Gvermi3698.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi3698.t1
Unique NameGvermi3698.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length309
Homology
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A2V3IY60_9FLOR (Cyclin-L1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY60_9FLOR)

HSP 1 Score: 369 bits (947), Expect = 3.280e-125
Identity = 191/330 (57.88%), Postives = 228/330 (69.09%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGYDWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLPDGWENVLGSSTDECERLVLYFQNLYKRPVEMSCYRNHSKSAVLEKFSTKQ---------------TG--------DHQSGEASGQNCRKNKRPFDREEKRNDSSKGSPEARSTGEASEIQENGDRDQSGEKHSNGLSKPGRLQRKRRRFEDAV 307
            MLLHRFYTQVSI+AH+TIWAAGACI++S KLADE R LRHV NV+YDR++ RQN+ V+TV++ GR CRRP  +YGAEGY WK A I TERH+LKELGFR+ +ELPHNF+L+FVNTLRDKAGAPGWSE +G F  LLQ AWDYANDLLIDQ+CVREAPEALAC+CISLAT HCEGSLPDGWE VLGSS +ECERL LY + LYKR   +SCY+N+S++ VLEKFS ++               TG         H+S + S + C       D    ++D + G  +  S                     NG  KP R +RKRRRFEDA 
Sbjct:    1 MLLHRFYTQVSIVAHSTIWAAGACILLSTKLADETRSLRHVVNVVYDRVIHRQNMPVETVAVGGRNCRRPIEYYGAEGYHWKFAFIATERHILKELGFRLAMELPHNFILIFVNTLRDKAGAPGWSECEGDFKALLQTAWDYANDLLIDQLCVREAPEALACSCISLATEHCEGSLPDGWETVLGSSKEECERLALYIRALYKRSAWISCYKNYSRAQVLEKFSLRELPHDQVQRSHIYEDDTGKRLRSVEESHESVQVSKKLCENENSTVDDATSKSDKNVGELDNPSV-------------------ENGALKPVRRKRKRRRFEDAA 311          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A8C2UZA5_CHILA (Cyclin-L1 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2UZA5_CHILA)

HSP 1 Score: 97.1 bits (240), Expect = 7.780e-19
Identity = 66/207 (31.88%), Postives = 99/207 (47.83%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGY-DWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLPDG--WENVLGSSTDECERLVLYFQNLYKR 204
            +L HRF+   S + H+    A ACI ++ K+ + PR +R V N  +               + G+  R P      + Y + K  +I  ER VLKELGF V V+ PH  ++V++  L  +              TL+Q AW+Y ND L   +CVR  PE +ACACI LA    +  LP    W  + G++ +E + + +    LY R
Sbjct:  110 VLFHRFFYSQSFVKHSFEIVAMACITLAFKIEEAPRRIRDVINAFH-----------HLHQLRGK--RTPSPLILDQNYTNTKRQVIRAERRVLKELGFCVHVKHPHKIIVVYLQVLECERN-----------QTLVQTAWNYMNDSLRTNVCVRFQPETVACACIYLAARALQIPLPTRPHWFLLFGATEEEIQEICMETLRLYTR 292          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A2P6NUB4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUB4_9EUKA)

HSP 1 Score: 88.6 bits (218), Expect = 2.960e-16
Identity = 68/208 (32.69%), Postives = 101/208 (48.56%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGYDWKLA--LIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLPDG---WENVLGSSTDECERLVLYFQNLYK 203
            +LL RFY + S+  H +  AA + + ++ K+A+ PR  R + NV + RL+ R     +     G +    F   G + Y WKL    I TER +LKELGF V V LP+ +++ F+  L     AP           + Q  W+Y ND L    CV   PE +A ACI +A       LP+    W  +  +S D+  ++  + Q LYK
Sbjct:   59 VLLQRFYYRSSLARHCSKSAAISSLFLACKVAETPRKTRDLLNVFH-RLLCRSQEKREEEKKGGEI---TFLEVGGQEY-WKLKNDCINTERFMLKELGFIVYVVLPYKYIIFFIKLL----DAPP---------EVRQRTWNYVNDSLRTPACVVFGPEVVAAACIYMAARDLSVPLPESPSPWYLLFETSLDQITQVCWHIQQLYK 248          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A8E0RWA3_9TREM (Cyclin-L2 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RWA3_9TREM)

HSP 1 Score: 88.6 bits (218), Expect = 4.240e-16
Identity = 65/208 (31.25%), Postives = 93/208 (44.71%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGY-DWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLP--DGWENVLGSSTDECERLVLYFQNLYKRP 205
            +L  RF+   S + H     A AC+ ++AKL + PR +R + NV +     R+              + P      + Y + K  +I+ ER VLKELGF V  + PH  V+ ++  L           GQ S    +Q AW+Y ND L   + VR  PEA+ACACI LA+      LP    W  +     +    + L    LY RP
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACVFLAAKLEECPRRIRDIINVFHHMRQVREK-------------KTPTPVMLDQSYTNLKNQIIKAERRVLKELGFCVHAKHPHKLVICYLQAL-----------GQESNAKFVQTAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWELFTVDEESVREIALCLVRLYARP 264          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A7S4DZZ4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DZZ4_9EUKA)

HSP 1 Score: 86.7 bits (213), Expect = 2.360e-15
Identity = 60/206 (29.13%), Postives = 101/206 (49.03%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGYDWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLPDG--WENVLGSSTDECERLVLYFQNLYKR 204
            +L HRF+ + S+I +  +  A   + ++ K+ +  R  R + NV +DRL+ R+    + +S+  R  +R +N        W+  + + E  +LKELG+ V V+ PH F+L +V T+         S+       L Q AW+Y ND +   +C+R  PE++A A I L        LP    W ++ G++  E E +      LY R
Sbjct:   56 ILFHRFFYRKSMIDYEVLQVAMTSVFLATKVEESQRQTRDILNV-FDRLLKRRYY--RELSVFDRTSKR-YN-------KWEQKIRKVELVMLKELGYTVYVDHPHRFILFYVRTIYGNQDLTDTSK------QLAQRAWNYLNDAMRTDVCLRYRPESIATAAIYLTARVLSIRLPSSPPWYHLFGATKMELEEISSIIAELYTR 244          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A504YTN1_FASGI (Cyclin-L2 n=3 Tax=Fasciola TaxID=6191 RepID=A0A504YTN1_FASGI)

HSP 1 Score: 86.7 bits (213), Expect = 3.090e-15
Identity = 73/253 (28.85%), Postives = 108/253 (42.69%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGY-DWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLP--DGWENVLGSSTDECERLVLYFQNLYKRP--------VEMSCYRNHSKSAV-----LEKFSTKQTGDHQSGEAS 237
            +L  RF+   S + H     A AC+ ++AKL + PR +R + NV +     R+              + P      + Y + K  +I+ ER VLKELGF V  + PH   + + + +         + GQ S    +Q AW+Y ND L   + VR  PEA+ACACI LA+      LP    W  +     +    + L    LY RP         E++  R     A      L+K  +  T DH S  +S
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACVFLAAKLEECPRRIRDIINVFHHMRQIREK-------------KTPTPVLLDQSYTNLKNQIIKAERRVLKELGFCVHAKHPHKVSVAYTHFILQLVICYLQALGQESNAKFVQTAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWEMFTVDEESVREIALCLVRLYARPKADIAELETELAKLRKSQVEAKEREIELKKVQSSVTPDHTSDHSS 320          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A3R7GFH5_CLOSI (Cyclin-L2 n=4 Tax=Opisthorchiidae TaxID=6196 RepID=A0A3R7GFH5_CLOSI)

HSP 1 Score: 85.9 bits (211), Expect = 5.590e-15
Identity = 64/209 (30.62%), Postives = 93/209 (44.50%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYD-RLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGY-DWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLP--DGWENVLGSSTDECERLVLYFQNLYKRP 205
            +L  RF+   S + H     A ACI ++AKL + PR +R V NV +  R +  Q +              P      + Y + K  +I+ ER +LKELGF V  + PH  ++ ++  L  +  A             +Q AW+Y ND L   + VR  PEA+ACACI LA+      LP    W  +     +    + L    LY RP
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACIFLAAKLEECPRRIRDVINVFHHIRQIREQRI--------------PTPVMLDQSYSNLKNQVIKAERRLLKELGFCVHAKHPHKLIICYLQALEQEKNAK-----------FVQCAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWEMFAVDEESVREISLCLVRLYARP 264          
BLAST of Gvermi3698.t1 vs. uniprot
Match: H2KP81_CLOSI (Cyclin-L2 n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=H2KP81_CLOSI)

HSP 1 Score: 85.9 bits (211), Expect = 5.600e-15
Identity = 64/209 (30.62%), Postives = 93/209 (44.50%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYD-RLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGY-DWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLP--DGWENVLGSSTDECERLVLYFQNLYKRP 205
            +L  RF+   S + H     A ACI ++AKL + PR +R V NV +  R +  Q +              P      + Y + K  +I+ ER +LKELGF V  + PH  ++ ++  L  +  A             +Q AW+Y ND L   + VR  PEA+ACACI LA+      LP    W  +     +    + L    LY RP
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACIFLAAKLEECPRRIRDVINVFHHIRQIREQRI--------------PTPVMLDQSYSNLKNQVIKAERRLLKELGFCVHAKHPHKLIICYLQALEQEKNAK-----------FVQCAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWEMFAVDEESVREISLCLVRLYARP 264          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A7S2TYB6_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYB6_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 8.290e-15
Identity = 58/206 (28.16%), Postives = 101/206 (49.03%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGYDWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLPDG--WENVLGSSTDECERLVLYFQNLYKR 204
            +L HRF+ + S+I +  +  A   + ++ K+ +  R  R + NV +DRL+ R+    + +S+  R  +R +N        W+  + + E  +LKE+G+ V V+ PH F+L +V T+         S+       L Q AW++ ND +   +C+R  PE++A A I L        LP    W ++ G++  E E +      LY R
Sbjct:   56 ILFHRFFYRKSMIDYEVLQVAMTSVFLATKIEESQRQTRDILNV-FDRLLKRRYY--RELSVFDRTSKR-YN-------KWEAKMRKVELVMLKEMGYTVYVDHPHRFILFYVRTIYGNQDLTDASK------QLAQRAWNFLNDAMRTDVCLRYRPESIATAAIYLTARVLSIRLPSNPPWYHLFGATRMELEEISSIISELYTR 244          
BLAST of Gvermi3698.t1 vs. uniprot
Match: A0A5N5T5C7_9CRUS (Cyclin-L2 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T5C7_9CRUS)

HSP 1 Score: 80.9 bits (198), Expect = 5.490e-14
Identity = 66/240 (27.50%), Postives = 108/240 (45.00%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLVDRQNVCVQTVSMAGRLCRRPFNFYGAEGYDWKLALIETERHVLKELGFRVTVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQICVREAPEALACACISLATTHCEGSLPDG--WENVLGSSTDECERLVLYFQNLYKRPVEMSCYRN--HSKSAVLEKFSTKQTGDHQSGEA 236
            +L  RFY   S +       A ACI ++ K+      +RHV NV ++ +   +N  V    +  R      N+        K  +I  E  +LKELGF   V+LPH   ++++  L                  L+Q+ W++ ND L   +CVR +PE +AC+CI LA    +  LP+   W +V G +  + E++      LY R    +  +   H + AVL + +  +  D ++G A
Sbjct:    6 VLFQRFYYSKSFVRCPVEITAMACITLAWKMEVGQMEIRHVINV-FNHMKQFRNGEVFDPVILDR------NYVAL-----KNQVIRAETRLLKELGFCCHVKLPHKISIMYLRFLLADDNKK-----------LVQSTWNFMNDSLRTDVCVRYSPETIACSCIWLAGRQLKIPLPENPPWYHVFGVNLSDIEKIAASIMKLYTRKKRAALPQRAIHRQKAVLHQSAMPRHQDEENGHA 222          
The following BLAST results are available for this feature:
BLAST of Gvermi3698.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A2V3IY60_9FLOR3.280e-12557.88Cyclin-L1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A8C2UZA5_CHILA7.780e-1931.88Cyclin-L1 n=1 Tax=Chinchilla lanigera TaxID=34839 ... [more]
A0A2P6NUB4_9EUKA2.960e-1632.69Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A8E0RWA3_9TREM4.240e-1631.25Cyclin-L2 n=1 Tax=Fasciolopsis buski TaxID=27845 R... [more]
A0A7S4DZZ4_9EUKA2.360e-1529.13Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A504YTN1_FASGI3.090e-1528.85Cyclin-L2 n=3 Tax=Fasciola TaxID=6191 RepID=A0A504... [more]
A0A3R7GFH5_CLOSI5.590e-1530.62Cyclin-L2 n=4 Tax=Opisthorchiidae TaxID=6196 RepID... [more]
H2KP81_CLOSI5.600e-1530.62Cyclin-L2 n=1 Tax=Clonorchis sinensis TaxID=79923 ... [more]
A0A7S2TYB6_9EUKA8.290e-1528.16Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A5N5T5C7_9CRUS5.490e-1427.50Cyclin-L2 n=1 Tax=Armadillidium nasatum TaxID=9680... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 102..208
e-value: 2.6E-13
score: 52.0
NoneNo IPR availableGENE3D1.10.472.10coord: 1..100
e-value: 2.4E-12
score: 48.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..308
NoneNo IPR availablePANTHERPTHR10026:SF13LD24704Pcoord: 2..268
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..308
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..24
score: 5.0
IPR043198Cyclin/Cyclin-like subunit Ssn8PANTHERPTHR10026CYCLINcoord: 2..268
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 103..204
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:4034073..4034999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3698.t1Gvermi3698.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_41 4034073..4034999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi3698.t1 ID=Gvermi3698.t1|Name=Gvermi3698.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=309bp
MLLHRFYTQVSIIAHNTIWAAGACIIVSAKLADEPRPLRHVSNVIYDRLV
DRQNVCVQTVSMAGRLCRRPFNFYGAEGYDWKLALIETERHVLKELGFRV
TVELPHNFVLVFVNTLRDKAGAPGWSEGQGSFHTLLQAAWDYANDLLIDQ
ICVREAPEALACACISLATTHCEGSLPDGWENVLGSSTDECERLVLYFQN
LYKRPVEMSCYRNHSKSAVLEKFSTKQTGDHQSGEASGQNCRKNKRPFDR
EEKRNDSSKGSPEARSTGEASEIQENGDRDQSGEKHSNGLSKPGRLQRKR
RRFEDAVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043198Cyclin/Ssn8
IPR036915Cyclin-like_sf