|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Bacteria |
| Seed ortholog score | 62.0 |
| Seed ortholog evalue | 6.4e-07 |
| Seed eggNOG ortholog | 1163407.UU7_07063 |
| Preferred name | ank2 |
| KEGG rclass | RC00063,RC00318 |
| KEGG ko | ko:K01243,ko:K06867 |
| KEGG Reaction | R00194,R01401 |
| KEGG Pathway | ko00270,ko01100,ko01230,map00270,map01100,map01230 |
| KEGG Module | M00034,M00609 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | ankyrin repeat |
| EggNOG OGs | 1RBYV@1224,1SE9G@1236,1X3VM@135614,COG0666@1,COG0666@2 |
| EC | 3.2.2.9 |
| COG Functional cat. | S |
| Best tax level | Xanthomonadales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Exons | 1 |
| Model size | 1062 |
| Cds size | 1062 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31876.8585.1 >prot_H-paniculata_contig31876.8585.1 ID=prot_H-paniculata_contig31876.8585.1|Name=mRNA_H-paniculata_contig31876.8585.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=354bp
MHRAAYMGDVHRVMTCLQENPGINLDALSADGSSALYIACTNGHSSVASV
LIRAGADANLRCGPTELTPLHASVSGGHIGMLRQLVEAGGDLSIRASRGL
AVAHLAVLADSQEGLHEVVKLGADLDVQDHCGMTALMICAGYPNTENASG
KAQILLNGGAHLDLVDAKGETALLFAVNSENYGVLQVLLDAGASLTDRSS
AGETAVMTAAANGYLEVVRLLCDAGADLSDRNSMDYTPLMMAATNGHSKV
VQLLRDAGADISDHDGAGVTALVVAAYEGKLEMVQYLIEAGASIMPVIAT
GASPLQAAAVNGHTEIVQELISAGADVNHSSREFNVGMTAMHLAAGESHV
DTVR back to topmRNA from alignment at H-paniculata_contig31876:741..1802- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig31876.8585.1 ID=mRNA_H-paniculata_contig31876.8585.1|Name=mRNA_H-paniculata_contig31876.8585.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig31876:741..1802- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATAGAGCCGCGTATATGGGTGATGTCCATCGGGTGATGACGTGTTT
ACAAGAGAACCCGGGCATCAACCTGGATGCACTCAGCGCAGATGGGAGCA
GTGCTCTCTACATTGCGTGCACTAATGGACACTCTAGCGTTGCAAGTGTG
CTTATCAGGGCAGGGGCTGACGCTAACCTTAGGTGTGGACCAACCGAATT
GACGCCTCTCCATGCATCTGTTTCTGGTGGACACATTGGGATGTTACGAC
AATTGGTAGAGGCGGGTGGGGATCTCTCGATCAGGGCGTCCCGGGGTCTG
GCCGTTGCCCATTTGGCGGTACTAGCGGATTCTCAAGAAGGACTGCACGA
GGTGGTGAAGCTAGGAGCGGACCTAGATGTGCAGGACCACTGCGGGATGA
CTGCTCTGATGATATGTGCAGGTTACCCAAACACGGAGAATGCGTCGGGA
AAAGCTCAAATCTTGCTGAACGGCGGGGCTCATTTGGACCTCGTCGATGC
CAAGGGCGAGACTGCTCTACTGTTCGCTGTCAACTCAGAAAATTACGGTG
TCCTACAGGTGCTCCTCGACGCAGGCGCAAGCTTGACTGACCGTAGTAGT
GCCGGTGAAACAGCCGTGATGACAGCTGCTGCCAACGGATACTTGGAGGT
GGTGCGACTCCTTTGCGATGCTGGGGCAGACTTGTCTGACCGCAACAGCA
TGGATTACACGCCCTTAATGATGGCAGCTACAAACGGGCACTCGAAGGTT
GTGCAGCTCCTGCGCGATGCTGGGGCGGACATATCTGACCACGATGGTGC
AGGTGTCACGGCCTTGGTTGTTGCTGCTTATGAGGGAAAGTTGGAGATGG
TGCAGTATCTTATCGAGGCGGGGGCAAGCATCATGCCAGTAATAGCCACG
GGCGCCTCCCCTTTGCAAGCGGCTGCGGTCAACGGGCACACGGAGATCGT
GCAGGAACTGATATCAGCTGGTGCGGACGTGAACCACAGCTCAAGAGAAT
TTAATGTCGGCATGACCGCGATGCACCTTGCCGCCGGCGAGAGTCACGTA
GACACAGTTCGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig31876:741..1802- >mRNA_H-paniculata_contig31876.8585.1 ID=mRNA_H-paniculata_contig31876.8585.1|Name=mRNA_H-paniculata_contig31876.8585.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at H-paniculata_contig31876:741..1802- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATAGAGCCGCGTATATGGGTGATGTCCATCGGGTGATGACGTGTTT
ACAAGAGAACCCGGGCATCAACCTGGATGCACTCAGCGCAGATGGGAGCA
GTGCTCTCTACATTGCGTGCACTAATGGACACTCTAGCGTTGCAAGTGTG
CTTATCAGGGCAGGGGCTGACGCTAACCTTAGGTGTGGACCAACCGAATT
GACGCCTCTCCATGCATCTGTTTCTGGTGGACACATTGGGATGTTACGAC
AATTGGTAGAGGCGGGTGGGGATCTCTCGATCAGGGCGTCCCGGGGTCTG
GCCGTTGCCCATTTGGCGGTACTAGCGGATTCTCAAGAAGGACTGCACGA
GGTGGTGAAGCTAGGAGCGGACCTAGATGTGCAGGACCACTGCGGGATGA
CTGCTCTGATGATATGTGCAGGTTACCCAAACACGGAGAATGCGTCGGGA
AAAGCTCAAATCTTGCTGAACGGCGGGGCTCATTTGGACCTCGTCGATGC
CAAGGGCGAGACTGCTCTACTGTTCGCTGTCAACTCAGAAAATTACGGTG
TCCTACAGGTGCTCCTCGACGCAGGCGCAAGCTTGACTGACCGTAGTAGT
GCCGGTGAAACAGCCGTGATGACAGCTGCTGCCAACGGATACTTGGAGGT
GGTGCGACTCCTTTGCGATGCTGGGGCAGACTTGTCTGACCGCAACAGCA
TGGATTACACGCCCTTAATGATGGCAGCTACAAACGGGCACTCGAAGGTT
GTGCAGCTCCTGCGCGATGCTGGGGCGGACATATCTGACCACGATGGTGC
AGGTGTCACGGCCTTGGTTGTTGCTGCTTATGAGGGAAAGTTGGAGATGG
TGCAGTATCTTATCGAGGCGGGGGCAAGCATCATGCCAGTAATAGCCACG
GGCGCCTCCCCTTTGCAAGCGGCTGCGGTCAACGGGCACACGGAGATCGT
GCAGGAACTGATATCAGCTGGTGCGGACGTGAACCACAGCTCAAGAGAAT
TTAATGTCGGCATGACCGCGATGCACCTTGCCGCCGGCGAGAGTCACGTA
GACACAGTTCGCATGCATAGAGCCGCGTATATGGGTGATGTCCATCGGGT
GATGACGTGTTTACAAGAGAACCCGGGCATCAACCTGGATGCACTCAGCG
CAGATGGGAGCAGTGCTCTCTACATTGCGTGCACTAATGGACACTCTAGC
GTTGCAAGTGTGCTTATCAGGGCAGGGGCTGACGCTAACCTTAGGTGTGG
ACCAACCGAATTGACGCCTCTCCATGCATCTGTTTCTGGTGGACACATTG
GGATGTTACGACAATTGGTAGAGGCGGGTGGGGATCTCTCGATCAGGGCG
TCCCGGGGTCTGGCCGTTGCCCATTTGGCGGTACTAGCGGATTCTCAAGA
AGGACTGCACGAGGTGGTGAAGCTAGGAGCGGACCTAGATGTGCAGGACC
ACTGCGGGATGACTGCTCTGATGATATGTGCAGGTTACCCAAACACGGAG
AATGCGTCGGGAAAAGCTCAAATCTTGCTGAACGGCGGGGCTCATTTGGA
CCTCGTCGATGCCAAGGGCGAGACTGCTCTACTGTTCGCTGTCAACTCAG
AAAATTACGGTGTCCTACAGGTGCTCCTCGACGCAGGCGCAAGCTTGACT
GACCGTAGTAGTGCCGGTGAAACAGCCGTGATGACAGCTGCTGCCAACGG
ATACTTGGAGGTGGTGCGACTCCTTTGCGATGCTGGGGCAGACTTGTCTG
ACCGCAACAGCATGGATTACACGCCCTTAATGATGGCAGCTACAAACGGG
CACTCGAAGGTTGTGCAGCTCCTGCGCGATGCTGGGGCGGACATATCTGA
CCACGATGGTGCAGGTGTCACGGCCTTGGTTGTTGCTGCTTATGAGGGAA
AGTTGGAGATGGTGCAGTATCTTATCGAGGCGGGGGCAAGCATCATGCCA
GTAATAGCCACGGGCGCCTCCCCTTTGCAAGCGGCTGCGGTCAACGGGCA
CACGGAGATCGTGCAGGAACTGATATCAGCTGGTGCGGACGTGAACCACA
GCTCAAGAGAATTTAATGTCGGCATGACCGCGATGCACCTTGCCGCCGGC
GAGAGTCACGTAGACACAGTTCGC back to top
|