Gvermi12446.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12446.t1
Unique NameGvermi12446.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length253
Homology
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BLAST of Gvermi12446.t1 vs. uniprot
Match: A0A2V3IIZ2_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIZ2_9FLOR)

HSP 1 Score: 92.0 bits (227), Expect = 3.500e-18
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0 
Query:  173 VSAEQRCKDKLAQRKLXXXXXXXXXXXXXXXXXRQLENYTRALSEQNRELEILHHKLLTLTCQRSMRSAAAVGDLAARVL 252
            VS EQ+CKDKLAQRKLXXXXXXXXXXXXXXXXXRQLENYTR LSEQNRELEILHHKLLTLTCQRS+R A  +GD++  V+
Sbjct:  250 VSLEQKCKDKLAQRKLXXXXXXXXXXXXXXXXXRQLENYTRTLSEQNRELEILHHKLLTLTCQRSLR-ADQLGDVSGSVM 328
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BLAST of Gvermi12446.t1 vs. uniprot
Match: R7QJF6_CHOCR (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJF6_CHOCR)

HSP 1 Score: 66.6 bits (161), Expect = 3.390e-9
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 0 
Query:  180 KDKLAQRKLXXXXXXXXXXXXXXXXXRQLENYTRALSEQNRELEILHHKLLTLTCQRSMR 239
            KDKLA+RKL        XXXXXXXX RQLENYTR+L+EQNRELE LH +LLTLTC+R MR
Sbjct:  234 KDKLAKRKLRNKESARRXXXXXXXXRRQLENYTRSLTEQNRELENLHDRLLTLTCERRMR 293
The following BLAST results are available for this feature:
BLAST of Gvermi12446.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIZ2_9FLOR3.500e-1883.75BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QJF6_CHOCR3.390e-971.67BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 208..228
NoneNo IPR availableCDDcd14686bZIPcoord: 184..223
e-value: 4.17256E-9
score: 49.4661
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 180..224
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 186..200
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 180..223
score: 8.909835

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4837310..4838068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12446.t1Gvermi12446.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4837310..4838068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12446.t1 ID=Gvermi12446.t1|Name=Gvermi12446.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=253bp
MDLSLLDVLPPSPLFDERVDDVLSANAPFILDPFTATPPLGDDCAMAPPR
THLLLDPFDSPPMPLAASAAPLSPSACAHPFIAAADAAAMCAPMPTSPSL
QQENLPANTGAAPLLRPLAASPSAAHAAAAAHGGAAAAAGAAAAGALGAC
NGNAPAPAPPPAPSLAGAAAAAVSAEQRCKDKLAQRKLRNKESARRYREK
QVARRRQLENYTRALSEQNRELEILHHKLLTLTCQRSMRSAAAVGDLAAR
VL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP