prot_H-paniculata_contig1106.687.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1106.687.1
Unique Nameprot_H-paniculata_contig1106.687.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length267
Homology
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: A0A6H5JQM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM1_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.210e-21
Identity = 166/269 (61.71%), Postives = 189/269 (70.26%), Query Frame = 0
Query:    4 GSPSLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEMSVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPHLSDVDLTENRMPEGRLQGQTLQAWRESSRRR------GSIST-------------------------------NSQAILEKLLFKDDEIKLLRQENEMLKR 235
            GS   DRE LL LYWS+GGPRW+R QGWA    DL  W+GV   + GRVV+LDL RN L GTIPAA+G L ++    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P L+D+DLTENR+  GRL+G+ L  W+E++R+R      G++S                                N Q  L+ ++ KD EI  LR ENE L+R
Sbjct:    5 GSEQQDREALLALYWSSGGPRWSRNQGWASNDADLGNWHGVMCKD-GRVVRLDLDRNGLVGTIPAALGGLTKVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQLTDLDLTENRVEAGRLKGKGLMEWKEAARQRLIDSQSGTVSWQHGAAGPSPRATXXXXXXXXARDAAAHRPSFNVQEYLDNMMAKDREIAELRAENERLRR 272          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: D7FQH2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH2_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.110e-20
Identity = 44/70 (62.86%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    4 GSPSLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSL 73
            GS   DRE LL LYWS+GGPRWTR QGWA    D+  W+GV     GRVV+LDL+RN L GTIPAA+G L
Sbjct:    5 GSEQQDREALLALYWSSGGPRWTRNQGWASNDADMGSWHGVTCKN-GRVVRLDLNRNGLVGTIPAALGGL 73          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 5.320e-14
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    7 SLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEMSVL 79
            S DR+ L+ L+ STGG  WTR+  W   + D + W+GVKVN+ GRVV +DL  NNL G IP  +G+L +++ L
Sbjct:    3 SKDRDALVALFCSTGGAGWTRRDNWNTDA-DRATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASL 74          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 5.820e-14
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    7 SLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEMSVL 79
            S DR  L+ L+ STGG RW R   W +   DLS+W GV VNE GRVVKLDL  NNL+G IP A+G+L+E++ L
Sbjct:    3 SEDRAALVALFRSTGGTRWDRNNKW-DTDADLSQWSGVHVNEDGRVVKLDLFYNNLEGRIPEALGALQELTHL 74          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 7.860e-14
Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    7 SLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEMSVLR 80
            S DR  L+ L+ S GG RW R + W  G+ DLS+WYGV V   GRVV+L LS NNL+GTIP A+G L E+  LR
Sbjct:    3 SEDRAALVALFRSAGGTRWHRNKNWDTGA-DLSQWYGVHVKHDGRVVELWLSSNNLEGTIPEALGVLTELKYLR 75          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 8.130e-13
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    9 DRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEM 76
            DR+ L+ LY +TGG  W   Q W +   DL  W+GV VN+ GRVVKL L  NNL+G IPA +G L  +
Sbjct:    5 DRDALVALYRATGGENWRESQNW-DTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANL 71          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 9.370e-13
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    7 SLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSL 73
            S DR+ L+ L+ +TGG  WTR+  W   ++ L  W GVKVNE GRVV+LDLS NNL GTIP  +G L
Sbjct:  189 SPDRDALVALFHATGGDNWTRKSNWCTSAK-LGTWKGVKVNEEGRVVELDLSDNNLRGTIPVELGKL 254          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: UPI00142F73BA (T9SS type A sorting domain-containing protein n=1 Tax=Maribellus sediminis TaxID=2696285 RepID=UPI00142F73BA)

HSP 1 Score: 77.8 bits (190), Expect = 1.890e-12
Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    5 SPSLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEMSVL 79
            SP  D   L+ LY +T GP WT   GW  G  D   WYG+ +NE GRV  +DL+ NNL GT+P  +G L E+  L
Sbjct:  253 SPDQDSVALVALYNATNGPDWTNNTGWTTGPLDT--WYGITLNEAGRVTTIDLNNNNLTGTLPEEIGQLSELQSL 325          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: A0A2A2G600_9BACT (Two component regulator three Y domain protein (Fragment) n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2G600_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 1.980e-12
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    4 GSPSLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEMSVL 79
            GS S DR+ L+ LY +TGG  W    GW  G    S W+GV+V+  GRVV+LDL +N L G +P+ +G+L +++ L
Sbjct:   26 GSVSGDRQALMDLYSATGGDSWANNSGWGSGDPSGS-WHGVEVDANGRVVRLDLWKNGLQGQLPSTIGNLTKLTYL 100          
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Match: A0A6B0WES6_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B0WES6_9CHLR)

HSP 1 Score: 76.6 bits (187), Expect = 4.100e-12
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    4 GSPSLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELGRVVKLDLSRNNLDGTIPAAMGSLEEMSVLR 80
            G    DRE L+ LY +TGGP W     W      L +WYGV  +  GRVV+L+LS N+L G +PA +G L E+  LR
Sbjct:  360 GDAGTDREALVALYHATGGPNWRNDANWLS-DEPLRRWYGVTTDSGGRVVRLELSSNDLSGELPAELGQLSELQWLR 435          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1106.687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQM1_9PHAE3.210e-2161.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQH2_ECTSI1.110e-2062.86Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KQQ0_9PHAE5.320e-1447.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH90_ECTSI5.820e-1456.16Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
D7FHA3_ECTSI7.860e-1455.41Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE8.130e-1350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPS8_ECTSI9.370e-1355.22Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
UPI00142F73BA1.890e-1246.67T9SS type A sorting domain-containing protein n=1 ... [more]
A0A2A2G600_9BACT1.980e-1244.74Two component regulator three Y domain protein (Fr... [more]
A0A6B0WES6_9CHLR4.100e-1245.45Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..243
NoneNo IPR availablePANTHERPTHR27008:SF206coord: 94..194
coord: 52..127
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 94..194
coord: 52..127
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 13..183
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 52..110
e-value: 1.5E-8
score: 34.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 7..216
e-value: 2.2E-46
score: 159.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1106contigH-paniculata_contig1106:2659..14898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1106.687.1mRNA_H-paniculata_contig1106.687.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1106 2550..15882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1106.687.1 ID=prot_H-paniculata_contig1106.687.1|Name=mRNA_H-paniculata_contig1106.687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=267bp
MVRGSPSLDRECLLCLYWSTGGPRWTRQQGWAEGSRDLSKWYGVKVNELG
RVVKLDLSRNNLDGTIPAAMGSLEEMSVLRLGGNSLTGPIPAALGNLLEL
TYLDLRSNQITGSIPADLGKMTEMAKLDLSCNLLSGPIPPELGGMHNLML
LWLEKNHIEGPIPPELANIPHLSDVDLTENRMPEGRLQGQTLQAWRESSR
RRGSISTNSQAILEKLLFKDDEIKLLRQENEMLKRENESLSDSRIAPSSR
GSGISKGLNGFFKLRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf