prot_H-paniculata_contig1107.693.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1107.693.1
Unique Nameprot_H-paniculata_contig1107.693.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length327
Homology
BLAST of mRNA_H-paniculata_contig1107.693.1 vs. uniprot
Match: W7TN91_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN91_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.340e-21
Identity = 84/272 (30.88%), Postives = 135/272 (49.63%), Query Frame = 0
Query:   55 GSFPRKVSAKSVGRLSDNLAKAKDFYDSWQEGTTKRQQHVHANQSTQSK-----LGVHLGKVSRSNESSTMHRLPLFMKNFLLGTALFSVYEGLDEKLTTTI--------VPELQPNTKVWHGLTKSSVAALAGTSAGACHGTLSFLYESIIENRSLGGSNIKAR-FGGILIAHSLAHGTLFGTYEFVKHSALDMTGTNPSRWGGIAAVAAAGAVAGVAQEAMSYYTTRMERSGICRGLRAA-RRLPLPGLQRIIGSAPGSSLGFLAFEYGR 311
            GSFPR+V  K+V +++D ++ A D Y  ++    +  + +      Q K      G+H  ++      S +   P  +K+  LGTA+F +YE   + L   +              +  V+          ++G  AG CHG L   +E     R +   ++ A  + G  +AHSLAH +LFG++E +K + L +T        G+  V AAG +AG+ +E +S+ T   E+ G+   LRAA +R  LP L+ I  +A  +SLGFLA+EYGR
Sbjct:  119 GSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAV---PHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEH--ARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVS-SLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGR 384          
BLAST of mRNA_H-paniculata_contig1107.693.1 vs. uniprot
Match: A0A7S0XKK1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XKK1_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.690e-7
Identity = 90/357 (25.21%), Postives = 147/357 (41.18%), Query Frame = 0
Query:   11 DSTRDSNGVGAGAARALARQTR-------YIKAVVVRGDTYLARWVSRADIGSFPRKVSAKSVGRLSDNLAKAKDFYDSWQEGTTKRQQHVHANQSTQSKLGVHLGKVSRSNESSTMHRLPLFMKNFLLGTALFSVYEGLDEKLT------TTIVP--ELQPNTKVWHGLTKSSVAALAGTSAGACHGTLSFLYESIIE-------------NRSLGGSNIKARFGGILIAHSLAHGTLFGTYEFVKHS---ALDMTGTN---------PSRWGG-----IAAVAAAGAVAGVAQEAMSYYTTRMERSGICRGLRAARRLPLPGL-----------QRIIGSAPGSSLGFLAFEYGR 311
            D+  +++   AG AR LAR           +  + +R D  +A   ++  I +  R    + V R+SD  +   DF ++ QE  ++                  L K       +T     L  KN +LG A+F+ YE   +K          ++P  E + +TK+W           AG  AG+ H  L    ESI+                ++   N  A F   L+ H+ +H  LFG+YE VK +   AL  T T+         PS   G     + AVA AG  AG+ Q+ +S    +  ++G     ++A++ P+  L           + ++  +  +S+GF+AFEYGR
Sbjct:   16 DAVHENSPESAGLARGLARSAVPKGAGRIAVGRLPLRPDQIIA---TKGRISNPARMAKIQRVARVSDRASTGFDFVEAHQEAKSE------------------LVKKESWGRRATNFAGSL-AKNTILGMAVFATYEEAIDKFAGENQEVLALIPTEETRYSTKLWQHYA-------AGFCAGSVHAGLGSAIESIVNLVWQPLASRFLNSGAAVATPNAAAPFVPNLLHHATSHAVLFGSYETVKRATTLALGTTSTSNTQADTIEPPSEENGFLEGQLVAVALAGGTAGICQQFVSDVAEQAIQAG-----KSAKKKPIGKLLASIQPPRYSAKSLLMLSIPTSIGFVAFEYGR 338          
BLAST of mRNA_H-paniculata_contig1107.693.1 vs. uniprot
Match: A0A7R9ZT87_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZT87_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 8.170e-6
Identity = 70/237 (29.54%), Postives = 98/237 (41.35%), Query Frame = 0
Query:  124 PLFMKNFLLGTALFSVYE---GLDEKLTTTIVPELQPNTKVWHGLTKSSVAALAGTSAGACHGTLSFLYESIIENRSLGGSNIKARFGGILIAHSLAHGTLFGTYEFVKHSALDMTG-------TNPSRWGG--------IAAVAAAGAVAGVAQEAMSYYT---------------------TRMERSGI----CRGLRAARRL------PLPGLQRIIGSAPGSSLGFLAFEYGR 311
            P  +KN +LGT +F VYE   G+ ++         Q +T   H   ++S   +AG  AG  H  L   +E++ ENR+L       +     I HSLAH  LFG+Y  VK+    M            S  GG        I   A AG V+GV Q  +S+YT                     T +  + I      G R+  R       PLP   + + + PG ++ FLAFEY R
Sbjct:   10 PDLIKNTILGTVVFEVYEQSYGIMQQRWN------QEDTSAQHAF-ETSHHCIAGAIAGTSHAFLGLAFETM-ENRALPTFRYTMQSA---IHHSLAHTVLFGSYAGVKYLLESMIAKQHQQRSATTSLAGGDEFLMEYQIGITATAGGVSGVVQNTVSHYTGMWLQVETTEKTMYQQMLANRTAVTAASIDSPAASGSRSIMRSMINSFRPLPPAGQTLLAFPGMAVAFLAFEYAR 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1107.693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
W7TN91_9STRA1.340e-2130.88Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0XKK1_9STRA2.690e-725.21Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7R9ZT87_9STRA8.170e-629.54Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1107contigH-paniculata_contig1107:8911..9891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1107.693.1mRNA_H-paniculata_contig1107.693.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1107 8825..9891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1107.693.1 ID=prot_H-paniculata_contig1107.693.1|Name=mRNA_H-paniculata_contig1107.693.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp
MESSRHTETNDSTRDSNGVGAGAARALARQTRYIKAVVVRGDTYLARWVS
RADIGSFPRKVSAKSVGRLSDNLAKAKDFYDSWQEGTTKRQQHVHANQST
QSKLGVHLGKVSRSNESSTMHRLPLFMKNFLLGTALFSVYEGLDEKLTTT
IVPELQPNTKVWHGLTKSSVAALAGTSAGACHGTLSFLYESIIENRSLGG
SNIKARFGGILIAHSLAHGTLFGTYEFVKHSALDMTGTNPSRWGGIAAVA
AAGAVAGVAQEAMSYYTTRMERSGICRGLRAARRLPLPGLQRIIGSAPGS
SLGFLAFEYGRLVASELVEDVENQTH*
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