mRNA_H-paniculata_contig4074.10524.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4074.10524.1
Unique NamemRNA_H-paniculata_contig4074.10524.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 8.130e-83
Identity = 125/179 (69.83%), Postives = 144/179 (80.45%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQPPLGFWDPLGL+ED DQE+F+ LR  EVKHGRIAM+A+ GH+T QN R PG+LS+S NL+FADMPNG+ AL+KIPPAG+ QI  FI F+E+ VMK VEGSFPGD T GG NP+   W  MS E QA KR+IELNNGRAAQMGI  L+VHE +N  PYVINDLLG  YNF
Sbjct:    3 MSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGG-NPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNF 180          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 4.500e-81
Identity = 123/179 (68.72%), Postives = 144/179 (80.45%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQPPLGFWDPLGL+ D DQE+F+ LR  EVKHGRIAM+A+ GH+T QNVR PG+LS+S NL+FADMPNG+ AL+KIPPAG+ QI  F+ F+E+ VMK VEGSFPGD T GG NP+A  W  MS E Q  KR+IELNNGRAAQMGI  L+VHE +N  PY+INDLLG SY F
Sbjct:   40 MSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGG-NPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTF 217          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 1.400e-80
Identity = 123/179 (68.72%), Postives = 144/179 (80.45%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQPPLGFWDPLGL+ D DQE+F+ LR  EVKHGRIAM+A+ GH+T QNVR PG+LS+S +L+FADMPNG+ AL+KIPPAG+ QI  F+ F+E+ VMK VEGSFPGD T GG NP+A  W  MS E QA KR+IELNNGRAAQMGI  L+VHE +N  PYVINDLLG  Y F
Sbjct:   43 MSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGG-NPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTF 220          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 255 bits (651), Expect = 8.460e-80
Identity = 123/179 (68.72%), Postives = 142/179 (79.33%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQ PLGFWDPLGL+ D DQE+F+ LR  EVKHGRIAM+A+ GH+T QN R PG+LS+S NL+FADMPNG+ AL+KIPP G+ QI  FI F+E+ VMK VEGSFPGD T GG NP+A  W  MS E Q  KR+IELNNGRAAQMGI  L+VHE +N  PYVINDLLG SYNF
Sbjct:    4 MSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGG-NPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNF 181          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 255 bits (651), Expect = 2.740e-79
Identity = 122/179 (68.16%), Postives = 142/179 (79.33%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQ PLGFWDPLGL+ D DQE+F+ LR  EVKHGRIAM+A+ GH+T QN R PG+LS+S NL+FADMPNG+ AL+KIPPAG+ QI  FI F+E+ VMK VEGSFPGD T GG NP+   W  MS E QA KR+IELNNGRAAQMGI  L+VHE +N  PYVINDL+G SY F
Sbjct:   39 MSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGG-NPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTF 216          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 3.570e-79
Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQPPLGFWDPLGL+ED DQE+F+ LR  EVKHGRIAM+A+ GH+T QN R PG+LS+S NL+FADMPNG+ AL+KIPPAG+ QI  FI F+E+ VMK VEGSFPGD T GG NP+   W  MS E QA KR+IELNNGRAAQMGI  L+VHE +N  PYVINDLLG  Y F
Sbjct:  199 MSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGG-NPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTF 376          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 254 bits (648), Expect = 7.480e-79
Identity = 123/179 (68.72%), Postives = 142/179 (79.33%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQ PLGFWDPLGL+ED DQ+ F+ LR  EVK GRIAM+A+ GH+T QN R PG+LS+S NL+FADMPNG+ AL+KIPP G+ QI  FI F+E+ VMK VEGSFPGD T GG NP+A  W  MS E QA KR+IELNNGRAAQMGI  L+VHE +N  PYVINDLLG SYNF
Sbjct:   38 MSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGG-NPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNF 215          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 251 bits (641), Expect = 7.090e-78
Identity = 119/179 (66.48%), Postives = 141/179 (78.77%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQ PLGFWDPLGL+ D DQE+F+ LR  EVKHGRIAM+A+ GH+T QN R PG+LS+S NL+FADMPNG+ AL+KIPP G+ QI  FI F+E+ VMK VEGSFPGD   GG NP+A  W  MS E QA KR+IELNNGRAAQMGI G++VHE ++  PY+ NDLLG SY F
Sbjct:   33 MSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGG-NPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTF 210          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 242 bits (618), Expect = 2.040e-74
Identity = 118/179 (65.92%), Postives = 138/179 (77.09%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLGMSYNF 537
            MS+E EIGAQPP+GFWDPLGLV D DQE+FD LR  E+KHGRIAM+AV+GHIT QN R PG+LS  ENLAFAD PNG+ A +KIPP G LQI+L I   E+ V+KQVEGSFPGD T GG N +   W  MS E QA KR+IELNNGRAAQMGI  ++VHE ++  PY+INDL G +Y F
Sbjct:   34 MSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGG-NIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQF 211          
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Match: Q9FEP5_SACLA (Light harvesting protein lhcf3 (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=Q9FEP5_SACLA)

HSP 1 Score: 231 bits (588), Expect = 3.790e-70
Identity = 111/174 (63.79%), Postives = 137/174 (78.74%), Query Frame = 1
Query:    1 MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLGHITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFMEVGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQMGIFGLVVHESINGHPYVINDLLG 522
            MS+E E+G Q PLG+WDPL  +E+ DQE+FD LR  E+KHGRI M+A+LGHI  +NVR PG+LS S + +FADMPNGLGAL+K+ P G+ QI++FI F+EV VMKQ EGSFPGDM+    NP+ KQW     E + +KR+IELNNGRAAQMGIFGL+VHE IN  PYVIN+LLG
Sbjct:   19 MSFENELGVQAPLGYWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHIVQENVRLPGMLSFSNDQSFADMPNGLGALSKMGPIGVAQIVIFIGFLEVFVMKQKEGSFPGDMSRV--NPFEKQWDSFDEETKLRKRAIELNNGRAAQMGIFGLIVHEVINNQPYVINNLLG 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4074.10524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDS8_9PHAE8.130e-8369.83LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KCX6_9PHAE4.500e-8168.72LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A6H5JHT6_9PHAE1.400e-8068.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
FCPD_MACPY8.460e-8068.72Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
FCPB_MACPY2.740e-7968.16Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
D8LNK6_ECTSI3.570e-7969.27Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
FCPC_MACPY7.480e-7968.72Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
FCPF_MACPY7.090e-7866.48Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
FCPE_MACPY2.040e-7465.92Fucoxanthin-chlorophyll a-c binding protein E, chl... [more]
Q9FEP5_SACLA3.790e-7063.79Light harvesting protein lhcf3 (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4074contigH-paniculata_contig4074:12870..14323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.5
Seed ortholog evalue7.5e-68
Seed eggNOG ortholog2880.D7FWR1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S3EU@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1454
Cds size543
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930246.4168434-CDS-H-paniculata_contig4074:12869..134121622930246.4168434-CDS-H-paniculata_contig4074:12869..13412Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4074 12870..13412 +
1691481208.5681458-CDS-H-paniculata_contig4074:12869..134121691481208.5681458-CDS-H-paniculata_contig4074:12869..13412Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4074 12870..13412 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930246.431454-UTR-H-paniculata_contig4074:13412..143231622930246.431454-UTR-H-paniculata_contig4074:13412..14323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4074 13413..14323 +
1691481208.5814884-UTR-H-paniculata_contig4074:13412..143231691481208.5814884-UTR-H-paniculata_contig4074:13412..14323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4074 13413..14323 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4074.10524.1prot_H-paniculata_contig4074.10524.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4074 12870..13412 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4074.10524.1

>prot_H-paniculata_contig4074.10524.1 ID=prot_H-paniculata_contig4074.10524.1|Name=mRNA_H-paniculata_contig4074.10524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
MSYEKEIGAQPPLGFWDPLGLVEDVDQEQFDYLRLAEVKHGRIAMIAVLG
HITAQNVRFPGLLSSSENLAFADMPNGLGALAKIPPAGILQILLFIFFME
VGVMKQVEGSFPGDMTYGGQNPWAKQWAKMSPEQQAKKRSIELNNGRAAQ
MGIFGLVVHESINGHPYVINDLLGMSYNFP*
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mRNA from alignment at H-paniculata_contig4074:12870..14323+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4074.10524.1 ID=mRNA_H-paniculata_contig4074.10524.1|Name=mRNA_H-paniculata_contig4074.10524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1454bp|location=Sequence derived from alignment at H-paniculata_contig4074:12870..14323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGTACGAAAAGGAGATCGGCGCCCAACCCCCGCTGGGCTTCTGGGA CCCGCTTGGCCTTGTCGAGGACGTCGACCAAGAGCAGTTTGACTACCTCC GGCTAGCGGAGGTGAAGCACGGCCGTATCGCAATGATCGCCGTCCTGGGG CACATCACTGCGCAGAACGTGCGTTTCCCGGGTCTCCTGTCGAGCTCCGA GAACTTGGCGTTCGCGGACATGCCGAACGGACTTGGCGCACTGGCCAAGA TCCCCCCCGCGGGCATCTTACAGATCTTGTTGTTCATCTTCTTCATGGAG GTGGGCGTGATGAAGCAGGTGGAGGGATCCTTCCCTGGCGACATGACGTA CGGCGGACAGAACCCATGGGCCAAGCAGTGGGCTAAAATGTCGCCCGAGC AACAGGCGAAAAAGCGCTCGATCGAGCTCAACAACGGGCGCGCGGCGCAG ATGGGGATCTTTGGCCTGGTGGTGCACGAGTCGATCAACGGACACCCGTA CGTGATCAACGACCTCCTCGGAATGTCGTACAACTTCCCTTGAACAGAAT AGGATTTGGATAACAAATCAGATTCGTTTTTTTCGCTGTTTGATTTGCTT TTTACAAGACCAAACGGCATATTCCTCCCTCCTTAGATTCTCTTCGGGGC CGGCGTTCTGATGAACGCGTGGAGGGGTACCCCTTTTTTGTATTTCATGT CGTTTGTTCGGCAAAAGGCGAGCAGTCAGCTGGTTAGGTGGGGCGCGCTG TGGTTTTTTTAGTGAAGAACCCTCGCAGGTATTCTCCCATGAGCTCTGGT TTTCTCGTTTGCCTTTTTGAGCGGTCGTGATTGTAGAAGAGTGGAGGTGA CCGCGGTTTTGATCTTCTGATAAGAGTAGTGCTTATCGATGGTCCTGCTA GAGCTCTGCTCTGATAGCGTTGTTGTCCAGCTTCCATTAAAAGGGACGAA TATATGCACACGTTGGTTCCTTGATTACGTAGACACAGCTGACAGGCATC GGGTTGGGGGCGGGGGCGGGGAAAATTTGGAAATAATATTGCAAGTTGGA TATTATCTGTACGCCGTTGTGCGTCTTTTAGCATCGTTAAAGCAAATATT TCAATTTACTTTTGTCCTTTCACTGCTGATTGTCTCTCACAAGCACCCGA ACAGTTGAAGTTCGGCGTCGCTGCACTTGTCCATGACGGGTCATTACTTT TGGTGCAAATTAAGGGTGGAGCCAGGTTTTGTTTTGTAACACATGCAAAA ATGCAGCCACACCCGTGGTGCTCGTCGTTATAGATTCACGTACACCGATA CATGCCGCGCGACTGTGGAGCTAGTGTAACGTGAAAGACATCAAATGACC GGTATTGAATGACGTCGAGGCTAATCAACCGTAGATGAGGTAATTCATGG ATGATCATGCCGACTAAAAACAACGCGAAATGTCCCATGGAAAATGCTTT GGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig4074:12870..14323+

>mRNA_H-paniculata_contig4074.10524.1 ID=mRNA_H-paniculata_contig4074.10524.1|Name=mRNA_H-paniculata_contig4074.10524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig4074:12870..14323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGTACGAAAAGGAGATCGGCGCCCAACCCCCGCTGGGCTTCTGGGA
CCCGCTTGGCCTTGTCGAGGACGTCGACCAAGAGCAGTTTGACTACCTCC
GGCTAGCGGAGGTGAAGCACGGCCGTATCGCAATGATCGCCGTCCTGGGG
CACATCACTGCGCAGAACGTGCGTTTCCCGGGTCTCCTGTCGAGCTCCGA
GAACTTGGCGTTCGCGGACATGCCGAACGGACTTGGCGCACTGGCCAAGA
TCCCCCCCGCGGGCATCTTACAGATCTTGTTGTTCATCTTCTTCATGGAG
GTGGGCGTGATGAAGCAGGTGGAGGGATCCTTCCCTGGCGACATGACGTA
CGGCGGACAGAACCCATGGGCCAAGCAGTGGGCTAAAATGTCGCCCGAGC
AACAGGCGAAAAAGCGCTCGATCGAGCTCAACAACGGGCGCGCGGCGCAG
ATGGGGATCTTTGGCCTGGTGGTGCACGAGTCGATCAACGGACACCCGTA
CGTGATCAACGACCTCCTCGGAATGTCGTACAACTTCCCTTGAATGTCGT
ACGAAAAGGAGATCGGCGCCCAACCCCCGCTGGGCTTCTGGGACCCGCTT
GGCCTTGTCGAGGACGTCGACCAAGAGCAGTTTGACTACCTCCGGCTAGC
GGAGGTGAAGCACGGCCGTATCGCAATGATCGCCGTCCTGGGGCACATCA
CTGCGCAGAACGTGCGTTTCCCGGGTCTCCTGTCGAGCTCCGAGAACTTG
GCGTTCGCGGACATGCCGAACGGACTTGGCGCACTGGCCAAGATCCCCCC
CGCGGGCATCTTACAGATCTTGTTGTTCATCTTCTTCATGGAGGTGGGCG
TGATGAAGCAGGTGGAGGGATCCTTCCCTGGCGACATGACGTACGGCGGA
CAGAACCCATGGGCCAAGCAGTGGGCTAAAATGTCGCCCGAGCAACAGGC
GAAAAAGCGCTCGATCGAGCTCAACAACGGGCGCGCGGCGCAGATGGGGA
TCTTTGGCCTGGTGGTGCACGAGTCGATCAACGGACACCCGTACGTGATC
AACGACCTCCTCGGAATGTCGTACAACTTCCCTTGA
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