Gvermi12225.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12225.t1
Unique NameGvermi12225.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length284
Homology
BLAST of Gvermi12225.t1 vs. uniprot
Match: A0A2V3J033_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J033_9FLOR)

HSP 1 Score: 363 bits (931), Expect = 1.250e-123
Identity = 173/283 (61.13%), Postives = 223/283 (78.80%), Query Frame = 0
Query:    1 MLQFLSSLKTEYASFEAHPQTIIVGTNEARKTFSKDLDGLLLTREHAIVSDLHILNCFHRQPDWRYVAIVSTASELYTIAKHVRTASKIHATNFVVIGVQCDLGRGVALRTAALKELDAAGVVLVEESDGRGRKVFEEILRTWRENKDDDAMLSVWGEASLASAKDKIIPPRWDSEGKISAVVDAAGESHQALLDASTWGTEIQPPPVNLSTEQMKSERQQLGKRKKEEYLQGFHAWTTRMQQLAEKTKQNPGNDVTDIDGVETNKDAPTQADFFQKLLAGTR 283
            ML+ LS LK EY  +  HPQTIIVGTNE+R  F++ L+G+L T  +AI+ DLHILN   RQPDWRY+A+VS+A+ELYTIA  VRT + I +TNFVV+GV+CDLG+GVALRTAAL ELDA G++LV+E +GR ++VF +IL TWRE+ DD+++LSVWGEASLA AKD +IPP+WDSEGKI AVVDAAGE + AL+    WGT+++PP + L TEQ + E +  G+RKK E++Q +  W  RMQ+LAE+ +Q PG+ V+D+DG  T+  AP QADFFQKLLAGTR
Sbjct:    1 MLESLSKLKAEYEPYPVHPQTIIVGTNESRTAFNETLEGVLHTIPNAIICDLHILNSIQRQPDWRYIAVVSSAAELYTIATAVRTVAHIRSTNFVVLGVKCDLGQGVALRTAALHELDAPGLILVQEQNGRAKQVFNDILHTWRESADDNSVLSVWGEASLARAKDTVIPPKWDSEGKIRAVVDAAGEDYDALISTPPWGTQVEPPQIELLTEQKQEELRAEGRRKKTEFIQRYKGWGARMQELAERARQKPGDQVSDVDGSSTSDRAPAQADFFQKLLAGTR 283          
BLAST of Gvermi12225.t1 vs. uniprot
Match: R7Q5U9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5U9_CHOCR)

HSP 1 Score: 134 bits (336), Expect = 1.010e-33
Identity = 94/288 (32.64%), Postives = 140/288 (48.61%), Query Frame = 0
Query:   20 QTIIVGTNEARKTFSKDLDGLLLTREHAIVSDLHILNCFHRQPDWRYVAIVSTASELYTIAKHVRTASKIHATNFVVIGVQCDLGRG-VALRTAALKELDAAGVVLVE---ESDGRGRKVFEEILRTWRE------NKDDDAMLSVWGEASLASAKDKIIPPRWDSEGKISAVVDAAGESHQALLDASTWGTEIQPP-----PVNLSTEQMKSERQQLGK------RKKEEYLQGFHAWTTRMQQLAEKTKQNPGNDVTDIDGVETNKDAPT-------QADFFQKLL 279
            QT I GT EARKTF+    G+L   + A+  D+  L   H + +W++V IV TA+EL  I+ H+ + +     N +VI V    G+   A+R+AAL  L   G+V+     E  GR  ++ + +L  W +      N D   +L +WGE SL+SA D IIPP WDSEGKI AV DAAG  +  ++  S+W            PV    E+M   +++  K      RK++ +L+         QQ  E   +            ++ +  P        +ADFFQ+LL
Sbjct:   20 QTFIAGTEEARKTFNPSYTGILAPVDTALTCDILALQAMHSRQNWQWVVIVETAAELREISAHIESPNP----NRIVIAVVSRDGKEQCAIRSAALNYLGGMGLVIPTGSGEKTGRAVQLVQRLLHAWGQGSLDMTNSDHAPLLRIWGEPSLSSAVDVIIPPGWDSEGKIRAVADAAGWDYDEIIRDSSWNRPTSSEEAIRLPVLTEAEEMVKFQEEAAKMREEDMRKEQSWLKSLEVKIATHQQAQEAATEKAKIASASGSAAKSKQTVPAHPKPSRAKADFFQRLL 303          
The following BLAST results are available for this feature:
BLAST of Gvermi12225.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J033_9FLOR1.250e-12361.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5U9_CHOCR1.010e-3332.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3905039..3905890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12225.t1Gvermi12225.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3905039..3905890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12225.t1 ID=Gvermi12225.t1|Name=Gvermi12225.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=284bp
MLQFLSSLKTEYASFEAHPQTIIVGTNEARKTFSKDLDGLLLTREHAIVS
DLHILNCFHRQPDWRYVAIVSTASELYTIAKHVRTASKIHATNFVVIGVQ
CDLGRGVALRTAALKELDAAGVVLVEESDGRGRKVFEEILRTWRENKDDD
AMLSVWGEASLASAKDKIIPPRWDSEGKISAVVDAAGESHQALLDASTWG
TEIQPPPVNLSTEQMKSERQQLGKRKKEEYLQGFHAWTTRMQQLAEKTKQ
NPGNDVTDIDGVETNKDAPTQADFFQKLLAGTR*
back to top