Gvermi12488.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12488.t1
Unique NameGvermi12488.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length123
Homology
[Close]
BLAST of Gvermi12488.t1 vs. uniprot
Match: A0A2V3INW9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INW9_9FLOR)

HSP 1 Score: 54.3 bits (129), Expect = 5.980e-7
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:    1 MPTTQPTGYLYESQPVNPDALEDEVLYDQAVAEELDEQDYVALDNPAEPL 50
            M TTQP GY++  QPVN DAL+DE  YD  V +E+D+ +YV LDN   P+
Sbjct:   63 MSTTQPVGYVFAPQPVNSDALDDEEGYDDPVIDEMDDSEYVDLDNIEGPM 112
The following BLAST results are available for this feature:
BLAST of Gvermi12488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INW9_9FLOR5.980e-754.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5371013..5371381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12488.t1Gvermi12488.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5371013..5371381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12488.t1 ID=Gvermi12488.t1|Name=Gvermi12488.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=123bp
MPTTQPTGYLYESQPVNPDALEDEVLYDQAVAEELDEQDYVALDNPAEPL
VTVPAAEQADGPQASEPSPSNVASASSGGGGADLAGMRAFLIEAGFPPAL
VNGQSRAGLLQLLRDRMNARAP*
back to top