSI (WD40 repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 2.580e-12
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGT 34
            ++VWDFDTCRLRKDLAYQAKDEFMMHD AVLC +
Sbjct:  240 VEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSS 273          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: A0A7S2WM35_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM35_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.520e-12
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAK---DEFMMHDDAVLCGTFSRDGEHLATGS 46
            ++VWDF+TCRLR+DL YQA    + FMMHD AVL  TFSRDGE LA+GS
Sbjct:  261 VEVWDFETCRLRRDLPYQATPDDERFMMHDKAVLAITFSRDGEMLASGS 309          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: A0A6G0XK62_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK62_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.230e-11
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGTFSRDGEHLATGS 46
            ++ WDFD C L+KDL YQA++EFMMH+D V    FSRDGE LAT S
Sbjct:  234 VEAWDFDKCALKKDLDYQAREEFMMHEDGVSAQAFSRDGELLATAS 279          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: A0A485LFI5_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFI5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.230e-11
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGTFSRDGEHLATGS 46
            ++ WDFD C L+KDL YQA+DEFMMH+++V    FSRDGE LAT S
Sbjct:  236 VEAWDFDKCVLKKDLDYQARDEFMMHEESVTAQAFSRDGELLATAS 281          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: UPI000C9D5DF3 (suppressor of mec-8 and unc-52 protein homolog 1-like n=1 Tax=Cucurbita pepo subsp. pepo TaxID=3664 RepID=UPI000C9D5DF3)

HSP 1 Score: 62.4 bits (150), Expect = 1.420e-11
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGTFSRDGEHLATGS 46
            ++VWD+ + +L+KDL YQA + FMMHDD VLC  FSRD E +A+GS
Sbjct:   28 IEVWDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMIASGS 73          
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Match: UPI000B4F04E8 (WD40 repeat-containing protein SMU1 n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4F04E8)

HSP 1 Score: 65.5 bits (158), Expect = 2.600e-11
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGTFSRDGEHLATGS 46
            ++VW+F T ++RKDL YQA+D FMM DDAVLC  FSRD E LATG+
Sbjct:  238 IEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGA 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11234.790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812XB43_SYMMI1.690e-1370.21WD40 repeat-containing protein SMU1 (Fragment) n=1... [more]
A0A7S3Y2P2_HETAK4.470e-1371.11WD40 repeat-containing protein SMU1 (Fragment) n=1... [more]
K3WH88_GLOUD5.400e-1368.75WD40 repeat-containing protein SMU1 n=1 Tax=Globis... [more]
A0A813CGR5_9DINO8.130e-1360.87Smu1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
D7FX60_ECTSI2.580e-1285.29WD40 repeat-containing protein SMU1 n=2 Tax=Ectoca... [more]
A0A7S2WM35_9STRA3.520e-1267.35WD40 repeat-containing protein SMU1 n=1 Tax=Rhizoc... [more]
A0A6G0XK62_9STRA1.230e-1163.04WD40 repeat-containing protein SMU1 n=1 Tax=Aphano... [more]
A0A485LFI5_9STRA1.230e-1163.04WD40 repeat-containing protein SMU1 n=1 Tax=Aphano... [more]
UPI000C9D5DF31.420e-1158.70suppressor of mec-8 and unc-52 protein homolog 1-l... [more]
UPI000B4F04E82.600e-1165.22WD40 repeat-containing protein SMU1 n=1 Tax=Merion... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..46
e-value: 1.4E-5
score: 26.6
NoneNo IPR availablePANTHERPTHR22848WD40 REPEAT PROTEINcoord: 2..45
NoneNo IPR availablePANTHERPTHR22848:SF2WD40 REPEAT-CONTAINING PROTEIN SMU1coord: 2..45
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..46
score: 8.756
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11234contigH-paniculata_contig11234:7650..7787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11234.790.1mRNA_H-paniculata_contig11234.790.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11234 7650..7787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11234.790.1 ID=prot_H-paniculata_contig11234.790.1|Name=mRNA_H-paniculata_contig11234.790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
LQVWDFDTCRLRKDLAYQAKDEFMMHDDAVLCGTFSRDGEHLATGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf