prot_H-paniculata_contig10740.470.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10740.470.1
Unique Nameprot_H-paniculata_contig10740.470.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig10740.470.1 vs. uniprot
Match: A0A836CB09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB09_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.620e-25
Identity = 45/81 (55.56%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 VCQGWVVFKVRSVGDGRIRRAISEAFCIAYGLQAAALLRAQLAEPDSHTLWNTVGCVSFASLSLFYGYCRWFKTIKVFELP 81
            + QGW+    R  GD R++RA+SEA+ ++YGLQ  AL RAQ   PDSHT  N  G   FASLS FY Y RW +TIK+FELP
Sbjct:   69 LAQGWLTHATRQAGDARVKRAMSEAYAVSYGLQMLALARAQWTSPDSHTALNIAGIALFASLSAFYAYVRWRRTIKIFELP 149          
BLAST of mRNA_H-paniculata_contig10740.470.1 vs. uniprot
Match: A0A024TE78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TE78_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.910e-21
Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    1 VCQGWVVFKVRSVGDGRIRRAISEAFCIAYGLQAAALLRAQLAEPDSHTLWNTVGCVSFASLSLFYGYCRWFKTIKVFELP 81
            + QGW+V+K R VGD  IR+   +A+C+ + LQAAAL+RAQ++ P+SH++ N V  +  A+L   YGY   FKTIKVFELP
Sbjct:   78 LAQGWLVWKTRLVGDALIRKTFCQAYCLCFLLQAAALVRAQVSSPESHSVLNWVNIIVLAALGAAYGYFVVFKTIKVFELP 158          
BLAST of mRNA_H-paniculata_contig10740.470.1 vs. uniprot
Match: A0A8J5ITE1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5ITE1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.620e-20
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    1 VCQGWVVFKVRSVGDGRIRRAISEAFCIAYGLQAAALLRAQLAEPDSHTLWNTVGCVSFASLSLFYGYCRWFKTIKVFELPG 82
            + QGW+V++ R V D  IRR   +A+CI + LQA ALLRAQ+A P+SH++ + +  +  +SL   YGY   FKTIK FELPG
Sbjct:   55 LAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQMASPESHSMLHWINILLLSSLGCAYGYFLVFKTIKAFELPG 136          
BLAST of mRNA_H-paniculata_contig10740.470.1 vs. uniprot
Match: G4YMX6_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YMX6_PHYSP)

HSP 1 Score: 87.0 bits (214), Expect = 5.970e-20
Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 VCQGWVVFKVRSVGDGRIRRAISEAFCIAYGLQAAALLRAQLAEPDSHTLWNTVGCVSFASLSLFYGYCRWFKTIKVFELPG 82
            + QGW+V++ R V D  IRR   +A+CI + LQA ALLRAQLA P+SH++ + V  +    L   YGY   FKTIK FELPG
Sbjct:   60 LAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQLASPESHSMLHWVNILLLGGLGCAYGYFLVFKTIKAFELPG 141          
BLAST of mRNA_H-paniculata_contig10740.470.1 vs. uniprot
Match: W2G8X2_PHYPR (Uncharacterized protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=W2G8X2_PHYPR)

HSP 1 Score: 85.9 bits (211), Expect = 1.650e-19
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 VCQGWVVFKVRSVGDGRIRRAISEAFCIAYGLQAAALLRAQLAEPDSHTLWNTVGCVSFASLSLFYGYCRWFKTIKVFELPG 82
            + QGW+V++ R V D  IRR   +A+CI + LQA ALLRAQ+A P+SH++ + +  +    L   YGY   FKTIK FELPG
Sbjct:   59 LAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQIASPESHSMLHWINILLLGGLGCAYGYFLVFKTIKAFELPG 140          
BLAST of mRNA_H-paniculata_contig10740.470.1 vs. uniprot
Match: A0A7R9ZDI3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZDI3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.680e-11
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 0
Query:    4 GWVVFKVRSVGDGRIRRAISEAFCIAYGLQAAALLRAQLAEPDSHTLWNTVGCVSFASLSLFYGYCRWFK---TIKVFELPGTRG 85
            GW++ ++RSV DGR RRA+ EA C  Y LQ+ A+LRAQ  +  +   W  +       +   YG  R+ K    IKV+ELP + G
Sbjct:   38 GWIILRLRSVDDGRFRRAVCEALCACYALQSLAVLRAQFTDRANTINW--IAITVLVGVGACYGRFRFGKGGELIKVYELPTSAG 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10740.470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836CB09_9STRA5.620e-2555.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A024TE78_9STRA6.910e-2151.85Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A8J5ITE1_9STRA2.620e-2050.00Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
G4YMX6_PHYSP5.970e-2051.22Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
W2G8X2_PHYPR1.650e-1948.78Uncharacterized protein n=15 Tax=Peronosporaceae T... [more]
A0A7R9ZDI3_9STRA2.680e-1140.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..49
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10740contigH-paniculata_contig10740:1372..2164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10740.470.1mRNA_H-paniculata_contig10740.470.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10740 79..2164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10740.470.1 ID=prot_H-paniculata_contig10740.470.1|Name=mRNA_H-paniculata_contig10740.470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
VCQGWVVFKVRSVGDGRIRRAISEAFCIAYGLQAAALLRAQLAEPDSHTL
WNTVGCVSFASLSLFYGYCRWFKTIKVFELPGTRG*
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