Gvermi12250.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12250.t1
Unique NameGvermi12250.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length130
Homology
BLAST of Gvermi12250.t1 vs. uniprot
Match: A0A2V3J1E3_9FLOR (Nuclear transport factor 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1E3_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 3.740e-59
Identity = 86/129 (66.67%), Postives = 108/129 (83.72%), Query Frame = 0
Query:    1 MTMEVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            M  ++E IG AFVN+YY+IFD+NRENLR LY++ S+LTFEG+ C+G + I+ KLT+L L++V+H+I +MD QPT  VQPNGI++SVSGNL+LDNEQNP+KFAQCFYLLP   E  NFWV NDIFRLNYG
Sbjct:    1 MADQMEQIGTAFVNYYYSIFDSNRENLRPLYKDQSVLTFEGQKCMGADEIMNKLTSLGLKQVKHKIITMDVQPTLAVQPNGILVSVSGNLVLDNEQNPVKFAQCFYLLP---EGSNFWVQNDIFRLNYG 126          
BLAST of Gvermi12250.t1 vs. uniprot
Match: R7QSP7_CHOCR (Nuclear transport factor 2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSP7_CHOCR)

HSP 1 Score: 168 bits (425), Expect = 1.700e-51
Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 0
Query:    1 MTMEVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            MT   +++G+AF   YY++FD+NR  L  LYRE S+L+FEG   +G + I+ KL  LP Q+V+H+I + DCQPT  VQPNGI+ISVSGNL++D+  NPMKFAQCF+LLP P    NFWV NDIFRLN G
Sbjct:    1 MTTSFQSVGEAFTKTYYSLFDSNRSQLLPLYREQSMLSFEGSQFMGAQAIVNKLVELPFQRVKHEIVTCDCQPTMAVQPNGILISVSGNLVIDDNVNPMKFAQCFHLLPDPASPNNFWVHNDIFRLNLG 129          
BLAST of Gvermi12250.t1 vs. uniprot
Match: M2Y8E2_GALSU (Nuclear transport factor, putative n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8E2_GALSU)

HSP 1 Score: 164 bits (414), Expect = 1.410e-49
Identity = 74/124 (59.68%), Postives = 97/124 (78.23%), Query Frame = 0
Query:    6 ENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            E +G+AFV HYYN FD++R NL  LYRE S+LTFEGE  +G + I+ KL+ LP QKV+HQI + DCQPT   QP+GI++ V+GNL++D+ QNP+KF+QCFYLLP    A ++WV ND+FRLNYG
Sbjct:   25 EQVGEAFVQHYYNTFDSSRSNLGPLYRENSMLTFEGEKYMGVQQIVGKLSALPFQKVQHQIVTCDCQPTQ-TQPSGILVFVNGNLLVDDSQNPLKFSQCFYLLPDSTNAASYWVHNDMFRLNYG 147          
BLAST of Gvermi12250.t1 vs. uniprot
Match: A0A5J4YZW0_PORPP (Nuclear transport factor 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZW0_PORPP)

HSP 1 Score: 149 bits (377), Expect = 3.760e-44
Identity = 68/126 (53.97%), Postives = 90/126 (71.43%), Query Frame = 0
Query:    4 EVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            + + +G+AFV HYY  FD+NR  L  LYR+ S+LTFEGE  +GP+ I++KL  LP Q V HQ+ + DCQP    QPNGI++ VSGNL++D+  N MKF+Q F LLP P    +F+V ND+FRLNYG
Sbjct:    7 QFQQVGEAFVAHYYQNFDSNRGGLAPLYRDTSMLTFEGEQFMGPQAIVQKLQGLPFQTVVHQVVTCDCQPVIGSQPNGIVVFVSGNLVVDDSPNAMKFSQTFNLLPDPANPSSFFVHNDLFRLNYG 132          
BLAST of Gvermi12250.t1 vs. uniprot
Match: A0A7S0ZAF8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAF8_9RHOD)

HSP 1 Score: 149 bits (377), Expect = 4.250e-44
Identity = 69/124 (55.65%), Postives = 92/124 (74.19%), Query Frame = 0
Query:    6 ENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            +++G++FV HYY  FDTNR NL  LYR+ S+L+FEGE  +G + II+KL +LP QKV HQI + DCQP    QPNGI++ VSGNL++D+  NPMKF+Q F LL  P    +++V ND+FRLNYG
Sbjct:   13 QSVGESFVAHYYQNFDTNRANLAPLYRDNSMLSFEGEQFMGIQPIIQKLVSLPFQKVVHQIVTCDCQPVLASQPNGILVFVSGNLVVDDSPNPMKFSQTFNLLSDPSNPNSYFVHNDLFRLNYG 136          
BLAST of Gvermi12250.t1 vs. uniprot
Match: A0A200QRR3_9MAGN (Nuclear transport factor 2 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QRR3_9MAGN)

HSP 1 Score: 146 bits (369), Expect = 4.990e-43
Identity = 70/129 (54.26%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    1 MTMEVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            M  E+E++G+AFVNHYYN+FDTNR +L SLY+  SIL+FEG+T +G E+I  KL  LP  + +H IT++DCQP+ F  P GI++ VSGNL L  E++ +KF+Q F+L+P   +  N +V+NDIFRLNYG
Sbjct:    1 MEGEIESVGRAFVNHYYNLFDTNRSSLFSLYQPTSILSFEGQTIVGGEHIATKLIQLPFDQCQHFITTIDCQPSSF--PGGILVFVSGNLQLSGEEHHLKFSQLFHLIPT--QQGNIFVANDIFRLNYG 125          
BLAST of Gvermi12250.t1 vs. uniprot
Match: A0A7S3AB15_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AB15_9RHOD)

HSP 1 Score: 145 bits (367), Expect = 1.040e-42
Identity = 67/126 (53.17%), Postives = 92/126 (73.02%), Query Frame = 0
Query:    4 EVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            + + IG+AFV HYY+ FDTNR  L SLY+  S+L+FEGET +G E I++KL NL  Q+V+HQ+T+ D QP    QPN I++ VSG L++D+  NP+KF+Q F+L+P  G    +WV ND+FRLNYG
Sbjct:    4 QYQQIGEAFVKHYYSTFDTNRAGLVSLYQGNSMLSFEGETFMGAEAIVQKLANLSFQRVQHQVTTFDVQPVVAAQPNSILVFVSGQLLVDDSTNPIKFSQTFHLMPKEG---GYWVHNDMFRLNYG 126          
BLAST of Gvermi12250.t1 vs. uniprot
Match: M1V7U4_CYAM1 (Similar to nuclear transport factor 2 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V7U4_CYAM1)

HSP 1 Score: 145 bits (366), Expect = 1.720e-42
Identity = 66/124 (53.23%), Postives = 88/124 (70.97%), Query Frame = 0
Query:    6 ENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNYG 129
            E + +AFVNHYY++FDT+R  L +LYRE S+LTFEG  C+G   I +KL +LP QKVRHQ+ + D QP      NG+++ V+G+L +D+   P+KFAQ F+LLP  G    FWV ND+FRLNYG
Sbjct:    8 ELLAEAFVNHYYSVFDTDRTQLAALYREVSMLTFEGNACMGASAITEKLVSLPFQKVRHQVVTCDAQPVLPESLNGVLVFVNGDLTVDDSNQPIKFAQVFHLLPDQGNPGMFWVYNDLFRLNYG 131          
BLAST of Gvermi12250.t1 vs. uniprot
Match: A0A7C9D2F4_OPUST (NTF2 domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9D2F4_OPUST)

HSP 1 Score: 140 bits (354), Expect = 8.960e-41
Identity = 66/126 (52.38%), Postives = 90/126 (71.43%), Query Frame = 0
Query:    3 MEVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNY 128
            M+ E + KAFV HYY  FDTNR  L +LY+E S+LTFEG+   G +NI+ KL +LP ++ +H IT+ DCQP+G   P  +++ VSGNL L  EQ+P+KF+Q F+L+P P    +F+V NDIFRLNY
Sbjct:    1 MDAEQVAKAFVEHYYTTFDTNRAGLANLYQENSMLTFEGQKFAGAQNIVAKLASLPFEQCKHSITTTDCQPSG--APGALLVFVSGNLQLAGEQHPLKFSQMFHLMPTP--QGSFYVLNDIFRLNY 122          
BLAST of Gvermi12250.t1 vs. uniprot
Match: A0A200R447_9MAGN (Nuclear transport factor 2 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R447_9MAGN)

HSP 1 Score: 140 bits (352), Expect = 1.810e-40
Identity = 68/126 (53.97%), Postives = 91/126 (72.22%), Query Frame = 0
Query:    3 MEVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENIIKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMKFAQCFYLLPVPGEAQNFWVSNDIFRLNY 128
            M+ + + KAFV HYY  FDTNR NL +LY+E S+LTFEGE   G +NI+ KL  LP Q+ +H IT++DCQP+G V   G+++ VSGNL L  EQ+ +KF+Q F+L+P P    +F+V NDIFRLNY
Sbjct:    1 MDPDAVSKAFVEHYYTTFDTNRGNLANLYQESSMLTFEGEKIQGSQNIVAKLAGLPFQQCKHNITTVDCQPSGPV--GGMLVFVSGNLTLAGEQHSLKFSQMFHLMPTP--QGSFFVLNDIFRLNY 122          
The following BLAST results are available for this feature:
BLAST of Gvermi12250.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1E3_9FLOR3.740e-5966.67Nuclear transport factor 2 n=1 Tax=Gracilariopsis ... [more]
R7QSP7_CHOCR1.700e-5158.14Nuclear transport factor 2 n=1 Tax=Chondrus crispu... [more]
M2Y8E2_GALSU1.410e-4959.68Nuclear transport factor, putative n=1 Tax=Galdier... [more]
A0A5J4YZW0_PORPP3.760e-4453.97Nuclear transport factor 2 n=1 Tax=Porphyridium pu... [more]
A0A7S0ZAF8_9RHOD4.250e-4455.65Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A200QRR3_9MAGN4.990e-4354.26Nuclear transport factor 2 n=1 Tax=Macleaya cordat... [more]
A0A7S3AB15_9RHOD1.040e-4253.17Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M1V7U4_CYAM11.720e-4253.23Similar to nuclear transport factor 2 n=1 Tax=Cyan... [more]
A0A7C9D2F4_OPUST8.960e-4152.38NTF2 domain-containing protein n=2 Tax=Opuntia str... [more]
A0A200R447_9MAGN1.810e-4053.97Nuclear transport factor 2 n=1 Tax=Macleaya cordat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 1..129
e-value: 1.8E-38
score: 133.5
IPR002075Nuclear transport factor 2 domainPFAMPF02136NTF2coord: 8..126
e-value: 8.3E-29
score: 100.6
IPR045875Nuclear transport factor 2/Mtr2PANTHERPTHR12612NUCLEAR TRANSPORT FACTOR 2coord: 3..128
IPR018222Nuclear transport factor 2, eukaryotePROSITEPS50177NTF2_DOMAINcoord: 8..126
score: 32.350456
IPR018222Nuclear transport factor 2, eukaryoteCDDcd00780NTF2coord: 5..128
e-value: 3.94885E-43
score: 135.873
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 5..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3973792..3974397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12250.t1Gvermi12250.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3973792..3974397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12250.t1 ID=Gvermi12250.t1|Name=Gvermi12250.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=130bp
MTMEVENIGKAFVNHYYNIFDTNRENLRSLYREPSILTFEGETCLGPENI
IKKLTNLPLQKVRHQITSMDCQPTGFVQPNGIIISVSGNLILDNEQNPMK
FAQCFYLLPVPGEAQNFWVSNDIFRLNYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002075NTF2_dom
IPR045875NTF2/Mtr2
IPR018222Nuclear_transport_factor_2_euk
IPR032710NTF2-like_dom_sf