mRNA_H-paniculata_contig41270.10620.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig41270.10620.1
Unique NamemRNA_H-paniculata_contig41270.10620.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A8J5YMD5_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YMD5_9ROSI)

HSP 1 Score: 102 bits (254), Expect = 4.100e-21
Identity = 73/222 (32.88%), Postives = 113/222 (50.90%), Query Frame = 1
Query:    1 YVMFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDEEDFVTGHRGQQEHDGTLN--MEDLFSTPPVTPAVTRSHAEGEQASVPNTEDRTSASQMPPILPTHSLPAASANPFGEE-W--------KALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAAEQ 633
            Y +  +++R KL+ ++  G+F GY      YRI+    K +  SR+V+F+EE       G  + DGT    +E+  ++P + P    + AE +    P    RT A        T   P+  A    EE W        K + K  T E  +    P  +K I  KW+F+ K   D  + ++KA+LV +G+S+ +GVDFFET APVAR+ T+R +F LAA++
Sbjct:  165 YALVPAEKRTKLEKRSMPGVFVGYSRVKKGYRIFDPLTKKIIVSRDVKFNEE-------GYWKWDGTNASLLEEDQNSPDLQPPEIEAEAEDDYDDAPIRGTRTLADIYERCAMTIVEPSCYAKAVKEECWQEAMEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGFLNKHKARLVVKGYSQQQGVDFFETFAPVARLDTIRFLFALAAQK 376          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A8J6CTJ0_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CTJ0_9ROSI)

HSP 1 Score: 100 bits (248), Expect = 2.810e-20
Identity = 76/250 (30.40%), Postives = 121/250 (48.40%), Query Frame = 1
Query:    1 YVMFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDEEDFVTGHRGQQEHDGTLN--MEDLFSTPPVTPAVTRSHAEGEQASVPNTEDRTSASQMPPILPTHSLPAASANPFGE---------EWKALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAAEQTGILVAVYVDDLVIAGRREKVDELKHNL 717
            Y +  ++++ KL+ ++  G+F GY      YRI+    K +  SR+V+F+EE       G  + DGT    +E+  ++P + P    + AE +    P    R  A        T   P+  A    +         E K + K  T E  +    P  +K I  KW+F+ K   D S+ ++KA+LV +G+S+ +GVDFFET APVAR+ T+R +F LAA++         +   ++G   KV  LK  L
Sbjct:  509 YALVPAEKKTKLEKRSIPGVFVGYSSVKKGYRIFDPLTKKIIVSRDVKFNEE-------GYWKWDGTNASLLEEDQNSPDLQPTEIEAEAEDDYDDAPIRGTRILADIYERCAMTLVEPSCYAEAVKDKCWQEAMEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGSLKKHKARLVVKGYSQQQGVDFFETFAPVARLDTIRLLFTLAAQKQW-----KPEGFEVSGEEHKVYRLKKAL 743          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 99.0 bits (245), Expect = 7.200e-20
Identity = 70/223 (31.39%), Postives = 107/223 (47.98%), Query Frame = 1
Query:    1 YVMFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDEEDF----VTGHRGQQEHDGTLNMEDLFSTPPVTPAVTRSHAEGEQASVPNTEDRTSASQMPPILPTHSLPAASANPFGEEWKALVKK--------GTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAAEQ 633
            ++     +R+KLD ++   IF G+ E     ++          SR+V FDE+ F    V       E D    +  L +  P  P+    H   +   V    D   ++  P      ++  A   P    W+  +KK        GT   ED   LP G++A+ +KW+FK KLK D +V +YKA+LVAQGF++  GVD+ ET APV + +TLR +  LAA++
Sbjct:  718 WIRVPEDRRQKLDARSAPYIFIGFQEGVKGVKVLHPIKMRSTFSRDVVFDEDTFGIPEVEADAFPDEDDEEAQVNALLNPAPTVPSTDDHHDADDDEEV----DFALSAHGPQDQEPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLED---LPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQE 933          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A8J5YXK5_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YXK5_9ROSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.350e-19
Identity = 70/222 (31.53%), Postives = 110/222 (49.55%), Query Frame = 1
Query:    1 YVMFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDEEDFVTGHRGQQEHDGTLN--MEDLFSTPPVTPAVTRSHAEGEQASVPNTEDRTSASQMPPILPTHSLPAASANPFGE---------EWKALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAAEQ 633
            Y +  +++R KL+ ++  G+F GY      YRI+    K +  SR+V+F+EE       G  + DGT    +E+  ++P + P    +  + +    P    RT A            P+  A    E         E K + K  T E  +    P  +K I  KW+F+ K   D S+  +KA+LV +G+S+ +GVDFFET APVAR+ T+R +F LAA++
Sbjct:  585 YALVPAEKRTKLEKRSMPGVFVGYSSVKKGYRIFDPLTKKIIVSRDVKFNEE-------GYWKWDGTNASLLEEDQNSPDLQPTEIEAEVDDDYDDAPIRGTRTLADIYERCAMIIVEPSCYAEVVKEKCWQEALEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGSLNEHKARLVVKGYSQQQGVDFFETFAPVARLDTIRFLFALAAQK 796          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A6D2JCN6_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JCN6_9BRAS)

HSP 1 Score: 97.1 bits (240), Expect = 2.580e-19
Identity = 61/138 (44.20%), Postives = 82/138 (59.42%), Query Frame = 1
Query:  376 EEWKALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAA-----------EQTGILVAVYVDDLVIAGRR-EKVDELKHNLSRRFRMKDLGSL 753
            EE  ++VK  T +  D   LPAG KAI  KW+FK K   D S+ ++K++LVA+G+ +  GVDF E  APVAR+ T+R +  LAA           E+  +LVAVYVDDL++ G   E + E K  +S  F M DLG L
Sbjct:  362 EEISSIVKNKTWDLVD---LPAGAKAIGLKWVFKIKRNSDGSLNKHKSRLVAKGYVQKFGVDFEEVFAPVARIKTIRFLIALAASNGWEIHHLDEEEHILLVAVYVDDLLVTGSSLEMIIEFKRGMSANFEMSDLGKL 496          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A438BNH9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BNH9_VITVI)

HSP 1 Score: 97.1 bits (240), Expect = 2.890e-19
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 1
Query:  316 QMPPILPTHSLPAASANPFGEEWKALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAAEQTGILVA---------------VYVDDLVIAGR-REKVDELKHNLSRRFRMKDLGSL 753
            Q P     HS    +   +  E  AL K GT    D   LP G++ +  KWIF  K K D SV R+KA L+A+GF++  G+D+ ET APVA+++T+R +  LA  Q  +++                VYVDD++++G   E++ +LK  LS+ F +KDLG+L
Sbjct:  337 QFPTQYKRHSKFQNARRQYKIEIDALEKNGTWTITD---LPVGKRPVGCKWIFTIKYKADGSVERFKAHLLARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWLIILYLSRNLMPGKMAILIVYVDDIILSGNDMEELQKLKKYLSKEFEVKDLGNL 495          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: UPI00092F96E3 (uncharacterized protein LOC109344675 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F96E3)

HSP 1 Score: 90.9 bits (224), Expect = 6.280e-19
Identity = 56/124 (45.16%), Postives = 75/124 (60.48%), Query Frame = 1
Query:  433 LPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRT-----------VFCLAAEQTGI---LVAVYVDDLVIAGRREKVDELKHN---LSRRFRMKDLGSL 753
            LP  +KAIR KWIFK K   D SV RYKA+LVAQGF++ EGVD+ ET +PV +M+T+RT           V+ L     G+    + VYVDDL++ G    +D++ H    L  +F +KDLG L
Sbjct:   28 LPPDKKAIRCKWIFKTKHHVDGSVERYKARLVAQGFTQTEGVDYMETFSPVVKMTTIRTPPGLNISDPTLVYKLQKSIYGLKQATILVYVDDLILTGT--SIDQIIHTKTVLHNKFSIKDLGEL 149          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A438CQR1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CQR1_VITVI)

HSP 1 Score: 95.5 bits (236), Expect = 9.970e-19
Identity = 86/296 (29.05%), Postives = 137/296 (46.28%), Query Frame = 1
Query:    1 YVMFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDEEDF---VTGHRGQQEHDGTLNM---EDLFST-----PPVTPAVTRSHAEGEQASVPNTEDRTSASQMPPILPTHSLPAASANPFGEEWKALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAA---------------------------------EQTGILVAVYVDDLVIAGRR-EKVDELKHNLSRRFRMKDLGSL 753
            +V+FQ  +  KL+ ++    F GYDE    YR Y   +  ++  RNV F E      ++  R    +   L +   E L S+     PP+  ++   +A   Q +    +D     ++P   P    PA   +P  +    +  + +  + D   LP GQ  +  KWI+K K + D SV RYKA+ VA+GF++  G+D+ ET A VAR+S++R +  +AA                                 ++  IL+ +YVDD++I G     + ELK  LS++F MKDLG L
Sbjct:  250 FVLFQPHEHNKLEPRSRLCCFLGYDETQKGYRCYDPVSHRLRVFRNVVFWEHRLFVKLSHFRFSLTNSSVLEIFPNESLVSSTNTFDPPLDFSLDIFYASPRQVADEQIDD-----ELPHFEPGSPAPALPEDPPQD----IPPRHS--TRDLVTLPPGQSVVGCKWIYKIKTRSDGSVERYKARFVAKGFTQEYGIDYEETFALVARISSVRALLAVAAAPPRAWFAKFNSTIFHLGYTASPYDSALFLRRTDKGTILLLLYVDDMIITGDDLSGIQELKDFLSQQFEMKDLGHL 534          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A4Y2GYT7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GYT7_ARAVE)

HSP 1 Score: 95.1 bits (235), Expect = 1.290e-18
Identity = 74/209 (35.41%), Postives = 100/209 (47.85%), Query Frame = 1
Query:    1 YVMFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDEEDFVTGHRGQQEHDGTLNMEDLFSTPPVTPAVTRSHAEGEQASVPNTEDRTSASQMPPILPTHSLPAASANPFGEEWKALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLAA 627
            Y   Q Q+RRKLD KA  GIF GYD  S  YRIY+ +NK +  SR V+F E       +  +E    L  +D  +   V   +   H E          +RT      P      + +       EE ++L K  T +   P   P+G+K I  +W FK K     ++ RYKA+LVAQGFS+  G D+ ET APV   +T+RT    AA
Sbjct:  279 YAYIQKQKRRKLDSKAIEGIFLGYDYRSKGYRIYLGDNK-IMISRTVKFIENPPPYAKKEAKE----LQKQDETTQQLVE--LELEHEENHSMEEGEINERTEMEN--PYEKQKWIESTK-----EEMESLQKNETWKLVTP---PSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAA 470          
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Match: A0A2Z6MT47_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MT47_TRISU)

HSP 1 Score: 94.7 bits (234), Expect = 2.040e-18
Identity = 67/219 (30.59%), Postives = 107/219 (48.86%), Query Frame = 1
Query:    1 YVMFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDE-------EDFVTGHRGQQEHDGTLNMEDLFSTP--PVTPAVTRSHAEGEQASVPNTEDRTSASQMPPILPTHSLPAASANPF--GEEWKALVKKGTCESEDPGRLPAGQKAIRTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLRTVFCLA 624
            Y++   +QRRK+D K+  GIF GY  +S +YR+Y S  + +  S NV  D+       ++       Q + + T ++E+L  TP  P+T       ++G    V     +      P    T        N F   E W  + +            P G   I TKW++K K  ++ ++ R KA+LVAQG+++VEG+DF ET APVAR+ ++R +  +A
Sbjct:  753 YILIDREQRRKMDPKSDEGIFLGYSTNSRAYRVYNSRTQVMMESMNVVIDDVPSDPKTDESPDAEAFQFQPEETASVEELEVTPDSPITDNTIAPGSKGPSIRVQKNHPKDLIIGNPDEGITTRRNQEELNQFERSEVWDLVPR------------PKGMNVIGTKWVYKNKSDENGTITRNKARLVAQGYTQVEGLDFDETFAPVARLESIRLLLGVA 959          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41270.10620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J5YMD5_9ROSI4.100e-2132.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6CTJ0_9ROSI2.810e-2030.40Integrase catalytic domain-containing protein n=1 ... [more]
A0A5C3E5T1_9BASI7.200e-2031.39Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A8J5YXK5_9ROSI1.350e-1931.53Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A6D2JCN6_9BRAS2.580e-1944.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A438BNH9_VITVI2.890e-1937.04Retrovirus-related Pol polyprotein from transposon... [more]
UPI00092F96E36.280e-1945.16uncharacterized protein LOC109344675 n=1 Tax=Lupin... [more]
A0A438CQR1_VITVI9.970e-1929.05Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2GYT7_ARAVE1.290e-1835.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z6MT47_TRISU2.040e-1830.59Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41270contigH-paniculata_contig41270:78..1436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.5
Seed ortholog evalue1.2e-18
Seed eggNOG ortholog164328.Phyra87360
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3Q8Z1@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size753
Cds size747
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41270.10620.1prot_H-paniculata_contig41270.10620.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig41270 84..1436 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930258.7567194-UTR-H-paniculata_contig41270:77..831622930258.7567194-UTR-H-paniculata_contig41270:77..83Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig41270 78..83 +
1691481213.9092336-UTR-H-paniculata_contig41270:77..831691481213.9092336-UTR-H-paniculata_contig41270:77..83Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig41270 78..83 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930258.7767155-CDS-H-paniculata_contig41270:83..4521622930258.7767155-CDS-H-paniculata_contig41270:83..452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41270 84..452 +
1691481213.9224832-CDS-H-paniculata_contig41270:83..4521691481213.9224832-CDS-H-paniculata_contig41270:83..452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41270 84..452 +
1622930258.799244-CDS-H-paniculata_contig41270:794..10521622930258.799244-CDS-H-paniculata_contig41270:794..1052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41270 795..1052 +
1691481213.930912-CDS-H-paniculata_contig41270:794..10521691481213.930912-CDS-H-paniculata_contig41270:794..1052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41270 795..1052 +
1622930258.8220162-CDS-H-paniculata_contig41270:1316..14361622930258.8220162-CDS-H-paniculata_contig41270:1316..1436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41270 1317..1436 +
1691481213.9394732-CDS-H-paniculata_contig41270:1316..14361691481213.9394732-CDS-H-paniculata_contig41270:1316..1436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41270 1317..1436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig41270.10620.1

>prot_H-paniculata_contig41270.10620.1 ID=prot_H-paniculata_contig41270.10620.1|Name=mRNA_H-paniculata_contig41270.10620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
MFQSQQRRKLDDKAWAGIFPGYDEDSPSYRIYISENKSVQSSRNVRFDEE
DFVTGHRGQQEHDGTLNMEDLFSTPPVTPAVTRSHAEGEQASVPNTEDRT
SASQMPPILPTHSLPAASANPFGEEWKALVKKGTCESEDPGRLPAGQKAI
RTKWIFKRKLKKDDSVARYKAQLVAQGFSKVEGVDFFETSAPVARMSTLR
TVFCLAAEQTGILVAVYVDDLVIAGRREKVDELKHNLSRRFRMKDLGSL
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mRNA from alignment at H-paniculata_contig41270:78..1436+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig41270.10620.1 ID=mRNA_H-paniculata_contig41270.10620.1|Name=mRNA_H-paniculata_contig41270.10620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1359bp|location=Sequence derived from alignment at H-paniculata_contig41270:78..1436+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TATGTTATGTTCCAGTCGCAGCAGAGACGCAAGCTCGACGACAAAGCATG GGCGGGGATATTCCCGGGGTACGACGAGGACAGCCCGAGTTATCGCATAT ATATCTCGGAAAACAAGAGCGTCCAGTCGAGCAGGAACGTAAGATTTGAC GAAGAGGACTTCGTAACCGGTCATCGCGGACAGCAGGAGCACGACGGGAC GCTCAACATGGAAGATTTGTTTTCAACACCGCCAGTCACGCCAGCGGTCA CTCGATCCCACGCCGAAGGCGAGCAAGCAAGCGTACCTAACACGGAAGAC CGGACGTCGGCGTCACAAATGCCGCCGATATTACCGACACATTCGCTGCC AGCCGCCAGCGCTAATCCATTCGGTGTCTTGAACGATGATGATGACGAAA ATAACGGCGACTACATGATGAAAGATGTGAAGACTGCAGTCGAAGACGCA CCATCAGCAGGGACAGCCGCACCGGCGTCGCGGGGGAGCATCACGAAGCA GGCTGGGACGGAGGCGCAGCGTCCGCGAGATCGGTCACCCAATACGAACA CGGGTGAGAGCGGTGGAAAACCGCGAAGAAAATCCAGGCGCTACCGTGCG CGTGGCAAAAGTGGAAGGCACTGGCAACCTTACAGAGGCGGCATCTAAGG GGGAGCCGAATCCGCCGCAGAAACATTAAAGAGTCCAGAAGGGGAAAAAT AGCGCACGGGAATGGAGGAAGAATGGAAGGCGTTGGTGAAAAAAGGGACA TGCGAAAGCGAAGACCCGGGGAGGTTACCGGCAGGACAGAAGGCGATTCG TACGAAATGGATTTTCAAGCGGAAACTGAAGAAGGACGACAGCGTAGCAC GCTACAAAGCGCAACTGGTGGCTCAAGGTTTTTCAAAGGTGGAGGGTGTC GATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCGACGTTACGTAC TGTTTTTTGCCTGGCCGCCGAGCAGGTGTTCGAATTAGAAGGCATGGACA TAGATATGGCGTATTTGAACACCCCGGTAGAAGAAGAGCTATTTGTTAAG CTACCCCCCGAGGTTTCCCTTTCCTCGCGAGACATACCGTTTGTGCGCTG CCTGCGTAAAAGCCTGTATGGCCTCAAGCACAGCGGCCGCAACTGGAATA ACACTCTTGACGATTTTCTTGTTGGGATAGGACTCGACCGTTCCACTACC GACCCATGCTTGTACTTTGCTCGCGACGATTGGGGAGAGACAGGCATTCT GGTTGCCGTGTATGTTGACGACCTGGTCATTGCTGGCCGTCGCGAGAAAG TAGACGAGTTGAAGCATAACTTAAGTAGGCGTTTTAGGATGAAAGACTTG GGCTCTCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig41270:78..1436+

>mRNA_H-paniculata_contig41270.10620.1 ID=mRNA_H-paniculata_contig41270.10620.1|Name=mRNA_H-paniculata_contig41270.10620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig41270:78..1436+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCCAGTCGCAGCAGAGACGCAAGCTCGACGACAAAGCATGGGCGGG
GATATTCCCGGGGTACGACGAGGACAGCCCGAGTTATCGCATATATATCT
CGGAAAACAAGAGCGTCCAGTCGAGCAGGAACGTAAGATTTGACGAAGAG
GACTTCGTAACCGGTCATCGCGGACAGCAGGAGCACGACGGGACGCTCAA
CATGGAAGATTTGTTTTCAACACCGCCAGTCACGCCAGCGGTCACTCGAT
CCCACGCCGAAGGCGAGCAAGCAAGCGTACCTAACACGGAAGACCGGACG
TCGGCGTCACAAATGCCGCCGATATTACCGACACATTCGCTGCCAGCCGC
CAGCGCTAATCCATTCGGTATGTTCCAGTCGCAGCAGAGACGCAAGCTCG
ACGACAAAGCATGGGCGGGGATATTCCCGGGGTACGACGAGGACAGCCCG
AGTTATCGCATATATATCTCGGAAAACAAGAGCGTCCAGTCGAGCAGGAA
CGTAAGATTTGACGAAGAGGACTTCGTAACCGGTCATCGCGGACAGCAGG
AGCACGACGGGACGCTCAACATGGAAGATTTGTTTTCAACACCGCCAGTC
ACGCCAGCGGTCACTCGATCCCACGCCGAAGGCGAGCAAGCAAGCGTACC
TAACACGGAAGACCGGACGTCGGCGTCACAAATGCCGCCGATATTACCGA
CACATTCGCTGCCAGCCGCCAGCGCTAATCCATTCGGTGAAGAATGGAAG
GCGTTGGTGAAAAAAGGGACATGCGAAAGCGAAGACCCGGGGAGGTTACC
GGCAGGACAGAAGGCGATTCGTACGAAATGGATTTTCAAGCGGAAACTGA
AGAAGGACGACAGCGTAGCACGCTACAAAGCGCAACTGGTGGCTCAAGGT
TTTTCAAAGGTGGAGGGTGTCGATTTCTTTGAAACCAGTGCCCCCGTAGC
TCGCATGTCGACGTTACGTACTGTTTTTTGCCTGGCCGCCGAGCAGGAAG
AATGGAAGGCGTTGGTGAAAAAAGGGACATGCGAAAGCGAAGACCCGGGG
AGGTTACCGGCAGGACAGAAGGCGATTCGTACGAAATGGATTTTCAAGCG
GAAACTGAAGAAGGACGACAGCGTAGCACGCTACAAAGCGCAACTGGTGG
CTCAAGGTTTTTCAAAGGTGGAGGGTGTCGATTTCTTTGAAACCAGTGCC
CCCGTAGCTCGCATGTCGACGTTACGTACTGTTTTTTGCCTGGCCGCCGA
GCAGACAGGCATTCTGGTTGCCGTGTATGTTGACGACCTGGTCATTGCTG
GCCGTCGCGAGAAAGTAGACGAGTTGAAGCATAACTTAAGTAGGCGTTTT
AGGATGAAAGACTTGGGCTCTCTCACAGGCATTCTGGTTGCCGTGTATGT
TGACGACCTGGTCATTGCTGGCCGTCGCGAGAAAGTAGACGAGTTGAAGC
ATAACTTAAGTAGGCGTTTTAGGATGAAAGACTTGGGCTCTCTC
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