Gvermi12172.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12172.t1
Unique Name	Gvermi12172.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	542

Homology

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BLAST of Gvermi12172.t1 vs. uniprot
Match: A0A2V3J5U7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U7_9FLOR)

HSP 1 Score: 547 bits (1409), Expect = 3.950e-188
Identity = 285/539 (52.88%), Postives = 375/539 (69.57%), Query Frame = 0

Query:    8 GPPPVPDSIKQLDMLEFHRRQAAEPMPSLPPEVLQAIRERYPRIKKLDQVMEREMSRDDYDINDHRVCSWAYEYLRPWAMGRPLQALIACSTAYSTVKLVQYVKSRVSQTVLMSALVSVDTFFTVALGAVFPAFLLSWALHRARFNDVRTDGVRRSVFMFCLTALTLPGVWAMAATTNVSLAMVSSVFVRCMLFVPIWGWLDLRREATLGELPLAKLFKVWRVLATVAVLFYGSILRLLTMFVPQDFPA-HFFARRADLLRRALWKTFPVSCSLCNDPRGLFLLGSLVVAGLAIYALYLIVFVTDCCRIRCHRECESVLTSFCVGKGIYQPNRHPDEIRSSLSAPDPDETFLPSRPMMLRPDEDQLATNSGVMADKVLPVFAYLDREKEIMKQTGVTEWMKYRSEQIPAHTEEEKEERDRKALLSWAKALQPEDEKLSIEDYFQTVEDDEYFYDPTTGNWLFVE--GPEGQKGDKDKGNENTQNGIDLQAEDE--LEIPPEWEPIVQRMLDRNNGEGEDESADSRDDEDAGSASASVYV 541
            GPPP+PDSIK+LD  E  RRQ   P P LPP   +++ ++YP ++K+ + M REM+ DDYD  D+RV SWAY+ LRP A+G PL +LI  +TA++ VKL+QY+++ + + +L + LV+ DT  T  L    P  LLSWA  +A FNDVRTDGVRRSV MFCLTAL LP VWAM+ATTNV+L +  ++FVR ML   IWGW+DLRREA LG+  LA+++K WR   TV VL +GS+LR +    P + P    F R A+ LR+AL K FPV+CSLCNDPRGLFL G L +  L  Y LYL VFVT+  +I CHR CES LTS  V KGIYQPNRHPDE + SLSAPDP  +F PS  MMLRP +D  ++    ++   +PVFAYL +E+E+MK TG+TEW+K RSEQ+PA+ +E + ERD  ALLSWA+ L+PE+E+LSI+DY QTVEDDEY YDPTTGNW+F +     G++ D      +     +L  E++  +EIPPEWEP+V+RML++N     +   D + D+D+ S   S++ 
Sbjct:    3 GPPPIPDSIKRLDEFELERRQKPMPNP-LPPHFFESLFDQYPSVRKVHEAMTREMASDDYDPEDYRVYSWAYQQLRPTAIGLPLLSLIVGTTAFAIVKLIQYIRANLEKQILANMLVTADTVATGVLTGFIPVILLSWAWQKAHFNDVRTDGVRRSVTMFCLTALALPAVWAMSATTNVTLGIACALFVRFMLAFSIWGWVDLRREAFLGDALLARVYKAWRSCLTVGVLIFGSLLRSMAFLAPHEVPVKEVFGRHANSLRQALGKRFPVACSLCNDPRGLFLAGGLAIIALVSYVLYLAVFVTEFYQINCHRRCESPLTSLFVKKGIYQPNRHPDESKGSLSAPDPSMSFHPSPAMMLRPTKDWDSSTVQPLSGTNMPVFAYLKKEEEVMKTTGLTEWLKPRSEQVPAYDDESRMERDLDALLSWARPLKPEEEELSIDDYVQTVEDDEYMYDPTTGNWIFTDDLAESGKRKDGMDDRSDKMQPFELNGEEDEMVEIPPEWEPLVKRMLEKNAEHPFENQDDQQVDDDSDSPPVSIFA 540

The following BLAST results are available for this feature:

BLAST of Gvermi12172.t1 vs. uniprot

BLAST of Gvermi12172.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5U7_9FLOR	3.950e-188	52.88	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..541
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 287..309
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 182..186
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 310..541
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 209..227
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 187..208
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..117
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 251..286
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 144..163
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 164..181
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 118..143
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 228..250
None	No IPR available	TMHMM	TMhelix		coord: 128..147
None	No IPR available	TMHMM	TMhelix		coord: 186..208
None	No IPR available	TMHMM	TMhelix		coord: 287..309
None	No IPR available	TMHMM	TMhelix		coord: 228..250
None	No IPR available	TMHMM	TMhelix		coord: 160..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:3659692..3661317 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12172.t1	Gvermi12172.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 3659692..3661317 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12172.t1 ID=Gvermi12172.t1|Name=Gvermi12172.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=542bp
MDFASRVGPPPVPDSIKQLDMLEFHRRQAAEPMPSLPPEVLQAIRERYPR
IKKLDQVMEREMSRDDYDINDHRVCSWAYEYLRPWAMGRPLQALIACSTA
YSTVKLVQYVKSRVSQTVLMSALVSVDTFFTVALGAVFPAFLLSWALHRA
RFNDVRTDGVRRSVFMFCLTALTLPGVWAMAATTNVSLAMVSSVFVRCML
FVPIWGWLDLRREATLGELPLAKLFKVWRVLATVAVLFYGSILRLLTMFV
PQDFPAHFFARRADLLRRALWKTFPVSCSLCNDPRGLFLLGSLVVAGLAI
YALYLIVFVTDCCRIRCHRECESVLTSFCVGKGIYQPNRHPDEIRSSLSA
PDPDETFLPSRPMMLRPDEDQLATNSGVMADKVLPVFAYLDREKEIMKQT
GVTEWMKYRSEQIPAHTEEEKEERDRKALLSWAKALQPEDEKLSIEDYFQ
TVEDDEYFYDPTTGNWLFVEGPEGQKGDKDKGNENTQNGIDLQAEDELEI
PPEWEPIVQRMLDRNNGEGEDESADSRDDEDAGSASASVYV*