prot_H-paniculata_contig11084.704.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11084.704.1
Unique Nameprot_H-paniculata_contig11084.704.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length308
Homology
BLAST of mRNA_H-paniculata_contig11084.704.1 vs. uniprot
Match: A0A6H5KJG2_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG2_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.130e-56
Identity = 130/254 (51.18%), Postives = 155/254 (61.02%), Query Frame = 0
Query:    2 DSRDAITLVQVLGGTLEEARAGEISWPDRELVGKWLDRNGKLVPASCSGLCRQLETRLTFSFLPGLSWPG--REAVNAVNAGARPRPGATAAT---AGAIMATSRRNLVGLVPPLDKSTEEALAAAGSAASTGLGTEAFGGGSANAGQVLRSIGRTALEDGNYSSTDDE----------GIARDGFSPGLGSTDVLPSVLEQDTVDVNSLEEADDDFLLCPTPQGIKSYCIIHRTSSRIRTYFRLFLQEQRPYA 240
            +SRDA  L   L  TLE+ARAG++SW DR+ +  WL +N K +P  C GLC +LE RL+FSFLPGLSWPG  +EA+ +  A               +   +   RRNL GL PP+ K+  EA  A   A     G+ +    S  +    R  G    EDGNYSSTDDE          G  RD  S GLGS +VLPSVLEQ TVDV+SL+EADD+FLL PTPQG+KSYCII RT S IRTYFRLFLQEQRP A
Sbjct:   24 ESRDAAALALALRSTLEQARAGQMSWSDRDALLGWLHKNRKSMPTPCLGLCGRLENRLSFSFLPGLSWPGHRQEALPSTAAXXXXXXXXXXXXXXGSAETVVVRRRNLAGLPPPVGKNASEAAEA--DAXXXXXGSSSAASPSYVSPDSKRGKG-AGQEDGNYSSTDDEAGAAGVIGLGGAPRDLVSSGLGSPEVLPSVLEQATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLA 274          
BLAST of mRNA_H-paniculata_contig11084.704.1 vs. uniprot
Match: D8LGZ8_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ8_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 4.350e-38
Identity = 100/245 (40.82%), Postives = 122/245 (49.80%), Query Frame = 0
Query:    2 DSRDAITLVQVLGGTLEEARAGEISWPDRELVGKWLDRNGKLVPASCSGLCRQLETRLTFSFLPGLSWPG--REAVNAVNAGARPRPGATAAT----AGAIMATSRRNLVGLVPPLDKSTEEALAAAGSAASTGLGTEAFGGGSANAGQVLRSIGRTALEDGNYSSTDDEGIARDGFSPGLGSTDVLPSVLEQDTVDVNSLEEADDDFLLCPTPQGIKSYCIIHRTSSRIRTYFRLFLQEQRPYA 240
            +SRDA  L   L  TLE+ARAG++SW DR+ +  W+ +N K +P  C GLC +LE RL+FSFLPGLSWPG  +EAV +    A P            +   +   RRNL GL PP+ K+  EA  A  +A                                                                TVDV+SL+EADD+FLL PTPQG+KSYCII RT S IRTYFRLFLQEQRP A
Sbjct:   24 ESRDAAALALALRSTLEQARAGQMSWSDRDALLGWMHKNRKSMPTPCVGLCGRLENRLSFSFLPGLSWPGHRQEAVPSTAVSAAPXXXXXXXXXXHGSADTVVIRRRNLAGLPPPVGKNASEAAEAEAAA----------------------------------------------------------------TVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLA 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11084.704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJG2_9PHAE2.130e-5651.18Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LGZ8_ECTSI4.350e-3840.82Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11084contigH-paniculata_contig11084:2873..8174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11084.704.1mRNA_H-paniculata_contig11084.704.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11084 2871..8174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11084.704.1 ID=prot_H-paniculata_contig11084.704.1|Name=mRNA_H-paniculata_contig11084.704.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
SDSRDAITLVQVLGGTLEEARAGEISWPDRELVGKWLDRNGKLVPASCSG
LCRQLETRLTFSFLPGLSWPGREAVNAVNAGARPRPGATAATAGAIMATS
RRNLVGLVPPLDKSTEEALAAAGSAASTGLGTEAFGGGSANAGQVLRSIG
RTALEDGNYSSTDDEGIARDGFSPGLGSTDVLPSVLEQDTVDVNSLEEAD
DDFLLCPTPQGIKSYCIIHRTSSRIRTYFRLFLQEQRPYALGSAVPAPST
PTPIGTGGGGGNTGIATGGSSSGVASGVVAATTGVNSGGGGGGIETLKAF
LTSGGTGV
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