mRNA_H-paniculata_contig5409.12850.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5409.12850.1
Unique NamemRNA_H-paniculata_contig5409.12850.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5409.12850.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 7.390e-22
Identity = 50/144 (34.72%), Postives = 81/144 (56.25%), Query Frame = 3 
Query:  690 LIDVSAMTLVRMSSPSYDPRTEQEGGCGVKMGCGPARTRDGKLKSTSRWSCSEKLGRGRCVVKYSFETPQDLHNLRMAFHEGDRSRHTLQVLADGKEIALVKTSGKTLDFQDWDIDAKAVSTLALQAVDLNPNYWIHVTEVEIL 1121
            L+D    T V   + +YD RT + GGC    GC  + TRD   +  SRWSCSEKL   +C + Y FE PQD+  +++ F++GD    TL++         + +SG +  ++ WDI+      L+++A++L+ + WI +TEV  +
Sbjct:    4 LVDARKRTTVNKWANAYDDRTSEYGGCDPD-GCKASLTRDQSWQDESRWSCSEKLEDAQCKITYKFEEPQDIVRIKIKFYKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEVRFM 146
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BLAST of mRNA_H-paniculata_contig5409.12850.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 8.070e-15
Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 3 
Query:  690 LIDVSAMTLVRMSSPSYDPRTEQEGGCGVKMGCGPARTRDGKLKSTSRWSCSEKLGRGRCVVKYSFETPQDLHNLRMAFHEGDRSRHTLQVLADGKEIALVKTSGKTLDFQDWDIDAKAVSTLALQAVDLNPNYWIHVTEVEI 1118
            L+D    T V+  + +YD RT + GGC    GC  + TRD   K  SRWSCSEKL   +C + Y+FE PQD+  +++                +G+   ++ +SG +  ++ WDI+      L+++A++L+ + WI +TEV I
Sbjct:  608 LVDARKRTAVKKWANAYDDRTSEYGGCDPD-GCKASFTRDRSWKDESRWSCSEKLEDAQCNITYNFEEPQDIVRIKI----------------NGEFKKIITSSGTSSTYETWDINTDETKWLSMEALNLDDDEWISITEVRI 733
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BLAST of mRNA_H-paniculata_contig5409.12850.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 5.630e-12
Identity = 47/156 (30.13%), Postives = 90/156 (57.69%), Query Frame = 3 
Query:  678 SSAGLIDVSAMTLVRMSSPSYDPRTEQEGG---CGVKMGCGPARTRDG--KLKSTSRWSCSEKL--GRGRCVVKYSFETPQDLHNLRMAFHEGDRSRHTLQVLADGKEIALVKT-SGKTLDFQDWDIDAKAVSTLALQAVDLNPNYWIHVTEVEIL 1121
            ++A  ++  + T V +++ +YD R  +  G   CG +MGC P    DG  +  + SRWSC+E++    G+C + ++F++PQD+ ++++AF +GD    TL+V  +G +I   ++  G T  F  + I    V T+ +++V ++ + WI + EV  +
Sbjct:  247 NNAEFVEAGSKTTVGVTATAYDDRPGESAGDVGCG-EMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFM 399
[Close]
BLAST of mRNA_H-paniculata_contig5409.12850.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 6.980e-11
Identity = 39/119 (32.77%), Postives = 71/119 (59.66%), Query Frame = 3 
Query:  780 MGCGPARTRDG--KLKSTSRWSCSEKL--GRGRCVVKYSFETPQDLHNLRMAFHEGDRSRHTLQVLADGKEIALVKT-SGKTLDFQDWDIDAKAVSTLALQAVDLNPNYWIHVTEVEIL 1121
            MGC P    DG  +  + SRWSC+E++    G+C + ++F++PQD+ ++++AF +GD    TL+V  +G +I   ++  G T  F  + I    V T+A+++V ++ + WI + EV  +
Sbjct:    1 MGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVAMESVGIDADDWISLLEVRFM 117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5409.12850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G122_ECTSI7.390e-2234.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4E8_9PHAE8.070e-1533.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8U9_9PHAE5.630e-1230.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCQ5_ECTSI6.980e-1132.77Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5409contigH-paniculata_contig5409:2398..12919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.3
Seed ortholog evalue1.1e-13
Seed eggNOG ortholog2880.D7FL48
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size3272
Cds size951
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930555.8061032-UTR-H-paniculata_contig5409:2397..38221622930555.8061032-UTR-H-paniculata_contig5409:2397..3822Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 2398..3822 -
1691481346.3778532-UTR-H-paniculata_contig5409:2397..38221691481346.3778532-UTR-H-paniculata_contig5409:2397..3822Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 2398..3822 -
1622930555.8247364-UTR-H-paniculata_contig5409:3841..43881622930555.8247364-UTR-H-paniculata_contig5409:3841..4388Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 3842..4388 -
1691481346.3916616-UTR-H-paniculata_contig5409:3841..43881691481346.3916616-UTR-H-paniculata_contig5409:3841..4388Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 3842..4388 -
1622930555.8507912-UTR-H-paniculata_contig5409:4508..46631622930555.8507912-UTR-H-paniculata_contig5409:4508..4663Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 4509..4663 -
1691481346.4014616-UTR-H-paniculata_contig5409:4508..46631691481346.4014616-UTR-H-paniculata_contig5409:4508..4663Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 4509..4663 -
1622930556.0188115-UTR-H-paniculata_contig5409:12725..129191622930556.0188115-UTR-H-paniculata_contig5409:12725..12919Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 12726..12919 -
1691481346.4659204-UTR-H-paniculata_contig5409:12725..129191691481346.4659204-UTR-H-paniculata_contig5409:12725..12919Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5409 12726..12919 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930555.874145-CDS-H-paniculata_contig5409:4663..46991622930555.874145-CDS-H-paniculata_contig5409:4663..4699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 4664..4699 -
1691481346.4095263-CDS-H-paniculata_contig5409:4663..46991691481346.4095263-CDS-H-paniculata_contig5409:4663..4699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 4664..4699 -
1622930555.894531-CDS-H-paniculata_contig5409:5298..54481622930555.894531-CDS-H-paniculata_contig5409:5298..5448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 5299..5448 -
1691481346.4176264-CDS-H-paniculata_contig5409:5298..54481691481346.4176264-CDS-H-paniculata_contig5409:5298..5448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 5299..5448 -
1622930555.91778-CDS-H-paniculata_contig5409:6081..64341622930555.91778-CDS-H-paniculata_contig5409:6081..6434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 6082..6434 -
1691481346.4259791-CDS-H-paniculata_contig5409:6081..64341691481346.4259791-CDS-H-paniculata_contig5409:6081..6434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 6082..6434 -
1622930555.9349988-CDS-H-paniculata_contig5409:7360..74891622930555.9349988-CDS-H-paniculata_contig5409:7360..7489Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 7361..7489 -
1691481346.433831-CDS-H-paniculata_contig5409:7360..74891691481346.433831-CDS-H-paniculata_contig5409:7360..7489Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 7361..7489 -
1622930555.9590812-CDS-H-paniculata_contig5409:8022..81241622930555.9590812-CDS-H-paniculata_contig5409:8022..8124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 8023..8124 -
1691481346.4418726-CDS-H-paniculata_contig5409:8022..81241691481346.4418726-CDS-H-paniculata_contig5409:8022..8124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 8023..8124 -
1622930555.9787512-CDS-H-paniculata_contig5409:10939..110321622930555.9787512-CDS-H-paniculata_contig5409:10939..11032Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 10940..11032 -
1691481346.449765-CDS-H-paniculata_contig5409:10939..110321691481346.449765-CDS-H-paniculata_contig5409:10939..11032Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 10940..11032 -
1622930555.9982166-CDS-H-paniculata_contig5409:12637..127251622930555.9982166-CDS-H-paniculata_contig5409:12637..12725Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 12638..12725 -
1691481346.4578547-CDS-H-paniculata_contig5409:12637..127251691481346.4578547-CDS-H-paniculata_contig5409:12637..12725Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5409 12638..12725 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5409.12850.1prot_H-paniculata_contig5409.12850.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5409 4664..12725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5409.12850.1

>prot_H-paniculata_contig5409.12850.1 ID=prot_H-paniculata_contig5409.12850.1|Name=mRNA_H-paniculata_contig5409.12850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=317bp
MAKLLRLLVLLRLSIACLSEASSHECSPLGGLCSSETPCCERTHDCFAGN
CDLAVYIPSHGEKCDEKCGHSCSTRGEACVNGICTGPSEDCSSQGEECNV
EKGCCDPSHDCVPLSDAPLPPIWERAGVCKVSKAPSTGDKCDQKNPCRFR
FDACIDGVCKVSSAGLIDVSAMTLVRMSSPSYDPRTEQEGGCGVKMGCGP
ARTRDGKLKSTSRWSCSEKLGRGRCVVKYSFETPQDLHNLRMAFHEGDRS
RHTLQVLADGKEIALVKTSGKTLDFQDWDIDAKAVSTLALQAVDLNPNYW
IHVTEVEILTRNQMPC*
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mRNA from alignment at H-paniculata_contig5409:2398..12919-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5409.12850.1 ID=mRNA_H-paniculata_contig5409.12850.1|Name=mRNA_H-paniculata_contig5409.12850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10522bp|location=Sequence derived from alignment at H-paniculata_contig5409:2398..12919- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCCCCACCCTCGACTTTTGTGAGAGAGAAAGCGCCCTGTGCCACCACAC
CAAAATATTCGTAACTGCGGCCGAGCTACGACACATCAAGCGGTGCGCGA
AGCCAGAGGGGCTGTGTCCAGATCGTACACCCTCACTTCAGCTACTCTGT
GGTTGGCATACCTAACGCACCCTTCCCTCACTCTTGGTGGAGTCATGGCG
AAGCTCCTGAGGTTGTTGGTGTTATTGCGCCTTTCCATCGCCTGTTTGTC
GGAAGCATCTAGTCACGAGTGCTCTCCTTTAGGTGAGCCAGAGAGAAAAA
GAGAGGAAACAAGGGAGGGAGAGAGAGAAACAGAGAGAGGGAGAGACAGA
CAGACAGAGACAGAGAAAGAGAGGGTCCGGGGGTGGGCGGGGAGAGACCG
AGATAACAAGAGAGAATTGCGGACTAACTGACTGTCCCTTCATGAGAGGA
TGATCATCGTAATGATCTCACTGGCATACTTTGGTGTCGTATCACCTGTG
TTTCATCTTCGATTTGCTACCATAGGCCCCCAAGACTAGGTCAATCAGCA
GGAATCTGCACATCTCAATGCAATACACTGAAAAAAACACATTAGTTCTG
TGTTTCGACTGGCGTCCCGACGAGCCCATGGATTGAGCTGTATGCCTGTT
CAGTTCGCCATTTAGTCTCGTCGTGATCACAATTTTGTACTTCGCAACTG
CCCAGTCACGCGGCCGCTAATTGTTGCCTTTCGCGATATGCATGTGAGCA
ACCGCCGTGGTCTACGATAACCAACCTTCTCAATGGCAAAAACTCTTTCA
TGGGTACTTGGTTTATTAAGGACCCTCGATCTGGGAACCGTTTTCCCTCA
TAGCGTTCTCATCTATCAACCCAGCAGAGCTGTCCAAAAGTCACAGACAA
TCACACACCGCTCAAAGCACCAGGCAGCAGGAGATATGTTCAATGGGACA
AGCGCCAGGCATACACCAATGAATTATTATGCTTACTGACTGTTTGTGTC
TGTTTGTACCCAAGGCAGCTCAGCCTTCCGGTCAGGCTCTAGAGTAATTC
CGGAATGCGACTGCATTCGGTACAAATAAATTCCCCTGTTGAGCTGTTCT
TATTTTTCTCATTTTAGATGTGGATTGGCGCTTTGGCGACAGGCATCTTT
TCTCCAACTTACTGACTCCTCATCCGGAGTGCTTCGTCGACTGTCTTGCT
AATGCACCCTTTCGCACATATCGTACGTGGTGTCGAGGTTATGCTTCGTT
TCATCTGTTGACGGTGACAAGTCTGTATGCACGGTACAGACAGGCTGTAG
AGCTGTCACACAAAACACGACAGATGAAGTACTATACTATATATATATAT
ATATATTCTAAGTGTACTGTACTCTGTACCAGGCTGTTGTCAAAAAGACG
ACATGTATGTATCTGTGTGTGTAATTATTTATTTGCACCGCCTGGCTGAA
GTCCTTCGCTTGACCCTGCAAACTTTTGGTGAGTCGGGTAGGCATTATTT
ATTTAACATTCTCATCGTGCTTGCGTCTGAATGTGACTACACCAGTACAC
ATGTGCTCAGTGTTGTGTACTGGTTGTCAAGCTCCAAAAAGCGTTTCTTC
GTGAGAGGTGGAACGAAACTGTGATCATTTTATTCCATAGTGATGATGTT
GGCGTGAAGTGAGTACTACCGTTCCAGACGGAATCGTGGTATCCATCGTT
CTTCAGGTGAGGGTACTGAGCACAGGGAGGGAGTCGCCTTGGAGCAAAGC
GGCGGTCTTCTCTACTACTGCCCGTGCCGTACTTGAGGCAATGATACTAA
AAGTGGGTCGTGAATCATTCCTGAAAGCGACTCGTGTGTGTCCCTTGTTT
CTTTTGGTGTTTGGTGTTACCGCGTTGGGTGGGGCAGGCGGTTTGTGTTC
AAGCGAGACGCCATGCTGTGAAAGGACGCACGACTGCTTCGCTGGGAATT
GCGACCTCGCAGTGTACATACCGTCGCATGGTGAGTCAGTGGATTTGGAC
CCCAAACTTTCTGTTTTCACGATGGTCGCCATCCATTCTGCCGAGATTTG
CCGCAATGAAACCGTCTGGAGACGAAGGAAAAGCCATTTGAGTCTAATTA
TTCGAAACGACTTCAGGGACAAGGAACAAGGGATAGCAGAGGGAGTCTAC
ACCTTCGAAGCCATGCGTAATGTTCTAGGCCCAAGGCACCCACAAAACTC
GTGGCCGTATCTCGGCAACGGGGGTCAACTGGGTGTGCCCGACTCTAGTT
GGAAATTTCCTTTTGCTTGTGAAGTTTTATCCTTCTGTAGACTCGATGAT
CCTTGCACACGCAGAGATCATAGACGCGATCAAAAGCTCATGTGCACTAT
ACAACACTGTACGTGTTCACACCCCAGGCTCAAGTTCAGCTGATGGCCTT
TGCACCCCAAGCCTCGACACCTGTCCGTATGTACATGACTATATATTTTA
CTTTCCCGTTGCCGAACTACAAACCCGCACCACCTCCTCGTACGGGAAAG
GTAGATCGCGCCGCAGGGCAGACATATTGTGAGTGGAAATATGTAAGTAA
TATTTCTTAAATTTTGACCATGTTGCTCCACCTTTTTTTTGTTCTACGCT
ATCGAGCTCTATGAAGGCCTATTCATGCCATGTACTATGTACTATCAGGT
CATCCCTCTTGGAGAGGAGTTCAGATCGTTTTCCAAAGCCAGCTCAATAT
CGCTGTTTCTCGTGCCTTGATGCAGTCCATCATCACAAAGAAAAAGGCTT
GTTCGTTATGGAAGACGACTCAAATGGCGTTCGATGTGCTCCGATAAAAC
GTCTCCCCGTTCAACCGAGTAATGTTTCTCCGAGCATTGTTTCATGTATT
TTTCTGTAAGCGCAGTAAATCGGCAAATATGTACGACGTACGTACTCGAG
GCGGGTTGACTGTACATGAATTCGCTCATAACGTTGCATGATGGGCATTT
TTTTCTCGGCGTTCGGGCGTTGTGCTAATGCTGCGCCGAACTCATCGGAA
CCTGAACGCTAGTGGTACCGATGCATGGTAATCAGCGATATTTAGCTGTC
TGTGTTATATATCATATATAATATTGATGTCAGTATATTGGTTTGCAGTG
GGTCAAGGGTCCCAACTATTGGTGATTTGTTTGAGAAGAGAGATGTCATA
CGGGCTGGTCTAACACAATGGTTTCGTAGTTCTGTCTGTTTCGCTCGGCT
ATTACATTCGCGTGTCTATTTAGTAACCGACCCGATTCAATTGATGTTGA
TGATGGGATTATACGTCGCATGTGTCTTTCGAAATTTTTACATCGGTTTG
ACAAGATGACTGACCCCCGCATTGAGAAAATACTGGAAAGTTTATATTAC
TACTTCGTTAATACATTGGGGTTTGATTATGTATACGTTAGGGTATACAA
CAAGATATACCCTTGTCACGCATGATCCTTTTTTTTAGAATTTTTTCGAG
ACGTCAACCGATAGTTAATACGCCGCAAACGTGCAGCGCATTACCCCCAA
AATTTCCGTCACTATTAATAGTACACATGAGAAATCGAGTGCTGGATGAG
GTGTATTTGTGGGCGAAATTGGTCTTTCCATAGTTCGGTGCGAAAAATCG
GAGACCAGGAGGAGGTTCTGACGGTACCGTTTGGTGAAATTGAAATAAAA
TACAGACATGATCCCTTCTGTAAGTGAATAAGTCGTATCTGTTCGATGTC
GACAGTTACTACACTAGTGGTGTCGACAAAAGTGATTGATGATGACTGAC
TGTACTATGAACTAGCTGTAAACCGACTGGGTGAAAAACGAGAGCTTTTC
TGTTTTGAAGGTATGTTCTCGACGAAACGTCCTCATCTTTTGATAGCTAG
TACCTGGAGGCAAACCTGGAAACTAGACGAAGCGGTTTATTTCGAAGTTT
CAAGGTGTACAGCGGACCACTTGATGGTCTGAGATCACGATTGTGCCCTT
TCGTCACCCTGACAAAAGATCTTGTGCAAGCTGTTCTAGGATGCCATCTT
GATGCAGAATTATGGCTCGGACCACTTGATGGTCCGCGATCACGATTGTG
CCCTTTCGTCACCCTGACAAAAGATCTTGTGCAAGCTGTTCTCTAGGATG
CCATCTTGATGCAGAATTATGGCTCGGACCACTTGATGGTCCGAGATCAC
GATTGTGTCCTTTCGTCACCTGACAAAAGATCGTGTGCAAGCTGTTCTAG
GATGCCATCTTGATGCAGAATTATGGCTCGCTTCCGGCGAAACTGTTGGG
TGCCATTTTTTCTTTTGACACTGCATCCGACAGTAATAGGAACCAAGCGG
GGTACTTTAGCGGTTCATATGCGTGTTTCACAAAAACGAGAAACGATCAC
GTTTCGTTAGGTGTTCTTCCGCAGCCTCGTGTCAACCCCGTTTCATGCCA
GGTGTGTTACTGCCAAACTCAGCAAGTCGCATTTTATCATGTTCCAGAGT
CGCCAAGGCCAACCGGCAAAGCTCAACTTGATTTTTTTTTTTTGTAAGAA
CGTACGCCCCTTGCAGCAGCTGCGTCAGCGTTAAAAACTGCCCAAAAGTT
TTTTGTTCTGATGACTATTTCATGGGTTGATATCCACAGTTTGTAGAGTC
AACCATTAGTTTCCGGCGAAGTAGCTAGGAGTAGAAGTACGGTCCAAAAA
GGATTAAATTAATTGTTGGTACGATAGAAGTTCTGTGATTGGTCGTAAGT
ATGGAAAATATCAAACCTTTCCACGTACACGTTGCAGCGTACACAGCACT
TAATGGTTTCCTCCTGTTGTCATTATGTATCTATGTTATCATCAGGTGAA
AAATGTGATGAAAAGTGTGGGCACTCTTGCTCCACGAGGGGTGAAGCTTG
CGTGAACGGAATATGCACAGGCCCATCGGAAGATTGTTCGTCGCAAGGTA
ACGAGATCGTCACATTGCTGTGCTTTTTATTAGTCTGTTTTGATCTTTGT
TGATGAGATGAAAAATGCTGGCTAGGATTGCCCTCCCCCCCTCCACCCCA
CCCCACCTACCCCAGAATTACTGTTTCGTCGCACTGGACAGAGCACCGCG
ACGACCAGCCTTGGCCATCGGAGCTTGAACGTGCTGCAGGTTGTTCTGGA
GACTGTCAATGGCATGCGAAATTATGTGTGTTTGTTTCGGTTGCCCGTGG
CCAGTCACGAGTCTGCGGCACTCACTTGGCTCAACTGGTTTGTGGTTTGC
TTCGACCCAGGCACCGTATCGTACTGCACTCATCGGCGGCCCCCGCTAAC
GGTACCTTCGTATCTTCTGTCACGTCCGTAAACGCTGCAACCGAGTTGTT
GTCTTGATTCTACTGAGCTTGTCTCGAAATCATTTGGCGTGAATGCCTCG
AACGACTCGGCGCGTATATCGTATTTTCCACCTGTTTTGATTTTTTTTTT
TTTTTTGTCTTGTTTACTCCCTGTATCCAGGGGAAGAATGCAATGTGGAG
AAAGGTTGCTGTGACCCCAGCCATGACTGCGTGCCATTATCCGATGCCCC
ATTACCGCCGATCTGGGAACGCGCCGGAGTTTGCAAGGTTTCCAAAGCTC
CCTCTACAGGTGAGTCTGCGGCAGTAATCCGTCATATTCGGTACACTTGG
ATAGACATGTAAAGGATAATGTCTGTTACATGTTCACCTTCGAAATGGAA
ACCAGTGCGTCGATCATTTGTGATTTACCTCGCCTTTCTAGATGTGTGTC
CACATAATAAGCGGTAAACCCTGTCACTTGGCCCCAAACAACGGAAATCT
CACTATCGAAATAGACTTTGGCGCAAGGGTGCGCGTAGCTGAGATAGTTG
CTGGGGGTGGCTTTCTTGACTCAGGACCCTAAAGAAACGCAAAGGCGTTG
TGGGAAACGCGCATCGGATCTTTTTTCCCCCCCATATTCCACTATATTCG
GTTCCTCAAAAATAACTCTGTCGATACAAGTTTTTTTTTAAATCACGTTT
CTATTTTTAATGCCGAGAATTGGCCAAAAAGCAGATTTAAGAGGGCTAAC
AGCTGCTGCTTCTACGACAAAAATTAATTTCCCATAGAAAAATACGTTTT
TTTTTTTTTAACCCCCGGAAGGTCAGGCAAAAAACCCTTTCCGCTGCTTC
CACTCTTCGGAAGATTTCTGAGTGTCTGCATTTCCTTATTAAATGGATCA
GAGTTATTTGTTCCTCTGCGGTATATAGAAAAATACGTCTTTTGGGCTAT
GACGTCCCGCGTTTTGATTTTTTTCCAAAACTCTTCCGTGCGATTTTTTT
TTTTTCTCATTCACGGCACTGATCTAAAAAATTACATCACGAAATCCGTT
GTGCTTCTCGAGATTCAACGAGCGTCTCCTGACGATGTCCCGTAGTAGTA
TGTATTAAACGTAAATGAGCGTGGCGACTGTTGCTGGCCAATCGTATGTA
TGCACTACTCATCACGGGCGAATTTGTCATGCTTACTTCGTTGTATATGG
TTGTTGTTGCTCGCCTTCCGTCGTGAATTTTACAGGCGATAAGTGCGATC
AGAAGAACCCGTGTCGGTTCCGATTTGATGCGTGCATCGACGGAGTATGT
AAGGTCAGCTCTGCGGGTCTGATCGACGTCTCAGCGATGACATTGGTACG
TATGAGCTCTCCTTCGTATGACCCGAGAACCGAACAGGAAGGGGGATGCG
GAGTTAAGATGGGGTGTGGACCTGCACGTACGCGTGACGGAAAGCTGAAA
TCGACGTCCCGTTGGTCTTGCAGCGAGAAGCTCGGAAGGGGAAGGTGCGT
GGTGAAGTACTCTTTCGAGACACCGCAAGACCTACATAACCTGCGGATGG
CGTTTCACGAAGGCGACCGCTCGCGACATACTCTTCAGGTGATCGTAGCT
CCCTTTAACAGACTTTTGACTCTTTTTTTTTTTTTTGAAGAGTTGGTCTG
TCGCTGGGTAAAGAAGTCACATGAGGGAAGAAAATAAGGTAGCAAAAGGG
CAAAGGCAAGTGAGTGGGTATTAAGCCAGCTGCTGTTTTTTTTTTTTTTT
TAACCTTCGGAAGGCTGAGGCAAAAACCTTTACCGATGCTTTCATATTCA
AGTATTTTACCAACGTATGTCTACATTTCTTTTAACAAAACGGAGTTATT
TACTCCTCTGCGGGGTAGGCGCCAGCCACCCCGGTTGGGCCGAACCACGT
AGGCAGTGTGGGGGTTGCACCCACTAAAAGACCTCTGACTAGACTTTCAG
TCATGCTCAGTTCACGAGCTATCCTACCCGTTCGGGCGTAGGTCCGTGGG
CTGCTGACATTTGCGAGAGGTGGTGTGTAGGAATTATCTTATGGGTTGAT
CGACTTGTGACCAAGTATCAGCGCTGGGGATTAGGGCTGTGGTTGGCTTG
AAGCGGGGGGGAGACTCTTGGAGGTGATTGAAGCAATTAGTCCCAGACAA
GTGTAGTGAGAGGTCTTTTTTGGTATTGAACGACCGCTCCCACACGGTTT
GTGTGCTCTGTGGTGACTCAGGTGTTGGCGGATGGTAAGGAAATTGCATT
GGTAAAGACGAGTGGGAAAACATTGGATTTCCAAGACTGGGACATTGACG
CCAAGGCAGTTTCAACATTAGCTCTTCAGGCTGTGGATCTTAATCCCAAC
TACTGGATTCACGTCACAGAGGTGAGCTTACAGCTGTGTGTGTTCTTGGA
CATATTTGTACGTTGGGTTTTGCTAAGTAATCGTTGGTGTCGTGTTGCGA
GAATAACCTGAAGGTTCTTGGTTGGTGTGTTGATACGGTCCCCAATCTCG
GGAGAAACTGCCATGTTATTGGCACACAGCTTCGCACGTCTTGTCGGAAA
GCAGGTGTCGACAGGTGTCCATACGGCGAGAAGGCTGTTACCCGAGAGTT
ACACATCTCGGGTGAAAGTCGATAAAAGGCCTTGGGATTAGCCATAAGGT
TTGTTTTAAAGTGTCATAGTACCAAGGTGGTCGACACCATCCCAAGCCCG
TTTGAAGTGGTCTCAGGAAGACTTTCGCAGTTTCCTGGAGTGTTGTTTTT
TAAAACACGTGACCGTTGAGGAAGGGTTATGCACGAAGGCGTATTCCCTT
GACATGACACCCGTTGTCCGTGGTGTAAGAGATGTACTGCTGTGGATCTC
GAACTCGATTCCTCATCTGAAGATTCACTCACGTACAATTGGGACAAATG
CCCCGACTTTTGAAACAAATTTCGCTTTGTGTGTCCTCTCCCGTTGTCCT
TCGTTGTTCCGTGTCAACAGGTGGAGATCCTTACACGCAATCAGATGCCG
TGCTGACAGTAGTATGATTTCCTGGTTGTGAAGTCGATTTATGGGAGAAA
CGAACCAGTGGCCCTGGTGTTGAATTTGTTCATCCGCTCGAGGGAAAAGG
TGATGAAGAATCCCATCAATATAATACTAGGGATAAGCGTCCACACGACG
GGGATAAACGTCAATACGGTGGATAGCCTCTTGTGGAGCTGTCATTATAA
GAGTGATGAAGGTACCCTTTCAACGTGACGAATGTACCCTTTTCCTTGGA
CAGGGTGCGACGCCAACAAGTGACCCGGGTTATTTGAAACCCTGGTCTTG
ATCACCCCCTTTGACTGTGCTTGATGTTCTAGAAAGGGCCTGGGGCGTTT
GCCCCCTATCTCTCTCTTTTCGTCAAAGCCTCCACTTTTTTTTTATATAC
CTTACTGCCTCGCCATATCACGCCGACCCATTTGCGTCAAAGAAATGTCT
TCTAGATTTGCAGTGGAGGTTGATTGTTGTAAACTAGATATTTGTGGGTG
TGTTGGTGTTTTAACTAAGACGCCGGAACCGCGCTGCTCTATGCACGCTG
ACGAGTTGTGCTCTCCTGTGACGGGTCATACTGTGAGGAAATTTGATGTG
CGTTTTTACGGGCGCGAGGTCGCGTTCGTCGTTGAGAATGGAGAGGTGTG
TGGTAATTGTTGAACCTTCAGTCTTGAGGTGTTGACGGTATCTTCTGTAG
GCGGGTATCATTTGTTCTGATAAATGATCAGTTTCGAGGCGCTTGTGTAC
TTTTTGAAACGCATTTCAGGGCCGCGTAAATACTCGAATTTGCCGAGATG
GGAGATCGAGTTGATTCGATAGTTCTCGTGAACAATAATTTTATGTGAAG
TTTCATGACGGCAAGGTGAAATGTTGTCTCTTAGTCTGCATGTAAAAGTG
TTGGAAGATGGTTATAAGTTTCTATCTTCTTATATTTTTGTTTCGGTGGA
TCTTTTTTTAATCTGTTTTGATCAGAAGCTTGGAGGCTTGCATGTTATGT
GTCGTGCACGTGCTTCCGGCTATCGAGTTCACAGAACGGCATTTGTGTGC
TCTGGTTGTTTGGGCGTTTGACCGTTCGGCGGAAATCTTGGCCGCTTTCT
TCGAGTCGTTGTGTATGGAATTGACGTGTTCTTTTGAATGCTATTGAGTA
TATTGGATCGCCACTCCATTTCTTGTCACTGACTGTAACCAATTACGACT
GTGTGCTTGCCGCTGAATTATTTGTACCTAGTGTAGAATTATGTTCTTGC
ATGGACGCGTTAAGTATCATATGCACTTGGCATGCCTAATTGCACTTCAG
ATATTTTGAGCTTTCTTTACGCCAGGGCCTTTGTAACTCTATCATGATCT
ATATGGATGAATGGTTGATGTTGCTTTTCAACGTTTCGGATGGGGTGGAG
CTGATTTGTAGTTCAAACCCTCCCAGTTCCCTCCTCCCCAGATCTTCCGT
ACCTTTGATGGTTGGATCTAATCTGGGCGAAGTGTATACTACGGTGAGGT
TTAGATTTCTGAGTTGTCGACAAATCATGGAAGAGCTGGGCACGAATAAG
GTAGTGCTGCTGATTCAATTTTATATAATGGACTGGTGTAGTTGTGAATG
AATGTCGTCGCATGTTTTAGCGTTTGTACTTAGTTTCCTTGATGAGGTTG
GTGTCAGGCGTTTGTGTTGGTGTTTGCTGCTGCTGCTGCTGTCATGCTCC
AATCTTTAGAGGGTGCGGAATATACGTGAGCGTTGGTGTAGGTTCATAAG
CAGCTGAAACTGCCGCTCGTCGCTACTTGTATCTGTAATATGCTTATTTT
TTCATCTTCCTTTGAGAGAAAGTTTTGAACCCCGAAGGACTAGTATCGTC
TACTTGCGCCTGCCTCTGTGCTCGTCTCGTTTGATTTCTAAAGTGGTGCT
TGGATCCAATTTCCGGAACCGCACCCCCTTGTTTGTTTTATTTGCGACAG
TTTCAGGGTCAGCTCATCTTTTCTCATAGACAAAAGGTCAACAGCTCCGT
TTGTTCTCTTGTTTATTTCGTGTGCGGAAATGTATGAGAATGCCAGCAAT
AGCAGTGTGTCTTCCGAATTGAGACCAACCTCCAAATAGTGAAATCTCTC
ACCGAAAGTCATGACTAGTGACCTTTATTCGGAGGGCGCCCAATGCCCCT
CGATCGCATTGTAACTGTTTTGGGCTTTTTCGCCACTTTATGCCCCCACA
GCGTTGTGCGAAAGCGCTCCTTTCGGGCTCAGTGTCGCAATTTACCTCTT
GGAATCGTGGCAGAAAGGGTCC
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Coding sequence (CDS) from alignment at H-paniculata_contig5409:2398..12919-

>mRNA_H-paniculata_contig5409.12850.1 ID=mRNA_H-paniculata_contig5409.12850.1|Name=mRNA_H-paniculata_contig5409.12850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1902bp|location=Sequence derived from alignment at H-paniculata_contig5409:2398..12919- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGAAGCTCCTGAGGTTGTTGGTGTTATTGCGCCTTTCCATCGCCTG
TTTGTCGGAAGCATCTAGTCACGAGTGCTCTCCTTTAGATGGCGAAGCTC
CTGAGGTTGTTGGTGTTATTGCGCCTTTCCATCGCCTGTTTGTCGGAAGC
ATCTAGTCACGAGTGCTCTCCTTTAGGCGGTTTGTGTTCAAGCGAGACGC
CATGCTGTGAAAGGACGCACGACTGCTTCGCTGGGAATTGCGACCTCGCA
GTGTACATACCGTCGCATGGCGGTTTGTGTTCAAGCGAGACGCCATGCTG
TGAAAGGACGCACGACTGCTTCGCTGGGAATTGCGACCTCGCAGTGTACA
TACCGTCGCATGGTGAAAAATGTGATGAAAAGTGTGGGCACTCTTGCTCC
ACGAGGGGTGAAGCTTGCGTGAACGGAATATGCACAGGCCCATCGGAAGA
TTGTTCGTCGCAAGGTGAAAAATGTGATGAAAAGTGTGGGCACTCTTGCT
CCACGAGGGGTGAAGCTTGCGTGAACGGAATATGCACAGGCCCATCGGAA
GATTGTTCGTCGCAAGGGGAAGAATGCAATGTGGAGAAAGGTTGCTGTGA
CCCCAGCCATGACTGCGTGCCATTATCCGATGCCCCATTACCGCCGATCT
GGGAACGCGCCGGAGTTTGCAAGGTTTCCAAAGCTCCCTCTACAGGGGAA
GAATGCAATGTGGAGAAAGGTTGCTGTGACCCCAGCCATGACTGCGTGCC
ATTATCCGATGCCCCATTACCGCCGATCTGGGAACGCGCCGGAGTTTGCA
AGGTTTCCAAAGCTCCCTCTACAGGCGATAAGTGCGATCAGAAGAACCCG
TGTCGGTTCCGATTTGATGCGTGCATCGACGGAGTATGTAAGGTCAGCTC
TGCGGGTCTGATCGACGTCTCAGCGATGACATTGGTACGTATGAGCTCTC
CTTCGTATGACCCGAGAACCGAACAGGAAGGGGGATGCGGAGTTAAGATG
GGGTGTGGACCTGCACGTACGCGTGACGGAAAGCTGAAATCGACGTCCCG
TTGGTCTTGCAGCGAGAAGCTCGGAAGGGGAAGGTGCGTGGTGAAGTACT
CTTTCGAGACACCGCAAGACCTACATAACCTGCGGATGGCGTTTCACGAA
GGCGACCGCTCGCGACATACTCTTCAGGCGATAAGTGCGATCAGAAGAAC
CCGTGTCGGTTCCGATTTGATGCGTGCATCGACGGAGTATGTAAGGTCAG
CTCTGCGGGTCTGATCGACGTCTCAGCGATGACATTGGTACGTATGAGCT
CTCCTTCGTATGACCCGAGAACCGAACAGGAAGGGGGATGCGGAGTTAAG
ATGGGGTGTGGACCTGCACGTACGCGTGACGGAAAGCTGAAATCGACGTC
CCGTTGGTCTTGCAGCGAGAAGCTCGGAAGGGGAAGGTGCGTGGTGAAGT
ACTCTTTCGAGACACCGCAAGACCTACATAACCTGCGGATGGCGTTTCAC
GAAGGCGACCGCTCGCGACATACTCTTCAGGTGTTGGCGGATGGTAAGGA
AATTGCATTGGTAAAGACGAGTGGGAAAACATTGGATTTCCAAGACTGGG
ACATTGACGCCAAGGCAGTTTCAACATTAGCTCTTCAGGCTGTGGATCTT
AATCCCAACTACTGGATTCACGTCACAGAGGTGTTGGCGGATGGTAAGGA
AATTGCATTGGTAAAGACGAGTGGGAAAACATTGGATTTCCAAGACTGGG
ACATTGACGCCAAGGCAGTTTCAACATTAGCTCTTCAGGCTGTGGATCTT
AATCCCAACTACTGGATTCACGTCACAGAGGTGGAGATCCTTACACGCAA
TCAGATGCCGTGCTGAGTGGAGATCCTTACACGCAATCAGATGCCGTGCT
GA
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