Gvermi12233.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12233.t1
Unique NameGvermi12233.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length439
Homology
BLAST of Gvermi12233.t1 vs. uniprot
Match: A0A2V3J2Z2_9FLOR (MOSC_N domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z2_9FLOR)

HSP 1 Score: 314 bits (804), Expect = 1.390e-99
Identity = 195/473 (41.23%), Postives = 271/473 (57.29%), Query Frame = 0
Query:    1 MTHQSGLLLIRAQDASVAIAFASRFALVCIANFAFGFGAGYLYSQYRNLCASDEEDDHAASAENDKPSVTQVSANNEQHSTTVPNSVVEEQYESLETASGK------------------------FMDSQPSAAEPKSPPSTPLRADGEPISLRQNLVYPNAEQSASETPNQELHGDLEELN-TALAKED------EKLSLASETTGFE-------TAMGEEQENK---------SIVGLQIQPIHGCLSQSVTSLKISQHGVENHLLYAVSEFTGRFISNEKVPALSQVAPVILDNGHLSVSAPGQSTIVHEPRLWGQMKKITIHGVHYDAVDQGDNASKFFANYLEIPGVRLLLVRPPPLLDEGHGVSQAWPSVDRPLLIASGESMTFAEDKCNAPVGTNLVISGSESDLSRSKIINIDDNVFEVVKITGESSDGNAPMQHLHGGGNALIPANLGKNECSLVKGQMISIVE 426
            M HQSGLLLIRAQDAS AIAFASRFALVCIANFAFGFGAGY+++ YRN C  ++E++            TQVS + E+ +        E Q E L                              +  ++ S  EPKSPP TPLR + + +S  + L  P+A    SE    +LH  + +   TA A+E       EK  +  + T  E       TA   E +           S+  L IQPIHGC +QSV SL+++Q+GVENHL+YAV+EFTGR+IS++KVPAL +V+P +L+NG L + AP  + + H+ + WGQMK+ITI GV Y+AVDQGD  SKFF ++LEIPGVRLLL+RPPP+  E     + WPS DRPLL+A G  +       + P+  N+ +S + S++     I I D  FE+VK    +S  +   ++    G+ L+P +L ++E +L  GQ++++ E
Sbjct:    1 MAHQSGLLLIRAQDASAAIAFASRFALVCIANFAFGFGAGYIFAHYRNSCEVEQEEE-----------TTQVSLSKEEET--------ECQAEELNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTPAESSQPEPKSPPGTPLRTEDDSLSENEILTNPDARPLPSEASQVKLHEAMPQFEKTATAEEQVYAHVAEKTDIDDDDTXSEVQESPTLTAADAEADGSQLQESTGEISVAQLHIQPIHGCRAQSVASLRLNQNGVENHLMYAVAEFTGRYISDDKVPALREVSPTVLENGDLYLEAPDVTPLRHQRKSWGQMKRITICGVQYEAVDQGDIVSKFFVDFLEIPGVRLLLIRPPPIAGESGQTFRTWPSADRPLLLA-GADVVPQNSNSDLPLRPNVGLSNTHSEMESWMQIKIGDYSFELVKTDVSNSTDSTTTENQKHAGHVLLPVDLKRDEWTLRSGQVVTVTE 453          
BLAST of Gvermi12233.t1 vs. uniprot
Match: A0A7W7WWU0_9PSEU (MOSC domain-containing protein n=2 Tax=Saccharothrix violaceirubra TaxID=413306 RepID=A0A7W7WWU0_9PSEU)

HSP 1 Score: 67.0 bits (162), Expect = 7.800e-9
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 0
Query:  190 IVGLQIQPIHGCLSQSVTSLKISQHGVENHLLYAVSEFTGRFISNEKVPALSQVAPVILDNGHLSVSAP--GQSTIVHEPRLWGQMKKITIHGVHYDAVDQGDNASKFFANYLEIPGVRLLLVRPPP 314
            I  L   P+ GC    +T+  ++  G+ +   Y V+   G F +    P L+ + P   D G L+++AP  G++ I H+P      + +T+ GVHY+A+DQGD A+ +  + L  P     LVR PP
Sbjct:    4 ITRLTTYPVKGCAGVDLTTTTLTTAGLRHDRDYMVTSPDGTFRTQRTDPTLALITPTADDTG-LTLTAPDAGETRIPHDPTA--PRRTVTLFGVHYEALDQGDEAADWLTHVLRTPS---RLVRVPP 124          
The following BLAST results are available for this feature:
BLAST of Gvermi12233.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2Z2_9FLOR1.390e-9941.23MOSC_N domain-containing protein n=1 Tax=Gracilari... [more]
A0A7W7WWU0_9PSEU7.800e-932.28MOSC domain-containing protein n=2 Tax=Saccharothr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..438
NoneNo IPR availableSUPERFAMILY141673MOSC N-terminal domain-likecoord: 192..312
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR005303MOSC, N-terminal beta barrelPFAMPF03476MOSC_Ncoord: 189..302
e-value: 1.7E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3932746..3934062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12233.t1Gvermi12233.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3932746..3934062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12233.t1 ID=Gvermi12233.t1|Name=Gvermi12233.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=439bp
MTHQSGLLLIRAQDASVAIAFASRFALVCIANFAFGFGAGYLYSQYRNLC
ASDEEDDHAASAENDKPSVTQVSANNEQHSTTVPNSVVEEQYESLETASG
KFMDSQPSAAEPKSPPSTPLRADGEPISLRQNLVYPNAEQSASETPNQEL
HGDLEELNTALAKEDEKLSLASETTGFETAMGEEQENKSIVGLQIQPIHG
CLSQSVTSLKISQHGVENHLLYAVSEFTGRFISNEKVPALSQVAPVILDN
GHLSVSAPGQSTIVHEPRLWGQMKKITIHGVHYDAVDQGDNASKFFANYL
EIPGVRLLLVRPPPLLDEGHGVSQAWPSVDRPLLIASGESMTFAEDKCNA
PVGTNLVISGSESDLSRSKIINIDDNVFEVVKITGESSDGNAPMQHLHGG
GNALIPANLGKNECSLVKGQMISIVEFRSEQLVRESSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005303MOSC_N