Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 577 |
| Cds size | 336 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9542.17265.1 >prot_H-paniculata_contig9542.17265.1 ID=prot_H-paniculata_contig9542.17265.1|Name=mRNA_H-paniculata_contig9542.17265.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp
MRFARLGCVNLALLSFLLLGVFTRTHGEGDGDGQEDNAGNENPVSRQETP
QADVNVIDEATATYFYVKDEGKPRDKLPRRCFVLTQPGGTQFHVHYHFEA
AKVAGNEARTE* back to topmRNA from alignment at H-paniculata_contig9542:5536..8250- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9542.17265.1 ID=mRNA_H-paniculata_contig9542.17265.1|Name=mRNA_H-paniculata_contig9542.17265.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2715bp|location=Sequence derived from alignment at H-paniculata_contig9542:5536..8250- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTTTTCTTGTTGCTTTCTCAGCGTCCTTCTGAGTGGAGGAAGACTACGA
TAATAATGCGTTTCGCTAGACTGGGATGCGTCAACTTGGCCTTGCTTAGC
TTTCTCCTTCTCGGCGTGTTCACTCGGACACATGGGGAGGGTGATGGTGA
TGGCCAGGAAGACAATGCGGGCAACGAGAACCCCGTCTCTCGACAGGAGA
CGCCGCAGGCGGATGTCAATGTGATCGATGAAGCAACGGCCACGTACTTT
TACGTGAAGGACGAGGGCAAGCCAAGGGACAAGGTTAGTGTTTTATTATT
TTATCATTGGGACCATTCAAAGATTTTAATTTTTGTAAGGGATTTGGGGG
GGGGGGGGTAGGGGGGTAGGGGGCTTACTTTGTTTATTTATTTTACTCAA
ATCAACGAATATTCCGAATCTAAAACGACTGCAACAACAATACCTTGCTG
TATCAATCCCTATGGCAGAGGTACCCTTAATAGTATTATTAATAATAGTA
ATATAGGAACCTGACGGTCCCTCAGCAAAAAAGAAGCACGAGGGGGGGGA
GGGGTCCAAATCAAACGAGGAGAATTTCATCAAAAACACGTTTCATGGCC
CTGATCCCTTCATCTTGGCAGAGACTGTGTGGATGTGTTTTCTATTTTGT
GCAGCGCATCATTTCTAGGCAGGGATTTTGTGTTGGGGCTATACGGGCTG
TACAGGGTCCGGTGTCATAGCTACTACTACTGTCGATCATAATAATCACT
CCCTCGCCATATCTCAAGAAGTACGACGAGTTTTTTAATGCGTATTTTTT
TTACCCATGCCGTGAGTATACGCAGAAACAAATACTACTCAAGTTGTTGT
CGAAAATATTGAAAAACCAGAGAAGTTACAAAGCCAAAATACTGGATTTT
TCTCCCATAAGACAAGAGGGTTTTCGGGCAATATCTTGGCGTAGTCAAAA
GAAAAAGGATAGCAAAAAAACAATCGAAATGTTGTAGTGATGGATATCCT
TGAAATTTACACTGTGTTCTAGAGTATGACAAAAAAAGAGGGTCAAAGGA
CAATTTCGAACGCCATTCCGATGCTACGTACGTCTAAATTTTTTATGTCG
ATATTTTTACCAGTGCCGTGAGTGCCCATTTTTTTTTTTTTCTCGAGTTG
TCGAAAAATTTGGAAAACCAGGCAGTTACAAATCAAAAAGCTGGATTTTT
ACCCCATGGGAATTTCGGGTTTTCGGGCAATATCTCTATACAATCACCAA
AGAAAAAGACAAAGCGATACAAGGTTTCCTCGGCGTAGCCAATAAAAGAA
GGAAAGAAAACCAATTATAATAATGTTAAAAAATCCATTGAATTGATGGA
TATCCTTCAAATCTAGACTGTTCTAGAGTATGACAAAAAACGGCGGCTGC
AACAATGTACAGATTGAGCTCTGCAGACTGAATCTCCAAAAGCCCTACAT
AAATCTCTCTGCCTGGTCTTGAGGAAGGCCTCCACCAAATCTTACATCAA
CCCACGCGCTAGTGCAAAATATCTTCAAAGTTTGGGGGAAGTACGGTCGT
TGAGTGGCGGTGGCGTGTTTTTTGGAGTGTAACGTTTTGAAAATGTAACG
GTTTTGAAGTTATGTTGCCACCGTTGGAAGCGTCAGATCGTACGCTCTCT
GGAAATATCTACATTGGCGCATACAAATTGTGCTATGAGAAGTTACAGCC
GAATTAGTATATACGTTGTGGGCCCAAAATGACGCATTTTCTATGCATGC
GAAAGCGGCTCTGTTTAGTGAGATATAGGGAGTGAAAAAGCTTTTCCTAT
ACTCGTAGCGACCAGTCGGTTGGAATCGCTGCCCGGAGGATTTGGCCCCT
AATTATCCTACCTTCGTAAACTGTATCTTAGCTACCAACAAGCGATGCAT
TCGTAAAGCTGCATGTTAACCTATGTTACTTACTGGCCATGAGTGGTGAA
TATGTGGATGAGCAGTGAGAATACATAGAGGCTTTTCACGCACAATGTTT
TTTTACTTTTTGTTGTTATCGTCACCCCCCCCCACCAAACACTTTCAAAG
CATCTTTAATTGCTTGATTATATTGGAAAAACGTCAAGTCATCTAGGTTC
AATAAATTATGTATTTATCTGTAGAGGACAGAACGTTTTCATCTGCAATG
TGAGCAAATATTACACCTACCGTCATATGATGTGTGTGTGTGTGTGTGTG
TGTGTGTTTCGCAGTGAACCCTGGTATGTACCGGTTCGTGGTCGGTCAAC
GGTGAGACTTTGCCGGCCATGCGAATGCTTGGAATATTCGCAGGTGCCAT
ACGGGCATTTTTTTTGTCTCGTACGTTTGTTTTTTTGATGTCTGGTAGCC
ACCCTTGAGTTCAACGATTTCTCACCGCACGGTCGTCGTCATGTTATGTC
TTGATTGCCGCGCAAGTATAGCTGCCAAGGCGATGCTTCGTCCTGACGCA
GCCAGGAGGAACTCAATTTCACGTGCATTACCACTTCGAGGCGGCAAAAG
TTGCAGGGAACGAGGCAAGGACCGAGTGAAGAGCATGGGGAGGGTGCTCG
TGTATGTATAGTTTTGGTTAGTCCACCCTCACCAACACCTCCCCGCAAAA
TGAAGTCCTCATTCATCACCCCCGTCCAATTTCGTCAAACTTTCAAACTT
TTCGAGATTTGAAAACGGAATCCGTTTTGTGTATCTAGTTGGGGCAGGTG
GACTCGGGATCGGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig9542:5536..8250- >mRNA_H-paniculata_contig9542.17265.1 ID=mRNA_H-paniculata_contig9542.17265.1|Name=mRNA_H-paniculata_contig9542.17265.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig9542:5536..8250- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTTTCGCTAGACTGGGATGCGTCAACTTGGCCTTGCTTAGCTTTCT
CCTTCTCGGCGTGTTCACTCGGACACATGGGGAGGGTGATGGTGATGGCC
AGGAAGACAATGCGGGCAACGAGAACCCCGTCTCTCGACAGGAGACGCCG
CAGGCGGATGTCAATGTGATCGATGAAGCAACGGCCACGTACTTTTACGT
GAAGGACGAGGGCAAGCCAAGGGACAAGATGCGTTTCGCTAGACTGGGAT
GCGTCAACTTGGCCTTGCTTAGCTTTCTCCTTCTCGGCGTGTTCACTCGG
ACACATGGGGAGGGTGATGGTGATGGCCAGGAAGACAATGCGGGCAACGA
GAACCCCGTCTCTCGACAGGAGACGCCGCAGGCGGATGTCAATGTGATCG
ATGAAGCAACGGCCACGTACTTTTACGTGAAGGACGAGGGCAAGCCAAGG
GACAAGCTGCCAAGGCGATGCTTCGTCCTGACGCAGCCAGGAGGAACTCA
ATTTCACGTGCATTACCACTTCGAGGCGGCAAAAGTTGCAGGGAACGAGG
CAAGGACCGAGTGACTGCCAAGGCGATGCTTCGTCCTGACGCAGCCAGGA
GGAACTCAATTTCACGTGCATTACCACTTCGAGGCGGCAAAAGTTGCAGG
GAACGAGGCAAGGACCGAGTGA back to top
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