Gvermi12246.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12246.t1
Unique NameGvermi12246.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length648
Homology
BLAST of Gvermi12246.t1 vs. uniprot
Match: A0A2V3J037_9FLOR (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J037_9FLOR)

HSP 1 Score: 989 bits (2558), Expect = 0.000e+0
Identity = 471/640 (73.59%), Postives = 556/640 (86.88%), Query Frame = 0
Query:    6 AFTSAGFYGSSDNWQSSKLPRARQLCHQRVRTTTTAVLQQQNL--QSRKLFAPGEPGHRFHNFSPEDIEAIRIRHCRLESEELCDHVWKEVTRGKASLDDMATSLSTCSASRETGGDLGWWWRDEVVPENIDEFGINDQLLAAALRSRPNRVERVETKNGWHVFVVEEVRHVLRTKHERTPSRNNPNRKKETN-RDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRK 642
            AF +  F    + +   +   +RQ   +  R +  AV+QQ+    +  ++  PG PGHRFHN SP+DIEAIRIRHCRLE++ELCD VWK++TR KA L D+A SLSTC+AS+  GGDLGWWW++E+VPEN++EFGINDQLLAAALRSRP+ +ERV+TK+GWHVF+VEE RHVLRTKHERT SR NPNRK+      ++VP P+P TYA+QTLGCQMNRSDSERMAGEL RLGY ETSDPFQASLL+LNTCNIREHAESKVYSY+GRHV+RKR YP DVTLCVAGCVAQQEGE+MLRRIPELDLVFGPQY NR+GDLL+DVERN CQ+AATDP H+QEDISKPKRES+V+AWINV++GCGENC+FCTVGNVVRSVEQSR+M +IR+EI  AA+DG RE+VLLGQNIDAYGRDMYPK+TFS+LL +IHD++GIERIRFTTSHPRYIS NLV++CA LP++MP+FHIPPQSGDN +LKAMRRGYTVE YE +V RIR+ IPDA ICGDMIVGFPGETE+QFQ+SL+LM R+KFD MNTAAYSPRPQTPAA M+NQ+PDAVK+DRL+RMN +VKAHALERS RY+GRTE VLVE +NPK+A QV+GR P NR VYF+GSIE+L+GKIV ++IE AYPFSLKGR+
Sbjct:    6 AFVAGSFCTPLETFLPQRNLCSRQTFSESGRKSIVAVIQQERTPRELNRVPRPGVPGHRFHNISPDDIEAIRIRHCRLETKELCDQVWKQITRDKARLADVAASLSTCNASKHQGGDLGWWWKEEIVPENVEEFGINDQLLAAALRSRPHTLERVQTKHGWHVFIVEEARHVLRTKHERTASRQNPNRKRGVGVNGEQVPRPLPHTYAVQTLGCQMNRSDSERMAGELNRLGYTETSDPFQASLLILNTCNIREHAESKVYSYVGRHVMRKRMYPNDVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYVNRLGDLLTDVERNGCQVAATDPTHIQEDISKPKRESSVSAWINVIYGCGENCSFCTVGNVVRSVEQSRSMESIRSEIEEAARDGYREIVLLGQNIDAYGRDMYPKRTFSQLLDFIHDIDGIERIRFTTSHPRYISQNLVDMCATLPRVMPFFHIPPQSGDNDVLKAMRRGYTVEAYEAVVKRIRKSIPDAAICGDMIVGFPGETEEQFQKSLELMDRVKFDVMNTAAYSPRPQTPAALMENQVPDAVKMDRLYRMNEVVKAHALERSLRYIGRTELVLVEHQNPKNARQVVGRTPTNRSVYFDGSIEELRGKIVSVEIEDAYPFSLKGRR 645          
BLAST of Gvermi12246.t1 vs. uniprot
Match: R7QB29_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB29_CHOCR)

HSP 1 Score: 879 bits (2271), Expect = 1.890e-315
Identity = 427/613 (69.66%), Postives = 505/613 (82.38%), Query Frame = 0
Query:   39 TTAVLQQQNLQSRKLFAP----GEPGHRFHNFSPEDIEAIRIRHCRLESEELCDHVWKEVTRGKASLDDMATSLSTCSASRETGGDLGWWWRDEVVPENIDEFGINDQLLAAALRSRPNRVERVETKNGWHVFVVEEVRHVLRTKHERTPSRNNPNRKKETNRDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRKVGPAY 647
            T AVLQ+++  S +   P    G PG+RF++ SP DIEA+RIRHCR+++EEL   V++++   + SL  MA  +STCSAS+E+GGDLGWWW+DE +P + ++FG+N+QLL AALR+RPNR+E+V+T++GWHVF+VEEVRHV+RTKHERTPSR   ++K   N   E  VP+  TYA+QTLGCQMNRSDSERMAGEL R+GY E  DPF+AS+LVLNTCNIR+HAE KVYSY+GRH  RKRKYP DVTL VAGCVAQQEGERMLRRIPELDLVFGPQYANR+GDLL DVE N+CQ+AATDPIH+QEDISKPKRESTVTAW+NVM+GCGENCTFCTVGNVVRSVEQSRT+++IRAE+   A+ GIREVVLLGQNIDAYGRDMYPKKTF+ELL  +HDV+GI+RIRFTTSHPRYIS NLV  CA LP +MPYFHIPPQSG++ +LK M+RGYTV+ ++ +VNRIRE  PDA ICGDMIVGFPGETE+QFQ SL LM  +KFD MNTAAYSPRP TPAA   NQI DA+K DRL RMN LV  HALERS RYVGR E+VLVE+E+ K   +V+GR P NR V F GS E L+GKIVP+KI  A PF+L G   G  Y
Sbjct:   45 TRAVLQREDTISPRADIPKIASGLPGNRFYDISPNDIEAVRIRHCRVDTEELAKVVFRKIVAREESLAKMAKMVSTCSASKESGGDLGWWWQDEAIPADREQFGVNEQLLGAALRTRPNRLEQVKTEDGWHVFMVEEVRHVIRTKHERTPSRRKADKKDFKNTSAEALVPVAKTYAMQTLGCQMNRSDSERMAGELARIGYKEIDDPFKASVLVLNTCNIRDHAEKKVYSYIGRHAARKRKYPQDVTLAVAGCVAQQEGERMLRRIPELDLVFGPQYANRLGDLLKDVETNQCQVAATDPIHIQEDISKPKRESTVTAWVNVMYGCGENCTFCTVGNVVRSVEQSRTISSIRAEMEDIARSGIREVVLLGQNIDAYGRDMYPKKTFAELLRNVHDVDGIDRIRFTTSHPRYISRNLVTTCAELPNVMPYFHIPPQSGNDDVLKEMKRGYTVKAFKAVVNRIREATPDAAICGDMIVGFPGETEEQFQDSLKLMEDVKFDVMNTAAYSPRPNTPAAEYSNQISDAMKADRLARMNELVTRHALERSMRYVGRVEHVLVEQESSKTPGEVVGRTPTNRTVRFSGSRE-LRGKIVPVKIVEALPFTLLGEIAGSPY 656          
BLAST of Gvermi12246.t1 vs. uniprot
Match: R7QN23_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN23_CHOCR)

HSP 1 Score: 573 bits (1477), Expect = 2.700e-196
Identity = 291/576 (50.52%), Postives = 395/576 (68.58%), Query Frame = 0
Query:   90 VWKEVTRGKASLDDMATSLSTCSASRETGGDLGWWW--------RDEVVPE--NIDEF----GINDQLLAAALRSRPNRVERVETKNGWHVFVVEEVRHV----LRTKHERTPSRNNPNRKKETNRDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRKVGPAY 647
            V ++V   ++SL ++++ LS C  S+   GD GW          R+ +  E  ++D+      ++ +LL AA+ +RP  ++ V+   GW VFVVE+VRH     LR           PN ++ +    + PV   ++Y IQT GCQMN SDSERMA EL R GY  T DP +++L +LNTC +R+HAE KVYSYLG H  RK   P++VTL VAGCVAQQEG+++L R+PE+D+V GPQYANRIG++L D   N  QI A DPIH+QED SKP R S +TAW+N+++GC E C++C V N  R +EQSRTM +IRAE+ G A+DG REVVLLGQN+DAYGRD+YPK+TFS+LL +IHDV+GIER+RFTT HPRYIS NL+   A LPK+M +FH+PPQSGDN +LK M RGYT E Y  I  R+R+R+PDA IC D IVGFPGE+E+ F+ ++D++ ++ FD     AYS RP T A   ++Q+ + VK  RL  MN L++  A +RS+RY+GR   VLVE  N K   +V+GR  +NR V+FEG+ E+  GKI  ++++ A+ FSL+GR +G A+
Sbjct:    2 VTRQVRAKESSLAELSSLLSVCDTSKSKSGDTGWVQVPNPNMTVRNALADEAQHLDDLVKSVAMHPELLHAAMAARPGALQTVQLSYGWEVFVVEDVRHAVVPTLRGARRGPGFPVTPNMRRTS---PKKPVIDDMSYYIQTFGCQMNVSDSERMAAELERKGYHATDDPKKSALYLLNTCALRDHAEQKVYSYLGPHAQRKWDAPSEVTLVVAGCVAQQEGDKLLSRVPEVDIVMGPQYANRIGEVLDDFAENMMQIVAVDPIHIQEDFSKPVRSSKITAWVNIIYGCLEKCSYCVVPNT-RGLEQSRTMESIRAELQGLARDGYREVVLLGQNVDAYGRDLYPKRTFSDLLRFIHDVDGIERVRFTTGHPRYISENLITTVAELPKVMEHFHVPPQSGDNGVLKEMGRGYTRERYMDIARRVRKRMPDASICADTIVGFPGESEEAFENTVDMVKQVVFDSNMVRAYSARPNTTAGLREDQVEEEVKARRLAVMNRLMREQAEKRSQRYLGRRVEVLVEGVNEKVDGEVMGRERSNRVVFFEGAAEEYVGKIAVVEVDEAFAFSLRGRVIGEAW 573          
BLAST of Gvermi12246.t1 vs. uniprot
Match: A0A2V3IGB2_9FLOR (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB2_9FLOR)

HSP 1 Score: 574 bits (1480), Expect = 1.910e-195
Identity = 293/587 (49.91%), Postives = 394/587 (67.12%), Query Frame = 0
Query:   59 PGHRFHNFSPEDIEAIRIRHCRLESEELCDHVWKEVTRGKASLDDMATSLSTCSASRETGGDLGWWWRDEVVPENIDEFG-INDQLLAAALRSRPNRVERVETKNGWHVFVVEEVRHVLR-TKHERTPSRN---NPNRKKETNRDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKG 640
            P  RF++FS   + AIR+ HCR+ SE +   +   V   +A L  MAT LS C  +R + GD GW        ++      + D+ L  ALR+RP  ++  +   GW V++V ++R  ++ TK   T  +    NPN ++ + +   +   +P ++ IQT GCQMN SDSER+A +L   GY +  DP ++++ +LNTC +R+HAE KVYSYLG H  RK   P  V L VAGCVAQQEG+ +L R+PE+D+V GPQYANRI D+L+    ++ Q+ A DPIH+ EDISKPKR S++TAW+N+++GC E CT+C V N  R +EQSR M++IR EI   A +G REVVLLGQN+DAYGRD+YPK T SELL YIHDV+GIERIRFTT HPRYIS NL+N    LPK+M +FH+PPQSGD+ +LKAM+RGY+ E Y  I  RIRE++PDA IC D IVGFPGET+D FQ ++ L   + FD     AYS RP T AA+  +Q+ + VK++RL  MN  ++  A +RSRRY+GRT  VLVE  NPK +++V GR   NR V+ EG  E L GK++ + +  AYPFSL+G
Sbjct:   74 PPPRFYDFSNHHVHAIRLTHCRVLSEHMASFIHNAVKSRRAMLSQMATLLSVCDQTRLSAGDTGWISTAPHHSKSAQPSSPVPDEFLQVALRARPATLQFEQFSYGWEVYIVSDIRQSVQPTKLGATREKGYTVNPNMRRTSQKPPHI---IPHSFFIQTFGCQMNASDSERIAAQLESQGYHQIDDPNKSAIYMLNTCALRDHAEQKVYSYLGPHAQRKWDAPQQVMLIVAGCVAQQEGDALLSRVPEIDIVMGPQYANRITDVLNLYHTSKAQVVAVDPIHIHEDISKPKRSSSITAWVNIIYGCLERCTYCVVPNT-RGLEQSRPMSSIRREIEALAAEGYREVVLLGQNVDAYGRDLYPKATLSELLRYIHDVDGIERIRFTTGHPRYISENLINTVYELPKVMEHFHVPPQSGDSQVLKAMKRGYSRERYINIARRIREKMPDAAICADTIVGFPGETDDAFQNTVSLADEVVFDANMVRAYSARPNTIAASRPDQVNEEVKMERLAIMNKKMREQAEQRSRRYLGRTVEVLVEGMNPKRSNEVSGRERTNRIVFCEGGTE-LIGKLIEVTVLEAYPFSLRG 655          
BLAST of Gvermi12246.t1 vs. uniprot
Match: UPI001E1DDEB4 (LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDEB4)

HSP 1 Score: 553 bits (1426), Expect = 9.400e-191
Identity = 269/428 (62.85%), Postives = 333/428 (77.80%), Query Frame = 0
Query:  218 MNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKK-TFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRKVG 644
            MNR+DSERMAGEL RLGY +  DPF +++LVLNTC+IR+HAE KVYS +GRH  RK   P+D+TL VAGCVAQQEG ++LRR+P LD+V GPQYA R+GDLL DV+ N  Q+AATDP+H+ EDISKP+RES+VTAW+NV++GC E CT+C V    R +EQSR+M A+RAE+   A+ G REVVLLGQN+DAYGRD+  +  TF+ LL +IHDV GIERIRFTTSHPRY+S+NL++ C  LPK+MP FH+PPQSGDN ILKAM+RGYT E Y  +VN IRE IP+A I GDMIVGFPGETE QFQ SL+L+ +++FD +NTAAYSPRP TPAAT DNQ+ +A K+DRL R+N L    ALERS+RY+GR E +LVE+ + KD   V GR P N+   F G I  LKGK+VP++I     F L+GR  G
Sbjct:    1 MNRADSERMAGELERLGYAKIDDPFSSAVLVLNTCSIRDHAEQKVYSIMGRHAQRKAAAPSDITLVVAGCVAQQEGMQLLRRVPALDIVMGPQYAGRLGDLLEDVQSNHVQVAATDPVHIHEDISKPRRESSVTAWLNVIYGCLERCTYCVVP-FARGLEQSRSMDAVRAELVAIAEQGFREVVLLGQNVDAYGRDLLSEAXTFAGLLRFIHDVPGIERIRFTTSHPRYMSTNLISTCRELPKVMPSFHVPPQSGDNDILKAMKRGYTSERYLAVVNNIREYIPEAAIAGDMIVGFPGETEAQFQNSLELVRKVQFDLLNTAAYSPRPNTPAATWDNQVSEAEKMDRLARINKLQDEIALERSQRYLGRVELILVEDRHAKDILSVTGRTPTNKLTKFAGDITILKGKLVPVQITSVTAFCLEGRIAG 427          
BLAST of Gvermi12246.t1 vs. uniprot
Match: A0A7S0ZI68_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI68_9RHOD)

HSP 1 Score: 548 bits (1412), Expect = 4.230e-185
Identity = 288/598 (48.16%), Postives = 389/598 (65.05%), Query Frame = 0
Query:   62 RFHNFSPEDIEAIRIRHCRLESEELCDHVWKEVTRGKASLDDMATSLSTCSASRETGGDLGWWWRDEVV--------------PENIDEFGINDQLLAAALRSRPNRVERV--ETKNGWHVFVVEEVRHVLRTKHERTPSRNNPNRKKETNRDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRKV 643
            RF+ F P +IE I     +L SE L D++   +    +    +A  LS C  ++++ G  GW     +               P++I    I   LL  A ++RP  V +   E+ + W+VF+V +  H L   H  T S+ + ++     R ++       +Y I+T+GCQ N SDSERMA  L   G+    DP  A ++VLNTC IREHAE KVY +LG H IRK++  + V L V+GCVAQQEGE +LR++PELD++ GPQYANR+G+L+  VE N  QI AT+PIHV ED+S P R S VTAW+NV++GC E CT+C V +  R +EQSR+M +IR EI  AA+ G++E+VLLGQNIDAYGRD+ PK TF++LL YIHDVEGI+RIRF TSHPRY+SS L++ CA L K+  +FH+P QSG + IL+ M RGYT + Y  I+  IR+++P AGI GD IVGFP E+E+QF+ +LDLM  + FD +NTAAYSPRP TPAA M NQ+P+ +K +RL R+N LVK  A ERS RY+G  E VLVE  NPK+ +QV GR   NR V+F+G + +L G +V ++I   + F L G  V
Sbjct:   67 RFYTFEPSNIEYINFSCIQLTSESLADYILDAIKSNPSEFATLANQLSQCEFTKDSHGHFGWIPNPVITLSSQFTIDSPSPQCPQHIIH-SIPSDLLQNAFQTRPLSVTKFYSESNHSWYVFLVNDALHKL---HFETFSKGSTSKLGTDLRFEQN------SYVIETMGCQANSSDSERMASALENAGFHAAKDPKSAHIVVLNTCAIREHAEHKVYGHLGVHAIRKQR-DSRVLLVVSGCVAQQEGETLLRKVPELDIIAGPQYANRLGELVKHVEENGVQICATNPIHVSEDLSNPVRTSKVTAWVNVIYGCNERCTYCVVPST-RGLEQSRSMVSIRNEIVKAAESGVKEIVLLGQNIDAYGRDLTPKNTFTQLLEYIHDVEGIKRIRFLTSHPRYMSSRLIDACAKLEKVCEHFHVPFQSGSDEILQKMSRGYTAQRYLQIIQNIRDKMPHAGISGDAIVGFPEESEEQFESTLDLMRSVGFDLVNTAAYSPRPNTPAALMKNQVPEEIKQERLKRINMLVKQQAAERSARYLGLIEEVLVESMNPKNENQVCGRTQGNRIVFFDGKLSELFGTLVQVRITQTHAFYLMGEVV 652          
BLAST of Gvermi12246.t1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC)

HSP 1 Score: 545 bits (1404), Expect = 8.520e-184
Identity = 289/598 (48.33%), Postives = 388/598 (64.88%), Query Frame = 0
Query:   71 IEAIRIRHCRLESEELCDHVWKEVTRGKASLDDMATSLSTCSASRETGGDLGWW-----WRDEVVPENIDEFGINDQLLAAALRSRPNRVERVETKNGWHVFVVEEVRHVLRTKHERTPSRNNPNRK-----------------KET-----NRDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGR 641
            ++A+R+ H  LE+E L +   + + +G     D+A   S C A+++  G +GW      + D ++P  + E         AA+  +P  +  V +  G H+  VE+V  +L      TP+ + P  K                 K+T       + E        Y + T+GCQMN++DSERMAG+L  LG   T D   A ++VLNTC+IR+ AE KVYS LG    RKR    DVTL VAGCVAQQEGER+LRR+PELDLV GPQYANR+GDLL DV  N  Q+ AT+P  + ED +KP+RES+V AW+NV++GC E+CT+C V N  R VEQSR M ++R E+      G +EV LLGQNID++GRDM+PK+ FS+LL ++ D  G+ERIRF TSHPRYIS  +V+  A  P +M YFHIP Q+GDN +L+ MRRGYT E Y  +++RIR RIP+  I  D+IVGFPGETE+QF+++LDLM ++KFD + TAAYSPRP TPAAT  NQ+PD VK DRL R+N L   HA ER+ RY+GR E VLVEE N K+ +QV+GR   NR V+F+G I +L+G++VP+++    P+SL GR
Sbjct:   47 VQAVRVSHILLETESLAELALERLRQGDVDFADLAEVASICQATKQDKGQVGWVSLKDDFLDPIMPLEVRE---------AAMALKPGDMTTVRSGRGVHIVKVEDVMALL------TPTASQPRSKMPGSGQLLAASGLSRLFKKTVGAADGLEGERERESEWRYFVDTMGCQMNKADSERMAGQLESLGARVTDDAKGADIVVLNTCSIRDKAEQKVYSALGPFAARKRS-GKDVTLVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVA-NGNQVVATEPTFIMEDSTKPRRESSVAAWVNVIYGCNEHCTYCVVPNT-RGVEQSRPMESVRREMEELGALGFKEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIRRRIPEVAISADVIVGFPGETEEQFEQTLDLMRQVKFDCLITAAYSPRPHTPAATWPNQLPDDVKEDRLRRINELAAQHAYERNLRYLGRVEEVLVEERNVKNPTQVMGRTRGNRLVFFDGDIAELRGRMVPVRVTEVRPYSLTGR 626          
BLAST of Gvermi12246.t1 vs. uniprot
Match: A0A7S2ZBX3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBX3_9RHOD)

HSP 1 Score: 532 bits (1370), Expect = 1.770e-179
Identity = 283/578 (48.96%), Postives = 373/578 (64.53%), Query Frame = 0
Query:   72 EAIRIRHCRLESEELCDHVWKEVTR-GKASLDDMATSLSTCSASRETGGDLGWWWRDEV-VPENIDEFGINDQLLAAALRSRPNRVERVETKNGWHVFVVEEVRHVLRTKH---ERTPSRNNPNRKKETNRDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRKVG 644
            +  R+ H  + SEELCD V +E  + G  S+   + S+S C AS+  GGDLGW  +     PE +D     D             V +  + +GWH   V++V+  +        RT  R   N  K   + ++       +Y I+T GCQMN+SDSERMAGEL  +G        +A ++V NTC+IREHAE K+YS LG    RK  YP ++ + VAGCVAQQE  R+ RR+PE+DL+ GPQYANR+G+LL DV +   Q+ AT+  H+ ED+SKP R   ++AW+N+++GC E CT+C V N  R VEQSRT  AIRAEI   A+ G REV LLGQN DAYGRD+ P+ TF+ELL  +HDV+GIERIRFTTSHPRY + NL   C+ L K+   F++P QSGD  +LKAM RGYTVE Y  ++ +IRE IPDA I  D IVGFPGETE+QFQ +L+LM  I+FD ++TAAYSPRP TP ATM+NQ+ D+ K  RL R N   +  +L R++RY+GR E VLV E N ++  QV+GR   NR  YFEG+IE+L+GK+VP+KI     F+L G + G
Sbjct:   53 DRFRVLHVLVLSEELCDFVIEEGRKNGAESIRKYSESISVCKASKHNGGDLGWHTKQTFPFPEIVDVVSSTDPHTG---------VFKARSASGWHAVYVDDVKRAIELTSWTPTRTFRRTGQNLGKIRVKREQQEW---NSYFIETHGCQMNKSDSERMAGELEAMGMQVARTMKEADVIVFNTCSIREHAEHKLYSQLGPIAQRKWTYP-NIAVVVAGCVAQQEASRLARRVPEVDLIVGPQYANRLGELLQDVAQGN-QVVATEASHITEDLSKPIRVGGISAWVNIIYGCNERCTYCVVPNT-RGVEQSRTPQAIRAEIEELARQGYREVTLLGQNTDAYGRDLKPRVTFAELLRTVHDVDGIERIRFTTSHPRYFTKNLAETCSELSKVCESFNVPFQSGDTDVLKAMNRGYTVERYREVIRQIREEIPDAAITADTIVGFPGETEEQFQNTLELMEEIQFDHVHTAAYSPRPNTPGATMENQVSDSEKESRLRRANRRNEMDSLSRNQRYLGRVEEVLVTERNSRNEKQVMGRTRKNRVTYFEGNIEELRGKLVPVKIVEVGTFTLTGTQAG 615          
BLAST of Gvermi12246.t1 vs. uniprot
Match: A0A7S2S7D0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D0_9STRA)

HSP 1 Score: 531 bits (1367), Expect = 9.980e-179
Identity = 285/585 (48.72%), Postives = 382/585 (65.30%), Query Frame = 0
Query:   69 EDIEAIRIRHCRLESEELCDHVWKEVTRGKASLDDMATSLSTCSASRETGGDLGWWWRDEVVPENIDEFGINDQLLAAALRSRPNRVERVETKNGWHVFVVEEVRHVLRTKHERTPSRNNPNRKKETNRDDEVPVPMPL---------TYAIQTLGCQMNRSDSERMAGELCRLGYVETSDP--FQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERI--PDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKG 640
            +D+ A+R+ H  L ++E+     ++V  G+   +D+A ++S C  SRE GG +GW   ++   +++    +     A AL  +P  V   ET+ G H+  +E++   L+T       R  P + +     +E+P              TY ++T+GCQMN +D+ERMAG+L  LG V  S+    +A+++VLNTC+IR+HAE KVYSYLG H  RKR+    V + VAGCVAQQEGE++LRR+PE+DLV GPQY+NRIGDLL DV  N  Q+ ATDP+H+ ED++KP+R STV AW+NV++GC E+CT+C V    R VEQSR   AIR E+    K G REV LLGQNIDA+GRDM P++ FSELL  +  V GIER+RF TSHPRY+S  +++           FHIP QSGDN +LK MRRGYT E Y  IV RIRE+    D  I GD+IVGFPGETE+QFQ +L L+  +KFD   TAAYSPRP T AAT +NQ+P+ VK DRL R+      HALE S+RY+ RTE V+VE  N K+ +QV+GR   NR+V+F+G I++LKGK V +KI    P+SL G
Sbjct:   61 KDVMAVRVSHVLLHTKEMATACLEQVKSGR-DFNDLALAISICEESREEGGKIGWVGLNDTPVDHL----LPAVARAHALEYKPGDVFLTETERGHHLVKIEDIMTRLKT-------RTKPRKPRLKGPGNELPSLTEQLSGLSGAKPTYFMETMGCQMNFADTERMAGQLEDLGLVPVSEEERLKANVIVLNTCSIRDHAEQKVYSYLGPHANRKRR-GEPVAIVVAGCVAQQEGEQLLRRVPEVDLVMGPQYSNRIGDLLEDV-MNGNQVVATDPLHIMEDVTKPRRGSTVCAWVNVIYGCNEHCTYCVVPGT-RGVEQSRPREAIRQEVEDLVKQGYREVTLLGQNIDAWGRDMQPRQRFSELLRDVSSVPGIERVRFVTSHPRYMSPRVISAVYEEDSACEMFHIPFQSGDNEVLKNMRRGYTRERYLDIVRRIREKFGDKDVSITGDIIVGFPGETEEQFQNTLALLEEVKFDACMTAAYSPRPNTQAATWENQVPEDVKQDRLQRVKRACDTHALEVSQRYLHRTEEVMVETRNIKNPTQVMGRTRTNRQVFFDGDIDELKGKFVHVKITEVRPYSLSG 630          
BLAST of Gvermi12246.t1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 1.140e-178
Identity = 290/634 (45.74%), Postives = 393/634 (61.99%), Query Frame = 0
Query:   70 DIEAIRIRHCRLESEELCDHVWKEVTRGKASLDDMATSLSTCSASRETGGDLGWWWRDE--------------------------VVPENIDEFGINDQ-----------------------LLAAALRS-----RPNRVERVETKNGWHVFVVEEVRHVLRTKHERTPSRNNPNRKKETN--RDDEVPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRIPELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTVTAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREVVLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNLVNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIPDAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAATMDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDASQVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRKVGPAY 647
            ++EA+ +RH  +++E L     +++  G     ++A+S+S C A+R  GG++GW    +                          V+P  + + G  +Q                       +L  A R+     +P  V    T  GWHV  +++V   L     +  S         T+  R  +      L+Y ++T+GCQMN +DSERM G++  LG  +T D  +AS+ VLNTC+IR+HAE KVYSY+G + IRK+K   ++ + VAGCVAQQEGE++LRR+PE+DLV GPQYANR+GDLL DV  N  QI ATDP  + ED+SKP+R S+  AW+N+++GC E+CT+C V  V R VEQSR   +IR E+   A  G REV LLGQN+DAYGRDM P+ +F++LL Y+ DV GIER+RF TSHPRY+S ++V+  ANLP +   F +P QSGDN +LK MRRGYT+  Y  I++RIRE  PDA I GD+IVGFPGETE+QFQ +LDLM R+KFD +NT +YSPRP T AA  +NQ+P+ VK DRL R+  L   HA ERS RY+GR E VLVEE NPK+A+QV+GR   NR V+  G I +LKGK++  +I    P+SL G   G  Y
Sbjct:  101 NVEAMYVRHILVQTEGLAKTCLEQIREG-VDFGELASSISDCQATRAKGGEVGWASTPQGQRVEPIATSPPKSPQLAVPASAAARVLPAGLSQNGEAEQGSQQQAEEALSGAMADADAGMEEILPLAARTALLDYKPGDVLVTPTGRGWHVIKIDDVMTRLSATARKAASNRQAGAGLTTSSLRSLQGEGTQALSYFMETMGCQMNVADSERMEGQMADLGIQKTEDKTEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQK-GENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDV-MNGNQIVATDPSLIMEDVSKPRRGSSTCAWVNIIYGCNEHCTYCVVPGV-RGVEQSRPKESIRQEMVELAAAGYREVTLLGQNVDAYGRDMNPRNSFADLLHYVSDVPGIERVRFVTSHPRYMSLDVVDAVANLPSMAECFMVPFQSGDNEVLKNMRRGYTITRYMRIIDRIRELSPDAAITGDVIVGFPGETEEQFQHTLDLMERVKFDNLNTFSYSPRPNTEAALWENQVPEDVKADRLQRVMRLGCTHAQERSDRYMGRVEEVLVEERNPKNAAQVMGRTRTNRPVFLNGDIGELKGKLIKAEITECRPWSLTGVAQGEPY 730          
The following BLAST results are available for this feature:
BLAST of Gvermi12246.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J037_9FLOR0.000e+073.59tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
R7QB29_CHOCR1.890e-31569.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QN23_CHOCR2.700e-19650.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IGB2_9FLOR1.910e-19549.91tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
UPI001E1DDEB49.400e-19162.85LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimeth... [more]
A0A7S0ZI68_9RHOD4.230e-18548.16Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A0G4ERE5_VITBC8.520e-18448.33Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2ZBX3_9RHOD1.770e-17948.96Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2S7D0_9STRA9.980e-17948.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5KNX7_9PHAE1.140e-17845.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 350..569
e-value: 2.8E-50
score: 183.0
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 354..526
e-value: 1.1E-22
score: 81.2
IPR007197Radical SAMSFLDSFLDS00029Radical_SAMcoord: 208..643
e-value: 0.0
score: 490.9
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 346..577
score: 32.751766
NoneNo IPR availableTIGRFAMTIGR01574TIGR01574coord: 209..641
e-value: 2.1E-125
score: 417.1
NoneNo IPR availableGENE3D3.10.50.40coord: 70..178
e-value: 1.2E-11
score: 46.9
NoneNo IPR availablePFAMPF13616Rotamase_3coord: 82..171
e-value: 3.1E-5
score: 24.5
NoneNo IPR availableSFLDSFLDG01082B12-binding_domain_containingcoord: 289..553
e-value: 1.9E-26
score: 87.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..199
NoneNo IPR availablePANTHERPTHR43020CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1coord: 169..643
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 354..556
e-value: 3.68323E-9
score: 55.0321
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 346..577
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 70..171
IPR013848Methylthiotransferase, N-terminalPFAMPF00919UPF0004coord: 209..308
e-value: 6.2E-25
score: 87.1
IPR013848Methylthiotransferase, N-terminalPROSITEPS51449MTTASE_Ncoord: 207..324
score: 32.17448
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20tm_1862 like domaincoord: 347..583
e-value: 1.5E-78
score: 265.5
IPR005839MethylthiotransferaseTIGRFAMTIGR00089TIGR00089coord: 208..640
e-value: 1.0E-138
score: 460.7
IPR002792TRAM domainPFAMPF01938TRAMcoord: 580..642
e-value: 1.2E-12
score: 47.6
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 580..644
score: 14.099489
IPR038135Methylthiotransferase, N-terminal domain superfamilyGENE3D3.40.50.12160coord: 207..340
e-value: 1.1E-31
score: 111.1
IPR006463tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaBSFLDSFLDF00273(dimethylallyl)adenosine_tRNAcoord: 208..643
e-value: 0.0
score: 490.9
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 71..171
score: 12.232341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3967242..3969185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12246.t1Gvermi12246.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3967242..3969185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12246.t1 ID=Gvermi12246.t1|Name=Gvermi12246.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=648bp
MLDKLAFTSAGFYGSSDNWQSSKLPRARQLCHQRVRTTTTAVLQQQNLQS
RKLFAPGEPGHRFHNFSPEDIEAIRIRHCRLESEELCDHVWKEVTRGKAS
LDDMATSLSTCSASRETGGDLGWWWRDEVVPENIDEFGINDQLLAAALRS
RPNRVERVETKNGWHVFVVEEVRHVLRTKHERTPSRNNPNRKKETNRDDE
VPVPMPLTYAIQTLGCQMNRSDSERMAGELCRLGYVETSDPFQASLLVLN
TCNIREHAESKVYSYLGRHVIRKRKYPTDVTLCVAGCVAQQEGERMLRRI
PELDLVFGPQYANRIGDLLSDVERNRCQIAATDPIHVQEDISKPKRESTV
TAWINVMHGCGENCTFCTVGNVVRSVEQSRTMAAIRAEITGAAKDGIREV
VLLGQNIDAYGRDMYPKKTFSELLTYIHDVEGIERIRFTTSHPRYISSNL
VNVCANLPKIMPYFHIPPQSGDNAILKAMRRGYTVETYETIVNRIRERIP
DAGICGDMIVGFPGETEDQFQRSLDLMTRIKFDGMNTAAYSPRPQTPAAT
MDNQIPDAVKVDRLHRMNSLVKAHALERSRRYVGRTEYVLVEEENPKDAS
QVIGRNPANRRVYFEGSIEDLKGKIVPIKIEHAYPFSLKGRKVGPAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR007197rSAM
IPR013848Methylthiotransferase_N
IPR023404rSAM_horseshoe
IPR005839Methylthiotransferase
IPR002792TRAM_dom
IPR038135Methylthiotransferase_N_sf
IPR006463MiaB_methiolase
IPR000297PPIase_PpiC