prot_H-paniculata_contig11233.789.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11233.789.1
Unique Nameprot_H-paniculata_contig11233.789.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length386
Homology
BLAST of mRNA_H-paniculata_contig11233.789.1 vs. uniprot
Match: D8LKM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM2_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 6.280e-120
Identity = 231/386 (59.84%), Postives = 256/386 (66.32%), Query Frame = 0
Query:    1 MMNVHFWFHALSEIPDIIVWIKNGQHLEEDTSVKLFWEGSFLMAVEFYLAFQANGCLILVVVFSVISGLVSIYFLANREEGVTSIGEVRQGLEWVTMFLWILVCLVMAHLTPPADSLRAKALAELVMVSQSGDGQDGAAASANRTQPVIPAGLEEATNDLALQLAASRRKGSLATGTN----GSPIRPGSRQVSVGGGGKSPVSAGASSGNTTNGYGGLQQTMSNGDDDGGPAPNGMASSSDGDNGNGMLRAGGADKTGGAGSGFVDEDGMGEEGREVKDMESRCCCGCWDSFVFWMDRRNTQNNLPVFRLLYFSSTVVYFAVMLGVAAGGIQRGYATAVVGVSFASVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVR 382
            MMNVHFWFHALSEIPDI+VWIK G+ LEEDTSVKLFWEGSFLMAVEFYLAFQ     ILVV+FSV+SG VS+YF+ANRE+GVT +GEVRQGLEW TMFLWI+VCL+MAHLTP   S RAKAL    MV Q+G G D AA + N        GL+EA N+LAL +AA RRKGS A  T+    GSP R   R+ S   GG+                                  NG  + + G+ G  M+R     +                               CWDSF FWMD+RNTQNNLPVFRLLYFSSTVVYF VMLGVAAGGI+RGYATAVVGVSFA VCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVR
Sbjct:  435 MMNVHFWFHALSEIPDILVWIKTGETLEEDTSVKLFWEGSFLMAVEFYLAFQ-----ILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWTTMFLWIVVCLLMAHLTPTVGSGRAKALE--AMVIQNGGGTDSAA-TPNMPPTANAPGLDEAANNLALAMAAERRKGSRAGLTSSPSKGSPPRLSGRKPSTPNGGRXXXXXXXXXXXXXXXXXXXXXXX--------XETNGSTALA-GNEGAEMMRVSTPTRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACWDSFAFWMDQRNTQNNLPVFRLLYFSSTVVYFIVMLGVAAGGIKRGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVR 803          
BLAST of mRNA_H-paniculata_contig11233.789.1 vs. uniprot
Match: A0A6H5K6P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P5_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 2.730e-78
Identity = 208/486 (42.80%), Postives = 237/486 (48.77%), Query Frame = 0
Query:    1 MMNVHFWFHALSEIPDIIVWIKNGQHL-------------------------------------EEDTSVKLFWEGSFLMAVEFYLAFQANGCL--------------------------------------------------------ILVVVFSVISGLVSIYFLANREEGVTSIGEVRQGLEWVTMFLWILVCLVMAHLTPPADSLRAKALAELVMVSQSGDGQDGAAASANRTQPVIPAGLEEATNDLALQLAASRRKGSLATGTN----GSPIRPGSRQVSVGGGG--KSPVSAGASSGNTTNGYGGLQQTMSNGDDDGGPAPNGMASSSDGDNGNGMLRAGGADKTGGAGSGFVD--EDGM---GEEGREVKDMESRCCCGCWDSFVFWMDRRNTQNNLPVFRLLYFSSTVVYFAVMLGVAAGGIQRGYATAVVGVSFASVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVR 382
            MMNVHFWFHALSEIPDI+VWIKNG+ L                                     EEDTSVKLFWEGSFLMAVEFYLAFQANGCL                                                        ILVV+FSV+SG VS+YF+ANRE+GVT +GEVRQGLEW TMFLWI+VCL+MAHLTP   S RAKAL   VMVSQ+G G  G+AA+ N        GL+EA N+LAL +AA RRKGS A  TN    GSP R   R+ S   GG  +                     T +NG           ++   G+ G  M+R     + G          ED +   GE+G + K+ +S                                                  RGYATAVVGVSFA VCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVR
Sbjct:  118 MMNVHFWFHALSEIPDILVWIKNGETLQAKHVVFNVLVLVIVWPWVYIAYRRVLTNLRAKYCGHEEDTSVKLFWEGSFLMAVEFYLAFQANGCLTHAPVGEEAICDNIIHSNLISGMNIILIFLVVRVILFKMGDLTITRTLHLELRPYEILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWATMFLWIVVCLLMAHLTPTVGSGRAKALE--VMVSQNGGG-GGSAATPNMPSTANAPGLDEAANNLALAMAAERRKGSRAGLTNSPSKGSPPRLSGRKSSTPNGGPRQXXXXXXXXXXXXXXXXXXTAATETNG-----------STPLAGNEGAEMMRVSTPTREGXXXXXXXXXXEDWVAVDGEDGDDDKEDDS--------------------------------------------------RGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVR 539          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11233.789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKM2_ECTSI6.280e-12059.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6P5_9PHAE2.730e-7842.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 362..381
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..325
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 351..361
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 382..385
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 326..330
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 331..350
NoneNo IPR availableTMHMMTMhelixcoord: 328..350
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 302..324
NoneNo IPR availableTMHMMTMhelixcoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11233contigH-paniculata_contig11233:478..7941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11233.789.1mRNA_H-paniculata_contig11233.789.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11233 469..7941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11233.789.1 ID=prot_H-paniculata_contig11233.789.1|Name=mRNA_H-paniculata_contig11233.789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MMNVHFWFHALSEIPDIIVWIKNGQHLEEDTSVKLFWEGSFLMAVEFYLA
FQANGCLILVVVFSVISGLVSIYFLANREEGVTSIGEVRQGLEWVTMFLW
ILVCLVMAHLTPPADSLRAKALAELVMVSQSGDGQDGAAASANRTQPVIP
AGLEEATNDLALQLAASRRKGSLATGTNGSPIRPGSRQVSVGGGGKSPVS
AGASSGNTTNGYGGLQQTMSNGDDDGGPAPNGMASSSDGDNGNGMLRAGG
ADKTGGAGSGFVDEDGMGEEGREVKDMESRCCCGCWDSFVFWMDRRNTQN
NLPVFRLLYFSSTVVYFAVMLGVAAGGIQRGYATAVVGVSFASVCSHWLI
SIEHPTSTMEIVHLLLHACTEAISVLLWVSVRCEQ*
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