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Homology
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: D8LQ38_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ38_ECTSI) HSP 1 Score: 150 bits (380), Expect = 8.030e-35 Identity = 79/169 (46.75%), Postives = 109/169 (64.50%), Query Frame = 3
Query: 2637 VLRNVTGLMGAMLALIVMLNVINRCQNRRRSKKLEQSIFTLPCYVY-PSREKRAEAMREARGRLRAPLDVARDIDLEEQASDGEASDDS----------------NMVSP-SCTICLSVYENEEVIKVLPCGHDFHAECLDPWLQLKATCPLCKTQPFIKAKERSRRGH 3089
+ +N+TG++GAM+ + ++LNV NR NRRRS+KL++SIFTLP YVY S +RA+A R AR +L+APLD ++ I+ A + SP +C ICL+ Y+ EEVIKVLPCGHDFH++CLDPWL++KA CPLCK F K+++R H
Sbjct: 29 IFKNITGILGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYNSSTRERAKAARTARPQLQAPLDSSQGIEDVGSARSSXXXXXXXXXXXXXXXXXXXXXXDSASPITCAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAH 197
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: A0A4S8ICW5_MUSBA (RING-type domain-containing protein n=2 Tax=Musa TaxID=4640 RepID=A0A4S8ICW5_MUSBA) HSP 1 Score: 75.1 bits (183), Expect = 1.390e-11 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 3
Query: 2895 DSNMVSPSCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPF 3056
D + C+ICLS YE+ +V++VLP CGH FH +C+DPWL+L+ TCPLC+T P
Sbjct: 93 DEGGAASRCSICLSEYEDADVLRVLPDCGHLFHLKCVDPWLRLRPTCPLCRTSPL 147
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: A0A835HCR3_9MAGN (RING-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HCR3_9MAGN) HSP 1 Score: 74.3 bits (181), Expect = 2.440e-11 Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 3
Query: 2919 CTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPF 3056
C+ICLS YEN ++++VLP CGH FH +C+DPWLQL+ TCPLC+ P
Sbjct: 100 CSICLSDYENTDMLRVLPDCGHLFHEKCVDPWLQLRPTCPLCRKSPI 146
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: A0A444E142_ENSVE (RING-type domain-containing protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444E142_ENSVE) HSP 1 Score: 73.6 bits (179), Expect = 4.750e-11 Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 3
Query: 2895 DSNMVSPSCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQP 3053
D + C ICLS YE+ +V++VLP CGH FH C+DPWL+L+ TCPLC+T P
Sbjct: 93 DEGGAASRCPICLSEYEDADVLRVLPECGHLFHLNCVDPWLRLRPTCPLCRTSP 146
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: A0A2P5G1E6_TREOI (43kDa postsynaptic protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5G1E6_TREOI) HSP 1 Score: 73.9 bits (180), Expect = 5.710e-11 Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 3
Query: 2862 EEQASDGEASDDSNMVSPSCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPFIKAKERS 3077
E + G+ S ++ +C++CL+ Y+ +V++VLP CGH FH C+DPWL+L+ TCPLC+ P + A S
Sbjct: 77 ESRGGGGDCSRAADKAFSTCSVCLADYQGSDVLRVLPDCGHVFHVRCVDPWLRLRPTCPLCRNTPNVAASVES 149
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: A0A1J7HEV8_LUPAN (RING-type domain-containing protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7HEV8_LUPAN) HSP 1 Score: 73.2 bits (178), Expect = 7.820e-11 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 3
Query: 2898 SNMVSPSCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPF 3056
S+ + CTICLS Y ++I+VLP C H FH +C+DPWL+L TCP+C+T PF
Sbjct: 98 SDSTATCCTICLSDYMGSDMIRVLPDCDHQFHLKCIDPWLRLHPTCPVCRTSPF 151
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: UPI0005278723 (RING-H2 finger protein ATL70-like n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI0005278723) HSP 1 Score: 73.2 bits (178), Expect = 7.820e-11 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 3
Query: 2910 SPSCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPFIK 3062
S SC+ICL YE +V+++LP CGH FH EC+DPWL+L ATCP+C+ P +
Sbjct: 99 SCSCSICLGEYEESDVLRLLPECGHFFHMECVDPWLRLHATCPVCRKSPVAQ 150
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: A0A8J5F8E6_ZINOF (RING-type domain-containing protein n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F8E6_ZINOF) HSP 1 Score: 73.6 bits (179), Expect = 9.050e-11 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 3
Query: 2898 SNMVSPSCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPF 3056
S + C+ICLS Y+ +V++VLP CGH FH C+DPWL+L+ TCPLC+T P
Sbjct: 120 STPAAACCSICLSDYKESDVVRVLPECGHVFHLRCVDPWLRLRPTCPLCRTSPL 173
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: A0A7N2RD72_QUELO (RING-type domain-containing protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2RD72_QUELO) HSP 1 Score: 72.0 bits (175), Expect = 1.070e-10 Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 3
Query: 2901 NMVSPSCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPFIKAKERSR 3080
N VS SC+ICL Y++ +V+++LP CGH FH +C+D WL+L ATCPLC+ P + +R
Sbjct: 83 NSVSSSCSICLGDYKDTDVLRLLPDCGHLFHLKCVDSWLRLHATCPLCRKSPLDEVASSTR 143
BLAST of mRNA_H-paniculata_contig584.13444.1 vs. uniprot
Match: S8C9B8_9LAMI (RING-type domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C9B8_9LAMI) HSP 1 Score: 71.6 bits (174), Expect = 1.160e-10 Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 3
Query: 2916 SCTICLSVYENEEVIKVLP-CGHDFHAECLDPWLQLKATCPLCKTQPF 3056
SCTICL+ Y N +VI+ LP CGH FH C+DPWL+L TCP+C+T P
Sbjct: 80 SCTICLADYRNADVIRRLPKCGHLFHVTCIDPWLRLHPTCPVCRTPPL 127
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 154.5 |
| Seed ortholog evalue | 1.1e-34 |
| Seed eggNOG ortholog | 2880.D8LQ38 |
| Preferred name | TTC3 |
| KEGG ko | ko:K15712 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010721,GO:0010769,GO:0010771,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0022008,GO:0022603,GO:0022604,GO:0030154,GO:0030163,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051128,GO:0051129,GO:0051239,GO:0051241,GO:0051603,GO:0051960,GO:0051961,GO:0060284,GO:0065007,GO:0070013,GO:0070647,GO:0070936,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:2000026 |
| EggNOG free text desc. | ubiquitin-protein transferase activity |
| EggNOG OGs | KOG0800@1,KOG0800@2759 |
| Ec32 ortholog description | Zinc finger, RING/FYVE/PHD-type |
| Ec32 ortholog | Ec-26_006260.1 |
| EC | 2.3.2.27 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko04121 |
| Exons | 4 |
| Model size | 5774 |
| Cds size | 1236 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig584.13444.1 >prot_H-paniculata_contig584.13444.1 ID=prot_H-paniculata_contig584.13444.1|Name=mRNA_H-paniculata_contig584.13444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=412bp
MCNLCLEVQQVLRNVTGLMGAMLALIVMLNVINRCQNRRRSKKLEQSIFT
LPCYVYPSREKRAEAMREARGRLRAPLDVARDIDLEEQASDGEASDDSNM
VSPSCTICLSVYENEEVIKVLPCGHDFHAECLDPWLQLKATCPLCKTQPF
IKAKERSRRGHSHGNGQSQAHVAAESGQPATQASVHPRRGQALLREPPFV
AGPRDMVDGGVARVGVVNGGVNLGVGLILPEGTEECAGGRGEERNEILMD
GGKAAGVIGEDGITVTAQQQQQEDDNDEEDGLGSEELAGGAEGVVECDNV
DDSIQKKPGHDTEVKIRDAGNDDVAVAVRTAAAAAAAVDEPEVSVGNATG
PAREMTRIVGDDRQLGHAGLRNTMEGSDNGDAAGRFVKVAKQEGKLGRVG
VGAPFQTSTPR* back to topmRNA from alignment at H-paniculata_contig584:24121..33443- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig584.13444.1 ID=mRNA_H-paniculata_contig584.13444.1|Name=mRNA_H-paniculata_contig584.13444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9323bp|location=Sequence derived from alignment at H-paniculata_contig584:24121..33443- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAAAAACAAACAGAATCTGAAAGCCTGGTTACTACTGTACAGGAATTAC
GTTATCACTCACGTTCTCATGCCGCCCAGTGTTGCGCCTGAGAGAGTTGG
TTTTTATCAGCACTCCCTCCGAAAAATAGCATGTTGCGACATCAGTTATC
TTGGGGAAGCTACAAAACCTCGCGAGAAGTGATACACAGCACGAGGTAGG
TCACCCATGTACAATTCTACATCTTCGAAGAAGTTTGGCGGTGTTTGATC
CGTCTCAGCGAACAAAAGACTTCATGTGTGCACGAGGAAATTGCCAACAA
CATCGATGCCTCGTTTTTTTTCTCAACGCTCCCCAGACTCGCGGTTGTTC
AGGACCGGTAATCCCGGATATTTCGCGTTATCCTCAAGTGGCCAAAGTCA
TTTCTGTCGTGAGAGGTGTAGCATCGTACATATAATCGGAATCCTCGTGA
AACAATAATTCTATGTCCCGCACTTCATAACATGTTCGGAAGTTCATCAG
GGATCTTCACGAAGGTGTTACTTCTGATACATGTTCCTTGTTTTTTTCGT
CGAGGTGAAGTACAAAATATTGCGAATGATACAATATTTTTTTCGTCATT
TATTTTGAAAGCTAGACTCCTAAAAATCCACAATATTATATATGGTGTCA
TCTGAATTTCCTGTATTCAACGAAGCGCCAACAACCGAATGTCCGCTGTA
ATTTGGTGCTGTAGCAATACCCACGCAATATTGCAATTACCTTTATCATG
TATACTTTGCCTGGCGAACTACTGCATTATCTTGAACGTTGCGGCAAGCC
ATCCGCTTTCAGGCGTGTGAGAAGCACCTACGCTTGCTCTTCATCGAGAC
CTTTGCCCAACGTTTTGATGCGACTGCTCTCCCTCTGTTGTGTGTGCGTA
TGTTCGTTCCATCGACTCTGACAAAAATCTGCCTTTTGTGGTAGTTGCAT
CTCGGTTCGTTGGTTCCTCTCTTGACTCTATCAAAGTCAGCGCTGCCAGA
CATATATGCCTTGATATAGTTCGCAGCATACAATCCTGGGTGTCTATGCT
CAAAGCTGAGGTCAATCTTCTAAGCGGCGGTGGTCGCAAAGCTGGGTCGT
CTGGGGACGATGTGGAGAAACGATTGGATAATGACAATTGTGCCATCGGG
TAATGATCATTGTATGCGTCGTGCGAAGAAATAGGTCAAACAGACACTTC
TCATGTCCGGTTTTTATCTCTCGTGGCTATTCGAAGTGCAGCCCATGCAA
GGTTTTATTGTGAAGCTAACATCACAACCTTCTTCGGAAAAGTGCGGAGA
AGTTACTTTTTCGATTGTTTTGGACAGGAGAAAGGTGCTGTGTTTTGGGT
GCCAAAGGCCGAAAGCCCAAAAGGCACAAAACAAACAATGTTGGTGCTTT
AGAAGTTGGTTGTGAGATCCTTAGTTCAGCATCGATTGCACCAGCAAAGG
TCGGTAGCCATGACAGATGAAATATATCAAATAACTCCTTACGATACAAG
TGATTTCCGCCACTTTTCGTCTGACTTGCCTGTTAGCGGCGCGCAGCGCA
GTGTGCGTTGGTAGGGCGTACACATAACTTAAAACTGCATTTGCTGAAGG
GTAATTGAACGGAAGCGCTGCTCATTTAATCTCAGCCGGGAATATATAGC
AACGGCTTATCTGAAATATGTAAAGGAGTGGTTATTGCAGAGGCAGTGGT
GTCGGTGATCGATGAGGAGGTAGTGCAGCTGACGAACTACAAAACACACA
TGGCTTCGATCGAGCGGTGACAGCCAGCAGGACTGAGAGTGAACAGAGAA
TAGACATTGAAGTAATTGTTTGTTGTGTATGGCGATGAAATAAACAGAGA
GTCATCGGCTGTGACCTGCAGCATCACAGCAATGCGTTTTGTTTGCACGT
GCTGTTTTGCTACGGTTGCTGCAAATATTGAGGATTGAGCATTGAAACGA
GCCGTAAAGACGTGGGCAGGTAGAAGTATTACCCCAGAGATTCGCAGTCG
TTGCCACGGTACAGTACAGTATGGTGTGTATAGTACAGCAGCAGGTAGCA
GACTACTCTGAAGTCGTCACAGGTGGAACATACTGACAATGCATGTCCAC
AGGAGATACGGTATTCATGTTCTATTGTCCCGTGCTCACGTAATCAAGCC
GTTGAACTTGCTTCAAATAAACTGTTCCAACGGTCAATTATCGCATGACC
AAGTATGTCCAACTTGGGGATTTTCGCGATAAAACGGTTGGCGGCGATAG
GTATGTTCGGTTGAAATACAGCGAATTAATTTCATGCTTGTGATCGGCCA
ATATCCATGTAATGGCTGGAATCTCTTGGTCACAATGTCACAATCCAGCA
CTACGCGGTCACCCCCCTATTGAGTACGTAGTTGAAGACTGTTGTGACGT
GAGCGCGTTGAGTAGTAGAGGTTTCGACCATGATCCCGATTTTCTGGGAG
CAACAGTTTTGCCACACGAGTCGTCGCGGTCTGTTGAGTTAGCTCTAGTT
CCCTCACCCTGATTAGTCCCCTCAAGCTAACCCGTAAGTGCTTGTTTTGC
TCTGCTTGCGTGCTTGCGTGCTTGCGACTGACTGCGCTGAACCTGAAACT
CGTCCCATGTGCAACCTCTGTCTGGAAGTGCAGCAGGTTCTCCGTAACGT
AACGGGCCTAATGGGAGCGATGTTGGCGCTCATAGTGATGCTGAACGTGA
TAAATCGCTGTCAAAACCGACGTCGGAGCAAGAAGCTCGAACAGTCTATT
TTCACGCTGCCGTGCTACGTTTATCCTTCGAGAGAGAAAAGGGCGGAGGC
GATGAGGGAAGCACGAGGACGCTTGCGTGGTGAGTCAAACCGGTCGCTTG
TTTTCAATGTTTTTCACGTAGAAGGACGAAAACTAATAGGCTGTAATGTA
GCTAGGCGAAGCCGGCCGCGAGCCGGCTGGACCCAAAGAGAGCTGACCAC
GAACTCGTTCTGGTGCTGGTCATGTGTCGAGTCGTATGAAAAGGCGGTCA
TGCGGTATACTTTTCTTCATGCAGTCCGTCAGATGGTGTCTCTTGCGAAC
TGTGAGAGTATATTTCAATCCATCGTCAAATGTTTGCCGGCTACAAAAAT
AGACTCGCGGCCTCTAGAATACTGTATTAGGTCCCCGAGGTGCGTTGACG
TACATAATGCGGGGACAACAGTGCCGGAAACATCACCCCCCGGACAAATA
CAATAGTTGGCGTATTCGCCACAGAAAAAAAAAAAATAATCGCCCGAGTT
TCAAAATGAGCGGACACATAGAATAGAGTACCTACCCCGGTCCATTCGAT
TTACGAGTATTACTAGCAGTCGTGGGTAGCCCGGGGCACATAAAATACAC
GAGCTCATTCTGAAACTACTAGGCGAATGCTTTCATATGCCGAATTGTTC
GTACTTGTCTGGAGAATGAACCATGGCTAGTTGCTAAAAGGCCATCAAGA
CTCTCAAAGCGGTATTTTTATGATCACCGGCTCCGCCTCTATTGAGTACG
TCCATCTGTCTGTACAGGACATGTCTTTTTCAGGTCATTGTCCAATCCTG
TCCGGGATTTCATCGTTCTTTGGAGATTGCGAAGACGCCCCCCCACCCCT
CCCAGTACAGACCTGTGCCCGACCTCTTCCTAGGCAAGTTAAACCGAACC
CTAGGACGTTTCATATATTCCACGATATATAGAACAGAGAACCCCATTCT
GTTTCGCCCACTCAAAAAAAAATTGCCTAGTCGCCTCCCCGCCAGTATTT
CTTTTCGGCTCATTAGCTTCTTGGCTTCTTATCCTATAGGCATCGCCCGC
CGAGCTCCGTCCGAGCCTGCGATGGGTTTTGTGGCAGGGAGGGGGGCGGA
GGAGCGGGGACAATACGTTCGTCGTTCGTAGTAGTTTTTTCAGAATCGCA
TGGTTGGAAAATGTTGAGATTTTTGAATCGCTGCAGTACCTACGCGTACG
TTTTATGCGCGTTGCAGATCTGACGGGAGGTGTAGGCAGAGCAGTACAAT
CTCGAGGGGCTCGTTGCACGGTACTGTTATCGTGCAGATGGTGATTATGC
GCGGTAGAGGGCGTTGTTGGTCGAATGATTTCCCACTGTTCTGCCACGGT
GTGTGTGACTTCAAATGTCGGCATCGCTCCATGTGGTAGGGCGTGCTGCT
AAATAGAAATCTGAAAAGAGTTACTGGATTGCCCAACCTTCGAAATTTCC
CTCAATTCAACTGAGTCCCGTACCTGCTTTCGTCACATTTTGGCGGTGAA
ATAATCGAATTTTGTCTGAATTCTGCTTTTGTCTCAGCAGGGATCGGCAG
GCGTGCTGCATGCTAGTAATCAAATCCAATGCTGGACAGCATTTGGCGTC
CATGGACGGCTTTGATCTATATTACACGGTACACGGTTAAATGTATGTGG
TCAATATATATATATATGCCTCCCTGTTTGCAATGGTGCTATTTGTTTTG
ATAACAGCACCGCTGGATGTCGCTCGAGACATTGACTTGGAGGAACAAGC
CTCGGACGGAGAGGCGTCGGACGACTCCAACATGGTCTCGCCATCCTGTA
CTATTTGTCTGTCTGTCTACGAAAACGAAGAAGTGGTGAGAGCTGCGAGG
CGTAAGTAGGTGGTGTACTAGGCACGTACTGGTATTTTGTTGGCCAACTT
TCGCTGCATATGAAAGGGGTTTGTGGTGGGGCGTTATATCAAAGCGTTAT
ATCAATACCTGTACGTACAGACACTGTCAACCATAAACTCGTATTTTCAT
GTATCAGGTGTTCTAAAGGATTTCGCCTTATGCCGCCTATGAACATACCT
AATGCTCCAGCGGTCGGGTGCTGTATCAGGACCGTCTTGTGTAGACATTC
TGAACTAGCGCTTTCATGTAGAAATTCTGAATAATTGACTAACCTTGCGG
TTTATCGAAGTGAACACGTGGGTGGGCTTTGTACTGCAGTTTAGATGGTG
TACGATCTCCGGTAGTACTATAGTTTCAAGGTCGATCTTCTCAGACACGA
CGATATTCGAGGCAAGCAGAGTTGTAGCGGAGGAAATATCAATCTCGTAC
AGATACATCTATCATTAGAGGGACACGTGATGCTCTTTCAACAGCAAAGA
TTCGTGCTTCTCAGGTGTCTATCTACGGTATTTGAAGTTGTCCAGGGATA
GGAGGTAGCCTTAGTTAGTCCAAAGATATCCTCTGAGCATTTCCTTGGTG
GCTTGGCTCGGCGCTTCCCGACTCGTGCTTGCGTTCCCTCGGGCTTAAGA
CGTGGCCGCCGCTTTGTCATGATTTTCGTGGGTCAGTCTGTTCGCGCGGT
TTCGTATCATGCGGTTTTTGAACTGATATGATTTATCCGTTTGGTAGCCG
TAAGATACAATGCCTGTTGTACTGTATGTGCCTCTCTCCTTATGTTGGTT
TTTTGTGGTCTTGCAGTCCCACACGCCGGCTTTCCGCGCCCGAATTCTTA
CATCATCTCTCTATGAGCAGATCAAAGTGCTGCCTTGTGGTCACGACTTT
CACGCGGAGTGCCTCGACCCATGGCTGCAGTTGAAAGCCACGTGTCCACT
CTGCAAGGTGAGGCAAGCTTGGGGACTGCTGTTGTAAATATACCTATGCT
GTCACGTGGCAAAAGCGCTTGGATGTAAGGTGTCAACATGTATCAGAGAA
AAATGACCACCACCGTGACAAAAGTATCTGGGTGCGCTCTGTAGAAGCCA
TTCCGAAATGGTCACCACGTTTTTCTTATGAATTAGTTGCAGTTCCGGTT
ACGTATATAGAAACAGTGCGATCTATTGCAATGGTGTATGCGAGTTCTGC
GACCCCATCGGAAGTCACGTAGAAAGATGTGTGGTTTCGATCTTCACCTA
GCCTTTAGTGGGTTGCCTCGTATTTCTAAGCGTTTTACATCCAGCAGCTC
CTTGACCTCGTCTCTCCATGGTTGACCCCTTGATTTTATCGTGAATGTTT
CATGTTTTTTGTTTCTTGTGCGAAGTAACGTTTACTATTATAGAGGGCCG
CCACGAGCAACCTTTGAGTCACACGTGCGAGTGACGGACGAAAGGAAATC
CTTGCAGACAGGGCTGATGCTTTACTGTCATCTATGTCATACCATGTGCT
TCCGCCTTTTATACATGTTTGTCCACATTCCGTAGCGTAACCCCTGGTCT
CTGGTGCCTATTCGGACAAAAATACCTGTTAAACCGACGAAGTGACTGGT
CGTTGCCAATATACACCGGACCAGAATAACTGGAAGTAAGTGACGCTTGC
TTCAGATAAGCGTTGTATATCTTTCTTAGCTCGTGCTCTGATGTTACCCC
CTGCCGGTAGTCCAGCCACGGCTACGCCTTTGCGGTTATGCTCTAATGCT
TAATCCTCCTCCCCATGTACCCAAAGCTCAAATACCATGTGGTGACCCTC
GTACAACGACTCGCTGCGATTATATGTAGGCACAAGTCCGTGAAGGTTCG
TTTTGTGAAGACGTTGCTTGAGCGCAAATTTTGTTCTTTACTGTTTGAAA
ATACGCCAGGCCATGATTCATGCTTACGACCTTAGCATACTGTTGACCCG
CCATATCTTTTGCCCTCGTACAAAAATTATTTTTGTGCTGTAGACCCAGC
CCTTCATCAAGGCCAAAGAACGTTCTCGACGAGGGCACAGTCATGGCAAC
GGGCAGTCGCAGGCTCACGTGGCAGCTGAGAGTGGACAACCGGCGACGCA
AGCAAGCGTACACCCGCGTCGCGGGCAGGCACTCCTGAGGGAACCCCCTT
TCGTCGCTGGGCCGAGGGATATGGTGGATGGTGGAGTGGCGCGTGTGGGG
GTTGTTAATGGTGGTGTGAATTTGGGAGTGGGCTTGATACTACCCGAAGG
TACCGAAGAGTGTGCAGGTGGACGGGGAGAAGAGAGAAACGAAATATTAA
TGGATGGTGGCAAGGCTGCCGGAGTAATAGGGGAAGATGGCATCACAGTG
ACCGCGCAGCAGCAGCAGCAAGAGGACGATAACGATGAGGAGGATGGACT
TGGAAGCGAAGAGTTGGCAGGAGGAGCTGAAGGAGTTGTTGAATGCGACA
ATGTTGATGACAGCATACAGAAAAAGCCGGGACATGACACGGAGGTGAAA
ATTCGCGATGCAGGAAACGATGATGTTGCTGTTGCAGTCAGGACCGCCGC
CGCCGCCGCCGCCGCGGTTGATGAACCTGAAGTTTCCGTAGGAAATGCAA
CAGGCCCGGCGAGAGAGATGACGCGTATTGTTGGGGATGACAGGCAGCTT
GGACACGCTGGACTAAGAAACACCATGGAGGGGTCTGATAACGGGGACGC
CGCTGGTAGGTTCGTCAAAGTTGCGAAACAGGAGGGCAAGCTTGGGCGTG
TTGGAGTAGGAGCGCCTTTTCAGACGTCAACCCCAAGATAAGCCCTCGTT
CGGTGGCCGTCGGGTGTGGATCTTGACGTCGGGCAAAGCGCACTGGTACC
ATTTTGGGATTGGGGCGCCATACTGTATCATCTTCTTAGGGGTTTAAAGT
AATTTGGCATTTGTGTATGTGTTTCTGTAGCCTGTGATCCTGTGGACTGC
ATGTTTGTATGCGTTCACGCTGTTTTTATGTCATCGTTGTGAGGATGGAG
GGCGTCACCGCCCATGTGCGCAAGGCGCGAGGTACTTTAGTCCGCTACTT
TGCCTCCATGAAAGATGTGGTGTTTCTGAGAGAACAAGGAGATAAGGATG
ATGGCCGCATTTGTGACTTGCCAGAGACCATTTTCTCTTTGTTTCTTCTC
TTCTGGTTTGGTGTGTGATGTGTGCCGAGTTGTCTTGCGCCGTCGGACAG
ATCTGTGTTTTGGCGTCCGTGGGACTGTGTTCCCCATGGTAGTCGTGTGT
ATGTTTTCTTGTATGATAAGATGCTATCTTTTCCTGACAAGACCCACATC
GTGCGTTGCTGATTTAAAACACTCGCAACGTCAAGAGCTAGCGGTTGCTG
CAAAACACAGAGGAAGGTAGTGAAGATTCACTTGTTTTGTCTCTTTCATC
TCTTCTTATCTCTGGTTGTAAACTTGTCAGGAACGGGAATGCTTCAACTA
AAAGAGAGAGGCACAATGTGTCGCCAATTGTATTGGCAATGTCTTGGCCG
ATATCTCGACACTTTCGAAAATACCCAAACCCCGACAAACCGAGGTAGCG
TTCTTTTTCGAGGGATTTAGCTGACGCAATAAACGCAATTCGTTGAATTC
CCTCAAGACGTTCATTGAGCATGACTCATGCAATGATACGGTTTCTAGTA
AGGCTAGACTGGTCACAGCTCGGTCCAAGCGCACTAGTACGCTGTCGACT
TTGGGATGTGGGCGTGGGGTTTACATGGACATATACATACACATGTACAT
TTATTAAAACGTGAGAAGTGCTGCAAAATTTTATGCCTAGTTCTTGTAGA
GGCGCAAGTTGATGTAGCAGGGTTGGTTGCAGCTAGCCATTTAAATTTTA
ACCTTTGACAGATCGTGCGCGTTTGATATTGCGATATTGTAAGGTACATG
TAAAGGTTATTTGTTCGATCATGAGGCGATCAAGGCCCTCACTCTACAGA
TTTCGGCTTGGTTTAACTGTGACGTGTAAACATTTGTATATATATGTGAT
CTTGAGTATTCTTGTGAGCACGTTCATCGCACAGTCAGTGCAAGTAATGG
AGGGGGCGGCTCAACGAATGTGGTATGCTATTGTGTCTTTGCTGCTGCAA
TATCTTGTACCTGTGGCATATTTCGAGGAACTGACAGACTGACTGACTGA
TTGGAGTGGATAGACGGAGCAGTCAGCTTGTTGGGTGCGGCGATCACGGC
ATAAAGGTAGTTGGTCTCGCTTATCATGCGACACCATTGTATAAGCCGAT
CCCAACAAAAATGGTTGGAGCATTTCTTGCCTGTCAAGACGACCTCTTCC
ATTCGTGGTCGGTCCTGGAAGAATCGATCCAGGGCTCATCAGGATAATAC
CAAATAATATTTGCATGCTTGATAGTTGCTGCAGTTGCCTTCTGTGGTCA
GTGATGTCGGATCTTCCCTTGCACGTCTACCACTGCAGAGAGGGCTTGGG
TGAGAAATGTAGGGCACAAGGCAACGTAGAGACTCTCCGCAAACGCAGCG
AGCATAGAGCGTGAAATATCGAGGTCTGACACACACCGACCAGCCGGATG
CCGACCGTGTGTCTGTCGCTTTCATTTCACACGAGTATTTGTGCAAAAGG
AGCGGATTTGATTGTCATTTAGTTATTTGGAATTTCAGGCTTTGTGTTGA
GATAATATTGCACTACCAATGTACATTGATGGGTGGGAAAAACGGTAATA
TCAATATCCATGTTTTTTCCCGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig584:24121..33443- >mRNA_H-paniculata_contig584.13444.1 ID=mRNA_H-paniculata_contig584.13444.1|Name=mRNA_H-paniculata_contig584.13444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2472bp|location=Sequence derived from alignment at H-paniculata_contig584:24121..33443- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGCAACCTCTGTCTGGAAGTGCAGCAGGTTCTCCGTAACGTAACGGG
CCTAATGGGAGCGATGTTGGCGCTCATAGTGATGCTGAACGTGATAAATC
GCTGTCAAAACCGACGTCGGAGCAAGAAGCTCGAACAGTCTATTTTCACG
CTGCCGTGCTACGTTTATCCTTCGAGAGAGAAAAGGGCGGAGGCGATGAG
GGAAGCACGAGGACGCTTGCGTGATGTGCAACCTCTGTCTGGAAGTGCAG
CAGGTTCTCCGTAACGTAACGGGCCTAATGGGAGCGATGTTGGCGCTCAT
AGTGATGCTGAACGTGATAAATCGCTGTCAAAACCGACGTCGGAGCAAGA
AGCTCGAACAGTCTATTTTCACGCTGCCGTGCTACGTTTATCCTTCGAGA
GAGAAAAGGGCGGAGGCGATGAGGGAAGCACGAGGACGCTTGCGTGCACC
GCTGGATGTCGCTCGAGACATTGACTTGGAGGAACAAGCCTCGGACGGAG
AGGCGTCGGACGACTCCAACATGGTCTCGCCATCCTGTACTATTTGTCTG
TCTGTCTACGAAAACGAAGAAGTGCACCGCTGGATGTCGCTCGAGACATT
GACTTGGAGGAACAAGCCTCGGACGGAGAGGCGTCGGACGACTCCAACAT
GGTCTCGCCATCCTGTACTATTTGTCTGTCTGTCTACGAAAACGAAGAAG
TGATCAAAGTGCTGCCTTGTGGTCACGACTTTCACGCGGAGTGCCTCGAC
CCATGGCTGCAGTTGAAAGCCACGTGTCCACTCTGCAAGATCAAAGTGCT
GCCTTGTGGTCACGACTTTCACGCGGAGTGCCTCGACCCATGGCTGCAGT
TGAAAGCCACGTGTCCACTCTGCAAGACCCAGCCCTTCATCAAGGCCAAA
GAACGTTCTCGACGAGGGCACAGTCATGGCAACGGGCAGTCGCAGGCTCA
CGTGGCAGCTGAGAGTGGACAACCGGCGACGCAAGCAAGCGTACACCCGC
GTCGCGGGCAGGCACTCCTGAGGGAACCCCCTTTCGTCGCTGGGCCGAGG
GATATGGTGGATGGTGGAGTGGCGCGTGTGGGGGTTGTTAATGGTGGTGT
GAATTTGGGAGTGGGCTTGATACTACCCGAAGGTACCGAAGAGTGTGCAG
GTGGACGGGGAGAAGAGAGAAACGAAATATTAATGGATGGTGGCAAGGCT
GCCGGAGTAATAGGGGAAGATGGCATCACAGTGACCGCGCAGCAGCAGCA
GCAAGAGGACGATAACGATGAGGAGGATGGACTTGGAAGCGAAGAGTTGG
CAGGAGGAGCTGAAGGAGTTGTTGAATGCGACAATGTTGATGACAGCATA
CAGAAAAAGCCGGGACATGACACGGAGGTGAAAATTCGCGATGCAGGAAA
CGATGATGTTGCTGTTGCAGTCAGGACCGCCGCCGCCGCCGCCGCCGCGG
TTGATGAACCTGAAGTTTCCGTAGGAAATGCAACAGGCCCGGCGAGAGAG
ATGACGCGTATTGTTGGGGATGACAGGCAGCTTGGACACGCTGGACTAAG
AAACACCATGGAGGGGTCTGATAACGGGGACGCCGCTGGTAGGTTCGTCA
AAGTTGCGAAACAGGAGGGCAAGCTTGGGCGTGTTGGAGTAGGAGCGCCT
TTTCAGACGTCAACCCCAAGATAAACCCAGCCCTTCATCAAGGCCAAAGA
ACGTTCTCGACGAGGGCACAGTCATGGCAACGGGCAGTCGCAGGCTCACG
TGGCAGCTGAGAGTGGACAACCGGCGACGCAAGCAAGCGTACACCCGCGT
CGCGGGCAGGCACTCCTGAGGGAACCCCCTTTCGTCGCTGGGCCGAGGGA
TATGGTGGATGGTGGAGTGGCGCGTGTGGGGGTTGTTAATGGTGGTGTGA
ATTTGGGAGTGGGCTTGATACTACCCGAAGGTACCGAAGAGTGTGCAGGT
GGACGGGGAGAAGAGAGAAACGAAATATTAATGGATGGTGGCAAGGCTGC
CGGAGTAATAGGGGAAGATGGCATCACAGTGACCGCGCAGCAGCAGCAGC
AAGAGGACGATAACGATGAGGAGGATGGACTTGGAAGCGAAGAGTTGGCA
GGAGGAGCTGAAGGAGTTGTTGAATGCGACAATGTTGATGACAGCATACA
GAAAAAGCCGGGACATGACACGGAGGTGAAAATTCGCGATGCAGGAAACG
ATGATGTTGCTGTTGCAGTCAGGACCGCCGCCGCCGCCGCCGCCGCGGTT
GATGAACCTGAAGTTTCCGTAGGAAATGCAACAGGCCCGGCGAGAGAGAT
GACGCGTATTGTTGGGGATGACAGGCAGCTTGGACACGCTGGACTAAGAA
ACACCATGGAGGGGTCTGATAACGGGGACGCCGCTGGTAGGTTCGTCAAA
GTTGCGAAACAGGAGGGCAAGCTTGGGCGTGTTGGAGTAGGAGCGCCTTT
TCAGACGTCAACCCCAAGATAA back to top
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