Gvermi8724.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8724.t1
Unique NameGvermi8724.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length110
Homology
BLAST of Gvermi8724.t1 vs. uniprot
Match: UPI000415237F (deoxyribose-phosphate aldolase n=1 Tax=Clostridium sp. Ade.TY TaxID=1391647 RepID=UPI000415237F)

HSP 1 Score: 96.7 bits (239), Expect = 1.510e-22
Identity = 53/101 (52.48%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGSEA 102
            LL DEEK   CK+S   GADFVKTSTGFSTGGAT +DIKLM   V              K++ VKASGG+++ E+A+ M+ NGATRIG S +   C G E+
Sbjct:  133 LLTDEEKVIACKLSKEAGADFVKTSTGFSTGGATGEDIKLMRETVG-------------KEMGVKASGGVRSLEDALVMIENGATRIGASASIEICEGRES 220          
BLAST of Gvermi8724.t1 vs. uniprot
Match: A0A1S6IRW5_9LACT (Deoxyribose-phosphate aldolase n=2 Tax=Jeotgalibaca dankookensis TaxID=708126 RepID=A0A1S6IRW5_9LACT)

HSP 1 Score: 95.9 bits (237), Expect = 2.410e-22
Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCS 98
            LL D+EK   C++S   GAD+VKTSTGFST GAT +D+KLM              EA  K++ VKASGGI  AEEA EM++NGATR+GTSR+   CS
Sbjct:  130 LLTDDEKKMACQLSKKAGADYVKTSTGFSTDGATPEDVKLMR-------------EAVGKEMGVKASGGIHDAEEAREMIKNGATRLGTSRSVEICS 213          
BLAST of Gvermi8724.t1 vs. uniprot
Match: A0A343JC09_9CLOT (Deoxyribose-phosphate aldolase n=1 Tax=Clostridium isatidis TaxID=182773 RepID=A0A343JC09_9CLOT)

HSP 1 Score: 95.1 bits (235), Expect = 5.940e-22
Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGSEA 102
            LL DEEKA  CK++   GADFVKTSTGFSTGGAT +DIKLM   V               ++ VKASGG++T E+A+ M+ NGATRIG S     C G+++
Sbjct:  133 LLTDEEKATACKLAKEAGADFVKTSTGFSTGGATKEDIKLMRETVGP-------------ELGVKASGGVRTREDALVMIENGATRIGASSGIAICEGTKS 220          
BLAST of Gvermi8724.t1 vs. uniprot
Match: A0A1H7G3Q3_9LACT (Deoxyribose-phosphate aldolase n=3 Tax=Alkalibacterium TaxID=99906 RepID=A0A1H7G3Q3_9LACT)

HSP 1 Score: 94.4 bits (233), Expect = 1.130e-21
Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGSEAQKS 105
            LL D EK   C+IS   GADFVKTSTGFSTGGAT++DI+LM   V              K++ VKASGG++T E+A  M+  GATRIGTS       G+EA +S
Sbjct:  131 LLTDNEKVRACEISKRAGADFVKTSTGFSTGGATVEDIRLMRKTVG-------------KEMGVKASGGVRTIEDAKAMIEAGATRIGTSNGIALVEGNEATES 221          
BLAST of Gvermi8724.t1 vs. uniprot
Match: A0A8B0GNC1_9LACT (Deoxyribose-phosphate aldolase n=1 Tax=Carnobacteriaceae bacterium zg-C25 TaxID=2821731 RepID=A0A8B0GNC1_9LACT)

HSP 1 Score: 93.6 bits (231), Expect = 2.250e-21
Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGSEAQ 103
            LL DEEK  VC+I   VGADFVKTSTGFSTGGA+I+D++LM   V              +Q+ VKASGG+++ E+A+ M+  GATR+G S     C G  +Q
Sbjct:  131 LLTDEEKVKVCQICKTVGADFVKTSTGFSTGGASIEDVRLMRQTVG-------------EQMGVKASGGVRSKEDALAMIEAGATRLGASSGVQICQGEVSQ 219          
BLAST of Gvermi8724.t1 vs. uniprot
Match: A0A2V2DYK4_9FIRM (Deoxyribose-phosphate aldolase n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A2V2DYK4_9FIRM)

HSP 1 Score: 92.4 bits (228), Expect = 9.180e-21
Identity = 51/102 (50.00%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGSEAQ 103
            LL +EEK   C++S   GADFVKTSTGFSTGGAT++D++LM   V                + VKASGG++T E+AV M++ GATRIGTS AA   +G  A+
Sbjct:  128 LLTNEEKIKACELSKQAGADFVKTSTGFSTGGATLEDVRLMRQTVGP-------------NMGVKASGGVRTYEDAVAMIKAGATRIGTSNAAAIVTGKAAE 216          
BLAST of Gvermi8724.t1 vs. uniprot
Match: UPI00048485C8 (deoxyribose-phosphate aldolase n=1 Tax=Brachyspira alvinipulli TaxID=84379 RepID=UPI00048485C8)

HSP 1 Score: 91.7 bits (226), Expect = 1.120e-20
Identity = 51/90 (56.67%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTS 91
            LL DEEK   CKI+   GA+FVKTSTGF  GGAT  DIKLMHG V              K+V++KASGGIKT E+A++M+  GA+RIGTS
Sbjct:  130 LLTDEEKVLACKIAKECGANFVKTSTGFFNGGATEHDIKLMHGAVG-------------KEVKIKASGGIKTYEDALKMIDAGASRIGTS 206          
BLAST of Gvermi8724.t1 vs. uniprot
Match: UPI00195DDFC0 (deoxyribose-phosphate aldolase n=2 Tax=Clostridium TaxID=1485 RepID=UPI00195DDFC0)

HSP 1 Score: 91.3 bits (225), Expect = 1.830e-20
Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSG 99
            LL DEEK   CK++   GADFVKTSTGFSTGGAT +DIKLM   V               ++ VKASGG+++ E+A  M+ NGATRIG S +   C G
Sbjct:  133 LLTDEEKVIACKLAKEAGADFVKTSTGFSTGGATKEDIKLMRETVGP-------------ELGVKASGGVRSLEDAESMIENGATRIGASASIEICEG 217          
BLAST of Gvermi8724.t1 vs. uniprot
Match: A0A1L8PBS3_9LACT (Deoxyribose-phosphate aldolase n=1 Tax=Alkalibacterium sp. 20 TaxID=1798803 RepID=A0A1L8PBS3_9LACT)

HSP 1 Score: 90.9 bits (224), Expect = 2.470e-20
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGSEA 102
            LLN+ EK   C+ +   GADFVKTSTGFSTGGAT++D+KLM   V              K++ VKASGG+++ E+A+ M+  GATRIGTS       G+EA
Sbjct:  131 LLNEHEKVRACESAKRAGADFVKTSTGFSTGGATLEDVKLMRKTVG-------------KKMGVKASGGVRSIEDAIAMIEAGATRIGTSNGVAIVEGNEA 218          
BLAST of Gvermi8724.t1 vs. uniprot
Match: A0A6N3EKM6_9CLOT (Deoxyribose-phosphate aldolase n=11 Tax=root TaxID=1 RepID=A0A6N3EKM6_9CLOT)

HSP 1 Score: 90.9 bits (224), Expect = 2.570e-20
Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    2 LLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLTEVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGSEA 102
            LL DEEK   CK+S   GADFVKTSTGFSTGGAT  DIKLM   V              +++ VKASGG+++ E+A  M+ NGA+RIG S +   C G+++
Sbjct:  133 LLTDEEKVTACKLSKEAGADFVKTSTGFSTGGATAKDIKLMRETVG-------------EELGVKASGGVRSLEDAELMIENGASRIGASASIAICEGTKS 220          
The following BLAST results are available for this feature:
BLAST of Gvermi8724.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000415237F1.510e-2252.48deoxyribose-phosphate aldolase n=1 Tax=Clostridium... [more]
A0A1S6IRW5_9LACT2.410e-2254.64Deoxyribose-phosphate aldolase n=2 Tax=Jeotgalibac... [more]
A0A343JC09_9CLOT5.940e-2251.49Deoxyribose-phosphate aldolase n=1 Tax=Clostridium... [more]
A0A1H7G3Q3_9LACT1.130e-2150.96Deoxyribose-phosphate aldolase n=3 Tax=Alkalibacte... [more]
A0A8B0GNC1_9LACT2.250e-2149.02Deoxyribose-phosphate aldolase n=1 Tax=Carnobacter... [more]
A0A2V2DYK4_9FIRM9.180e-2150.00Deoxyribose-phosphate aldolase n=1 Tax=Clostridial... [more]
UPI00048485C81.120e-2056.67deoxyribose-phosphate aldolase n=1 Tax=Brachyspira... [more]
UPI00195DDFC01.830e-2051.02deoxyribose-phosphate aldolase n=2 Tax=Clostridium... [more]
A0A1L8PBS3_9LACT2.470e-2048.51Deoxyribose-phosphate aldolase n=1 Tax=Alkalibacte... [more]
A0A6N3EKM6_9CLOT2.570e-2049.50Deoxyribose-phosphate aldolase n=11 Tax=root TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002915DeoC/FbaB/LacD aldolasePFAMPF01791DeoCcoord: 12..86
e-value: 9.1E-6
score: 25.4
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..108
e-value: 1.1E-28
score: 102.0
IPR028581Deoxyribose-phosphate aldolase type IPANTHERPTHR10889:SF1ALDOLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G06590)-RELATEDcoord: 2..103
IPR011343Deoxyribose-phosphate aldolasePANTHERPTHR10889DEOXYRIBOSE-PHOSPHATE ALDOLASEcoord: 2..103
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 2..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3737contigScGOVlb_3737:2..330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8724.t1Gvermi8724.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3737 2..330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8724.t1 ID=Gvermi8724.t1|Name=Gvermi8724.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=110bp
XLLNDEEKAAVCKISALVGADFVKTSTGFSTGGATIDDIKLMHGNVRTLT
EVVPIDEANIKQVQVKASGGIKTAEEAVEMLRNGATRIGTSRAANWCSGS
EAQKSDPAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002915DeoC/FbaB/LacD_aldolase
IPR013785Aldolase_TIM
IPR028581DeoC_typeI
IPR011343DeoC