mRNA_H-paniculata_contig14969.2950.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14969.2950.1
Unique NamemRNA_H-paniculata_contig14969.2950.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 169 bits (427), Expect = 1.590e-42
Identity = 108/331 (32.63%), Postives = 172/331 (51.96%), Query Frame = 3
Query:  420 VLYRDDGGEADLLVAVYVDDLVITGRRE-KVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK------------------------------------CTV------LTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLRNLL 1283
            +  +++GGE   ++AVYVDD+++ G+ + K++  K  + ++F+MKD+G L   LG+KV     +  I I Q +Y + VL+                                    C V       T+TRPDIAYA+   AR   DP  E +   KRI  YL+   D+G+ + G+       G+ D DW  ++DDRKS +GYVF ++ +AIS  S+KQ  V  S+ EAEY+A   A +E V+L+   + + + +  G   I+  +     ++K +  H R K+I +++H  RE V    + LEY  T + +A + TKGL+ VQF +LR +L
Sbjct:  163 IYVKEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDL-KSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 491          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 168 bits (425), Expect = 1.070e-41
Identity = 106/319 (33.23%), Postives = 167/319 (52.35%), Query Frame = 3
Query:  420 VLYRDDGGEADLLVAVYVDD-LVITGRREKVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK------CT----------------------------------VLTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNR 1253
            V Y+ D G   +++A+YVDD L+++   + V+  K N+  RF M DLG    +L +++ RDRP   + +SQ  Y+ + L+      C                                    + RTRPD+A+A+   ++    P +E +    R+Y YL   SD  + ++GT+    L G+VD DW  +++DR+SVTG+VF ++G+A++  S+KQ     SSTEAEY+A     KE ++LR   + I +  + G   ++  +     L+K    H RTK+I VR+H  RE    G +T EYV TG+++A VLTKGL R
Sbjct:  803 VFYKVDNGTL-VIIAIYVDDMLILSDDIDAVNTLKANLKSRFEMTDLGEARWILSMEILRDRPRRLLELSQHQYVEKALERHGMADCRPVSTPMAQNQKHLKLPQAEIDPKPYQSALGSLMYAMLRTRPDLAFAVGALSQHAATPGKEHWHALMRVYRYLRGTSDRRLVYNGTAKEKHLLGYVDADWAADINDRRSVTGFVFLISGAAVTWSSKKQSSTAQSSTEAEYMAGAHGTKEAIWLRAFLSEIGQ-AISGSTPLLIDNQSAIALAKNPEFHNRTKHIAVRYHFIREKYDSGDITPEYVPTGNQVADVLTKGLAR 1119          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 163 bits (413), Expect = 8.240e-41
Identity = 105/331 (31.72%), Postives = 170/331 (51.36%), Query Frame = 3
Query:  420 VLYRDDGGEADLLVAVYVDDLVITGRRE-KVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK------------------------------------CTV------LTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLRNLL 1283
            +  +++GGE   ++AVYVDD+++ G+ + K++  K  + ++F+MKD+G     LG+KV +   +  I I Q +Y + VL+                                    C V       T+TRPDIAYA+   AR    P  E +   KRI  YL+   D+G+ + G+       G+ D DW  ++DDRKS +GYVF ++ +AIS  S+KQ  V  S+ EAEY+    A +E V+L+   + + + +  G   I+  +     ++K +  H R K+I +++H  RE V    + LEY  T + +A + TKGL+ VQF +LR +L
Sbjct:  311 IYVKEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDL-KSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 639          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 161 bits (408), Expect = 1.940e-39
Identity = 111/315 (35.24%), Postives = 163/315 (51.75%), Query Frame = 3
Query:  453 LLVAVYVDDLVITGRR-EKVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK------CT----------------------------------VLTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLR 1274
            L+V+VYVDDL+ TG   E ++ FK+++ + F M DLG +   LG++V +D     I I+Q  Y  E++K      C                                    LT TRPD+ ++++  +R ME P  +     KRI  Y+    DLGI +        L GFVD D+  +VDDRKS +GYVF L G AI+  S+KQ +VT S+TEAE+V+A     + V+LR+    I   R +G   +   +     LSK    H R+K+I VR+H  RE V+EG + L+Y  T D++A ++TK + R  F+ LR
Sbjct: 1014 LVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERG--IFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYE-RGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIG-CRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELR 1324          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 154 bits (388), Expect = 2.140e-39
Identity = 110/324 (33.95%), Postives = 165/324 (50.93%), Query Frame = 3
Query:  429 RDDGGEADLLVAVYVDDLVITGRREKV-DNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK------CTV----------------------------------LTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVW-GHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLR 1274
            + +GG + L++++YVDDL+ T   E + D+FK ++ + F M DLG +   LG++V +D     I ISQ  Y  E LK      C                                    LT TRPD+ Y+++  +R ME+P  E     K I  Y+   +  GI +        L G+VD D+  + DDRKS +G+ F   G A+S  S+KQ +VT S+TEAEYVAA     + V++R+  T I     QGD  +++  +     LSK    H R+K+I VR+H  RE V EGI++ EY  T ++LA ++TK +    F++LR
Sbjct:   17 KTEGGNS-LIISLYVDDLIYTSNSESMLDSFKKSMQEEFSMTDLGKMKYCLGVEVIQDEAG--IFISQRKYALETLKKYGMQDCNAVRNPMVPGNKLTKRGAGEEVDPTAYKQLVGSLRYLTATRPDLIYSVNVVSRYMENPREEHMMAVKHIMRYVKGTAGFGIQYL-CGGEEKLVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFG--QGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEKLR 334          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: A0A0A9YPH4_LYGHE (Copia protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YPH4_LYGHE)

HSP 1 Score: 153 bits (387), Expect = 3.060e-39
Identity = 104/326 (31.90%), Postives = 164/326 (50.31%), Query Frame = 3
Query:  423 LYRDDGGEADLLVAVYVDDLVITGRR-EKVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK----------------------------------------CTVLTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVW-GHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLR 1274
            LY     +  L V ++VDDL+I G    +++ FKHN+  +F M DLG +   LG+ + RDR N T+ I Q  YI+++L                                           ++  +RPD+ +AI+  +R  E P  E +   KR+  Y+   + LG+ +S     + L GFVD DWV +VDDR+SV+GY     G+ +S  ++KQ  V+ SSTEAEYVA   A  E + L      +N   ++ D  +++  +    +L++      R K+I ++ H  RE V EG++ L YV T ++ A +LTKGL++  F+ LR
Sbjct:   15 LYIKSETDHRLYVFLFVDDLLIIGNNLNEIERFKHNLRNQFEMSDLGEVKNFLGLTIERDRSNKTMKIHQKDYIQKLLIKFGMDYSKPIGTPVEKNLKLNFNKSHQTLDKPYRELIGSIIYLMIGSRPDLCFAINFFSRYQESPTVEHWNYLKRVLRYIRGSAHLGLLYSDKKCEYVLSGFVDADWVGDVDDRRSVSGYCMYACGNIVSWATKKQTTVSLSSTEAEYVALSSAVCEAISLNG---VVNDLGLKSDFVMLFEDNQSCIHLARNRENSKRIKHIDIKHHFIREKVDEGVIKLNYVSTSEQNADILTKGLDKQSFEYLR 337          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 160 bits (405), Expect = 5.020e-39
Identity = 119/341 (34.90%), Postives = 167/341 (48.97%), Query Frame = 3
Query:  420 VLYRDDGGEADLLVAVYVDDLVITGRREKVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLKCTVLTR-----------------------------------------------TRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINR-------FRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLRNL 1280
            V Y+ +G E+ ++VA  VDDL ITG  + VD F  +I QRF M DLG L  +LGI+VRRDR   TI ISQ SYI  ++    L                                                 TRPDI +A+   ++ M++P R  +   KR+  YL    +L + + GT+N  GL G+ D DW  + + R S++GYVF L+G AIS  S+KQ +V  SSTEAEY+A   A KE ++LR   + I          R+  D+           L+K +  H RTK+I +R+H  RE V    + LE+ +T D  A + TK L R + + L  L
Sbjct: 1211 VFYKREG-ESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVY-GTNN-EGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPVRLHSDNRSAIA------LAKDNAFHSRTKHIDIRFHFIREAVDNRDIVLEHRRTEDMPADLFTKALPRAKLEHLSRL 1542          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 158 bits (400), Expect = 2.200e-38
Identity = 107/326 (32.82%), Postives = 164/326 (50.31%), Query Frame = 3
Query:  414 MLVLYRDDGGEADLLVAVYVDDL-VITGRREKVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK----------------------------------------CTVLTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQR 1268
            + V +RD  G   L++ +YVDD+   +   E +   K  +++ F + DLG +  +LG++V RDR    +T+SQ  YI +VL+                                           +  TRPDIAYA+   ++    P  E +    R + YL   +D  + ++G      L G+VD DW  + +DR+S++GYVF L G+AIS  S+KQQ V  SSTEAEY+AA  A KE V+LR   + + R  ++    ++  +     L+K    H  TK+I VR H  R+ V +G +  EY+ T D++A VLTKGL+R +  R
Sbjct: 1074 VFVFHRDSDGTL-LIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEIDARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDL-RQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREKHDR 1397          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 152 bits (383), Expect = 2.280e-38
Identity = 109/338 (32.25%), Postives = 170/338 (50.30%), Query Frame = 3
Query:  384 DRIRPFYYRLMLVLYRDDGGEADLLVAVYVDDLVITGRR-EKVDNFKHNINQRFRMKDLGSLSRVLGIKVRRDRPNGTITISQGSYIREVLK------CTV----------------------------------LTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLR 1274
            ++    YY   L + ++  G++ L+V++YVDDL+ TG     ++ FK ++ + F M DLG +   LG++V +D     I I+Q  Y  E LK      C                                    LT TRPD+ Y+++  +R ME+P  +     KRI  Y+      GI +     G  L GFVD D+  +VDDRKS +GYVF L G A+S  S+KQ +VT S+TEAE+VAA     + ++LR+    I   + +G   +   +     LSK    H R+K+I VR++  R+ V E ++ L++  T D+L+ ++TK +    F+RLR
Sbjct:   35 EKFEKCYYEHTLFVKKE--GDSILIVSLYVDDLIYTGNSLTMLEEFKQSMMKEFAMTDLGKMKFFLGVEVIQDGRG--IFINQQKYAEETLKKYGMEGCNAVKNPIVPGNKLSRAGGGDAADPTMFKQLVGSLRYLTATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGT-TLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERLR 366          
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F)

HSP 1 Score: 150 bits (379), Expect = 3.090e-38
Identity = 105/315 (33.33%), Postives = 159/315 (50.48%), Query Frame = 3
Query:  456 LVAVYVDDLVITGRREKV-DNFKHNINQRFRMKDLGSLSRVLGIKVRRD------------------------RPNGTIT--------------ISQGSYIREVLKCTVLTRTRPDIAYAIHQAARRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVENVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRD*FTTINRFRMQGDHDIVWGHYIRYYLSKGSGAHCRTKYIGVRWHRNREWVREGILTLEYVQTGDRLAGVLTKGLNRVQFQRLRNLL 1283
            +V +YVDDL+ TG   K+ D FK ++   F M DLG +   LG++V +                         +P GT                +    Y + +     LT TRPDI YA+   +R ME P        KRI  Y+    D G+ F    +G G  G+ D D+  ++DDRKS +G++F LN  AIS  S+KQQ+VT SSTEAEYVAA  +  + ++LR  F  +   + +G   I   +     LS+    H R+K+I VR+H  R+   +  + LEY ++G+++A +LTK L +  F++LR++L
Sbjct:    1 MVCLYVDDLIFTGSDAKMFDEFKKSMMMEFEMTDLGLMHYFLGLEVIQTTAGNFIYQKKYAQDILNRFQMDDCKPFGTPAEYGLKLCKDKGGKEVDSTFYKQIIGSLMYLTYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQ-KGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDEKIVLEYCKSGEQVADILTKPLKQPAFEKLRSML 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14969.2950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9KES8_PARCT1.590e-4232.63Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8H7NTQ9_9APHY1.070e-4133.23Integrase catalytic domain-containing protein n=1 ... [more]
A0A6S7JEY7_PARCT8.240e-4131.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q9C7Y1_ARATH1.940e-3935.24Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
UPI0006A737CF2.140e-3933.95uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A0A9YPH4_LYGHE3.060e-3931.90Copia protein n=1 Tax=Lygus hesperus TaxID=30085 R... [more]
A0A2G8RWY5_9APHY5.020e-3934.90Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A4Y9ZJA2_9AGAM2.200e-3832.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6D2JBX5_9BRAS2.280e-3832.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0009AB427F3.090e-3833.33uncharacterized protein LOC109950541 n=1 Tax=Prunu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14969contigH-paniculata_contig14969:3782..5263 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score125.9
Seed ortholog evalue2.1e-26
Seed eggNOG ortholog15368.BRADI1G43550.1
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3IKX9@38820,3M2IR@4447,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons2
Model size1283
Cds size615
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14969.2950.1prot_H-paniculata_contig14969.2950.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14969 4037..4850 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929196.3642874-UTR-H-paniculata_contig14969:3781..40361622929196.3642874-UTR-H-paniculata_contig14969:3781..4036Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14969 3782..4036 -
1691480766.3082664-UTR-H-paniculata_contig14969:3781..40361691480766.3082664-UTR-H-paniculata_contig14969:3781..4036Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14969 3782..4036 -
1622929196.416646-UTR-H-paniculata_contig14969:4850..52631622929196.416646-UTR-H-paniculata_contig14969:4850..5263Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14969 4851..5263 -
1691480766.3427432-UTR-H-paniculata_contig14969:4850..52631691480766.3427432-UTR-H-paniculata_contig14969:4850..5263Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14969 4851..5263 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929196.3829594-CDS-H-paniculata_contig14969:4036..43921622929196.3829594-CDS-H-paniculata_contig14969:4036..4392Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14969 4037..4392 -
1691480766.319929-CDS-H-paniculata_contig14969:4036..43921691480766.319929-CDS-H-paniculata_contig14969:4036..4392Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14969 4037..4392 -
1622929196.398885-CDS-H-paniculata_contig14969:4591..48501622929196.398885-CDS-H-paniculata_contig14969:4591..4850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14969 4592..4850 -
1691480766.3290536-CDS-H-paniculata_contig14969:4591..48501691480766.3290536-CDS-H-paniculata_contig14969:4591..4850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14969 4592..4850 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14969.2950.1

>prot_H-paniculata_contig14969.2950.1 ID=prot_H-paniculata_contig14969.2950.1|Name=mRNA_H-paniculata_contig14969.2950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MLVLYRDDGGEADLLVAVYVDDLVITGRREKVDNFKHNINQRFRMKDLGS
LSRVLGIKVRRDRPNGTITISQGSYIREVLKCTVLTRTRPDIAYAIHQAA
RRMEDPCREDFCTCKRIYCYLSTVSDLGITFSGTSNGHGLEGFVDPDWVE
NVDDRKSVTGYVFNLNGSAISSCSRKQQLVTWSSTEAEYVAAGEAGKETV
YLRD*
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mRNA from alignment at H-paniculata_contig14969:3782..5263-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14969.2950.1 ID=mRNA_H-paniculata_contig14969.2950.1|Name=mRNA_H-paniculata_contig14969.2950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1482bp|location=Sequence derived from alignment at H-paniculata_contig14969:3782..5263- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTCGTACGAAATGGATTTTAAGCGGAAAACTGAAGGAGGACAGCAGCGT GGCACGCTACAAAGCGCGACTGGTGGCTCAAGGCTTTTCACAGGTGGGGG GTGAAGATTTCTTTGAAACCAGTGCACCCGTAGCTCGCATGTCAACGTTA CGTACTGTTTTTAGCCTGGCCGCCGAACAAAATTTCGAATTAGAAGGCAT GGACGCAGATGTGGCGTATTTGAACGCCCTGATAGAAGAAGAACTGTTTG TCAAGCTACCCCCCCCCCATTTTTCACCTTCCTCCCGAAAAATGCCGTTT GTATGTCGCCTGCGTAAAAGCCTGTATGGCCTCAAGCAGAGCAGCCGTAA CTAGAATAACACCGTTGAAGATTTCCTTGTTGGGATAGGATTCGACCGTT CTACTACCGACTCATGCTTGTACTTTATCGCGACGATGGGGGAGAGGCAG ACCTTCTGGTGGCCGTCTACGTTGACGACCTGGTCATTACTGGCCGTCGT GAGAAAGTAGACAATTTCAAGCATAACATAAATCAGCGTTTTAGGATGAA AGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAAAAGTACGACGTGACC GCCCCAATGGTACCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTA CTAAAATGTACGGTTTTGACGAGTATCGAGGGATACCCAGCCCTGTAGAG AGAAAAGTGAAGCTTTCAGCACCCGAGTAGGCCGACAAGCCCCCCGAACC GAAGTCACTTGGGGCTGTACTATCGGACATAGGCGCAGGAGTACAAGAAA GCAGCAGAGGGAGAAGTGACAATTCAACTGAATAAGAGGTATGGCAGGAT CATTCATATACGCCTCGACAGGAACTAGACCCGATATAGCATACGCGATA CACCAAGCAGCACGTCGTATGGAGGACCCATGTCGGGAAGACTTCTGTAC ATGCAAGCGCATTTATTGTTATCTCAGCACTGTGTCTGACCTCGGCATTA CGTTCAGTGGTACGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATCCC GATTGGGTGGAAAATGTCGACGACCGAAAGTCCGTAACAGGATACGTTTT CAACCTGAACGGTAGTGCGATAAGTTCGTGCTCTAGGAAGCAACAGTTAG TCACGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGCAGGAGAAGCGGGA AAAGAGACGGTATATCTTAGGGATTGATTTACTACGATCAATAGGTTTCG GATGCAGGGGGACCACGACATAGTTTGGGGACACTACATCCGCTACTATC TCAGTAAGGGATCTGGCGCACACTGCAGGACAAAGTACATCGGAGTGCGC TGGCACCGAAATCGAGAGTGGGTTCGGGAAGGAATATTGACGTTGGAATA CGTGCAGACCGGCGACCGACTCGCTGGCGTTTTAACGAAAGGACTGAACA GAGTACAGTTTCAGAGACTTAGAAATTTACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig14969:3782..5263-

>mRNA_H-paniculata_contig14969.2950.1 ID=mRNA_H-paniculata_contig14969.2950.1|Name=mRNA_H-paniculata_contig14969.2950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig14969:3782..5263- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTGTACTTTATCGCGACGATGGGGGAGAGGCAGACCTTCTGGTGGC
CGTCTACGTTGACGACCTGGTCATTACTGGCCGTCGTGAGAAAGTAGACA
ATTTCAAGCATAACATAAATCAGCGTTTTAGGATGAAAGACTTGGGCTCT
CTCTCGCGCGTGTTGGGAATAAAAGTACGACGTGACCGCCCCAATGGTAC
CATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACTAAAATGTACGG
TTTTGACGAATGCTTGTACTTTATCGCGACGATGGGGGAGAGGCAGACCT
TCTGGTGGCCGTCTACGTTGACGACCTGGTCATTACTGGCCGTCGTGAGA
AAGTAGACAATTTCAAGCATAACATAAATCAGCGTTTTAGGATGAAAGAC
TTGGGCTCTCTCTCGCGCGTGTTGGGAATAAAAGTACGACGTGACCGCCC
CAATGGTACCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACTAA
AATGTACGGTTTTGACGAGAACTAGACCCGATATAGCATACGCGATACAC
CAAGCAGCACGTCGTATGGAGGACCCATGTCGGGAAGACTTCTGTACATG
CAAGCGCATTTATTGTTATCTCAGCACTGTGTCTGACCTCGGCATTACGT
TCAGTGGTACGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATCCCGAT
TGGGTGGAAAATGTCGACGACCGAAAGTCCGTAACAGGATACGTTTTCAA
CCTGAACGGTAGTGCGATAAGTTCGTGCTCTAGGAAGCAACAGTTAGTCA
CGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGCAGGAGAAGCGGGAAAA
GAGACGGTATATCTTAGGGATTGAGAACTAGACCCGATATAGCATACGCG
ATACACCAAGCAGCACGTCGTATGGAGGACCCATGTCGGGAAGACTTCTG
TACATGCAAGCGCATTTATTGTTATCTCAGCACTGTGTCTGACCTCGGCA
TTACGTTCAGTGGTACGAGTAATGGTCACGGTCTGGAAGGATTCGTTGAT
CCCGATTGGGTGGAAAATGTCGACGACCGAAAGTCCGTAACAGGATACGT
TTTCAACCTGAACGGTAGTGCGATAAGTTCGTGCTCTAGGAAGCAACAGT
TAGTCACGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGCAGGAGAAGCG
GGAAAAGAGACGGTATATCTTAGGGATTGA
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