Gvermi12514.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12514.t1
Unique NameGvermi12514.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length538
Homology
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A2V3IGB8_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB8_9FLOR)

HSP 1 Score: 673 bits (1736), Expect = 5.130e-238
Identity = 338/524 (64.50%), Postives = 401/524 (76.53%), Query Frame = 0
Query:   11 LLLQLIFPLHAAAAQHTAHIVIAGAGTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPALNRSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSPPRQRLRYAQAYVDAAVRSGLRRSSHHLDGEMRAVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQLQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGSSFVPFWPDVPEVYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQYQ 534
            LLL  I P+ A      + I+I GAGTAGCPLAARLC ALP+  ITLLERA+PRS  AEF+VRAPR LFSTW +PELLETF SL NPALNRSH VLTG TLGGTSAITG+QW+VPL GSIE+W I GL T  A  YF+RAYDQLSVS P   L YA  Y++AAVR+G  RS+ HLD   R+VW N LTID   RRTD+CSAY+ PLL G C HNL L+QNVTV+ +  SR   G  LQA GV A+QT   N +   TF AR ETIL+AGPYGS KILQLSGIGP +VL+ ANVS  ++LPVG  T+C +S  +SS YTGVPNEP NNF+LV DP+QR RWERGE SVL T VSAANGR G DGYFGSSF+P+WP +PEV S+CH N +SRGF+ IRD+NPFSPP VQNNL+GT  + +R+ RCL  L+ +H  FP  FNM+FTKPE G+++EDW+R  +NTGAHFV  CPVG+V+   L VRGV  LRVIDSS LR++P SAGP+AS+VM+AE+M+D ISK+Y+
Sbjct:    8 LLLYFIAPVLA----QDSDILIVGAGTAGCPLAARLCTALPNLTITLLERASPRSPDAEFYVRAPRKLFSTWVSPELLETFESLPNPALNRSHTVLTGATLGGTSAITGLQWTVPLPGSIENWGIEGLTTESARAYFERAYDQLSVSVPASPLLYASDYINAAVRAGFSRSADHLDSIERSVWQNRLTIDSQFRRTDSCSAYVLPLLGGRCAHNLRLIQNVTVSKLLLSRS--GPSLQAHGVEAMQTSDRNRTQSLTFRARRETILAAGPYGSPKILQLSGIGPQEVLKEANVSCLLDLPVGAKTVCRTSGSISSRYTGVPNEPSNNFSLVEDPEQRARWERGEPSVLRTPVSAANGRAGRDGYFGSSFIPYWPGIPEVRSFCHSNVESRGFIRIRDSNPFSPPFVQNNLLGTKQDMDRMDRCLRSLMRVHESFPKRFNMTFTKPEQGKLTEDWIRSTINTGAHFVSGCPVGEVLTERLEVRGVNGLRVIDSSSLREMPISAGPLASIVMLAEYMADTISKEYK 525          
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A2V3IQS5_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS5_9FLOR)

HSP 1 Score: 491 bits (1264), Expect = 2.510e-166
Identity = 250/511 (48.92%), Postives = 335/511 (65.56%), Query Frame = 0
Query:   24 AQHTAHIVIAGAGTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPALN-RSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSPPRQRLRYAQAYVDAAVRSGLRRSSHHLDGEMRAVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQLQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGSSFVPFWPDVPEVYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQY 533
            AQ     ++ G GT+GC +AARLC A P+  +TLLER  PRS Q+ F V APRNLF++WS   + E F SL +  L  R+   LTG TLGG+SAI GMQW+VP++GS+E+W I GL T  AA Y++RAYD +   PP+  L+YA  YV AA+ +G   S   +    R+VW N L +D N RR DACSAY+ P L+ +C  NL +VQ VT T +  S    GG++ A  V  + +  + S+V R + AR E ++++GPYGS K+LQLSGIG A  L AA V   + LPVG+ ++  +S GV S YTGVP+EP NN   VN  QQR+ W+ G   +LGT V+AANGR G DGYF   F+PF+P  PE+ + C+ N+ S GF+ IRD+NPFS P++ NNL+    +  R+ RCL     IH  FP  F M+F  P  G  + D+V+R  NTGAH VG CPVGDV+   LRV+GV+SLRV+D+S +R +P+SAGP ASV M+AE+M+D I + +
Sbjct:   25 AQSFTDFLVVGGGTSGCIMAARLCSAFPNLHVTLLERGLPRSPQSNFLVSAPRNLFNSWSDRSITEFFESLPDAGLQGRTTPTLTGITLGGSSAINGMQWTVPMSGSVEEWGIRGLSTETAAPYYRRAYDTVGFGPPQAPLQYADDYVTAALSAGFSSSDDPISQPARSVWQNRLALDANFRRNDACSAYVSPALSSSCARNLAVVQGVTATKIVMSDLSGGGKV-AVAVDTISS-SDRSTVHR-YWARREVLITSGPYGSPKLLQLSGIGSASTLAAAGVVQTLNLPVGERSVTRASAGVESTYTGVPDEPANNVEAVNSAQQREIWDSGNGGLLGTPVTAANGRAGEDGYFTVGFIPFFPGRPELRTGCYHNTNSTGFVRIRDSNPFSTPLLNNNLLSDSEDVQRLVRCLNAAAEIHRKFPASFQMTFRSPAGGVATADYVKRTANTGAHIVGGCPVGDVLTDELRVKGVESLRVVDASSIRTMPKSAGPAASVYMLAEYMADRIIEDH 532          
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A2V3J0J7_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0J7_9FLOR)

HSP 1 Score: 484 bits (1247), Expect = 1.430e-163
Identity = 251/504 (49.80%), Postives = 332/504 (65.87%), Query Frame = 0
Query:   31 VIAGAGTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPAL-NRSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSPPRQRLRYAQAYVDAAVRSGLRRSSHHLDGEMRAVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHR-GGQLQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGSSFVPFWPDVPEVYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQ 532
            V+ GAGTAGC LAA+LC ALP+  ITLLER APRS ++EF V APRNLF  WS   + + +PS  +  + NRS  VL G T GG+SAI GMQW+VPL GS+E WRI+GL T  A+ ++QRAY  +    P+  L+YA  Y+ AAVR+G  +S++      RAVW N L ID   RR+D+CSAY++P++N  C  NL LV + T + + F R    GG+L+A GV  L T   N  + R+F AR   +LSAGPY SA +LQLSG+GP  VL AAN+S  +ELPVGQ  +  +S  V+S YTGV +EP NN TLVN   +R R+E G   +L T VSAANGRVG DGYFG+ FVPF+P   E  + C  N ++   +     +PF  P V+ NL+    E  ++  CL+Q++ IH   PP FN + T+P  G ++E +VR   NTGAHFVG C V DVVDG L V  V  L+V+D+SV+R++P+SAGP ASV M+AEFM++ +S +
Sbjct:   37 VVVGAGTAGCALAAKLCSALPNHHITLLERGAPRSDESEFLVEAPRNLFPLWSDRNVTQAYPSEPDEGIQNRSTTVLAGTTAGGSSAINGMQWTVPLPGSVEQWRINGLTTRSASSFYQRAYQTVEFDEPKFPLQYADDYIRAAVRAGFPQSTNPFVQPDRAVWQNRLAIDGTFRRSDSCSAYLKPVMNSVCARNLQLVLSQTASRILFERSGEDGGRLKAVGVQTLDTFSPN--ITRSFYARRNVVLSAGPYESAHLLQLSGVGPKSVLDAANISQILELPVGQTCVSRASASVASRYTGVRDEPANNMTLVNSQAERDRFETGRGGILATPVSAANGRVGGDGYFGAGFVPFFPGPREFRTQCFHNGRTLASVTTVSDDPFDTPKVKLNLLANDNEVGQLVSCLQQVLDIHRALPPEFNATVTEPVGGVVTEAYVRETANTGAHFVGCCAVDDVVDGDLNVLRVDGLKVVDASVIREMPKSAGPAASVYMIAEFMAERMSSE 538          
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A2V3IQR9_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR9_9FLOR)

HSP 1 Score: 455 bits (1170), Expect = 4.200e-152
Identity = 232/522 (44.44%), Postives = 335/522 (64.18%), Query Frame = 0
Query:   19 LHAAAAQHTAHIVIAGAGTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPALN-RSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSPPRQRLRYAQAYVDAAVRSGLRRSSHHLD-GEMRAVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQ----LQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGSSFVPFWPDVPEVYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQYQ 534
            +H   AQ T  +++ G GTAGC LA++LCVA P+  IT+LER  PRS Q++F V APR LF       + E   SL +  +N R+   LTG TLGG++ I GMQW++PL G+IE W +  L TA A  YF+R Y+++   PP+  L+YA  YV A V++G   +++  D   +R++W   L+ID N RR DA SAY++PLL+ +C  N+ +VQ  T + + F++          ++ATGV  + +  +    QR + AR E +++AGPY S K+LQLSG+G   VL AA V+  +ELPVG+ T+  +S  + S Y+GVP+E  NN TLVN P+ R++WE G   +L T VSAANGR G D YFG + VPF P  PE+ S C+ N+++ G++ IRD+NPFS P+++NN + +  + NR++RCLE +  +H  FP  F M F  P +G ++E +VR     GAHFVG C +GDVV G  +V+G   LRVID+S +  +P SAGPMASV ++AE M D + ++Y+
Sbjct:   14 IHLTCAQFTDFLIVGG-GTAGCVLASKLCVAFPNAHITILERGLPRSPQSDFLVHAPRKLFDVLGDRSVGEAITSLPDAGINGRTTVALTGATLGGSTTINGMQWTLPLPGTIEQWGVPNLTTASADPYFRRIYNKVGFGPPQNPLQYADDYVSAGVQAGFELNNNPFDTSTLRSIWQTRLSIDSNFRRNDAYSAYLRPLLDNSCAKNVAVVQGATASKIVFTQSTDSNTGATTVRATGVDTVPSPGSTHKAQR-YWARREVLVTAGPYNSPKLLQLSGVGTRAVLDAAGVAQVLELPVGEATVGRASGTIPSTYSGVPDEAANNITLVNSPEARQQWEAGLGGILSTPVSAANGRAGTDAYFGCTIVPFVPGPPELRSACYHNTETTGYLRIRDSNPFSAPLLKNNFLSSQADVNRLKRCLENMADVHRQFPASFKMRFKYPPNGVVTEGYVRSVAQWGAHFVGGCAIGDVVTGEFKVKGCSGLRVIDASSIPTMPVSAGPMASVYLLAELMGDRLVEEYK 533          
BLAST of Gvermi12514.t1 vs. uniprot
Match: R7QGX9_CHOCR (GMC_OxRdtase_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX9_CHOCR)

HSP 1 Score: 378 bits (970), Expect = 2.140e-120
Identity = 224/519 (43.16%), Postives = 309/519 (59.54%), Query Frame = 0
Query:   30 IVIAGAGTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPAL-NRSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSP--PRQRLRYAQAYVDAAVRSGLRRSSHHLDGEMRAV--WHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQLQATGVHALQTLPNNSSVQRT-----FVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGS--SFVPFWPDVPEVYSYCHLN-SQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQYQE 535
            ++I GAGT+GC LAARLCVALP + ITLLERA+PR++ A+F VR+PR ++  W +  ++E   +L +  L  R+  V TG TLGGTSAI GMQW VP +GS++ W I  L T  A +Y+QRA+  +  +   P  R R+  A++ AA R+G    +        A   + N + ID    R D+C+AY+ P+LN  C HNL LVQ  +VT +  SR  R    +ATGV    T+  +S+ +R        A  E I++AGP+GS K+LQLSGIGP DVL+ A + VRV LPVG +T+      + S     P EP NN TL+ND  QR  W+ G  SVLG +   ANGR  AD Y     SF P   D   V + C+ N + SRGF+ +   N  +P  VQ  L+    ++ R++RCL +L  +H   P  F   +  P  GQI+E W+R       H VG C VG+V+   LRV+GV+ LRV+DSS LR++P+SAGPMAS  M+AEFM++ I K+ ++
Sbjct:  146 LLIIGAGTSGCALAARLCVALPTRNITLLERASPRNSAADFLVRSPRQMWLAWQSSSVVEPIRTLPSSGLLGRAVPVFTGATLGGTSAINGMQWVVPRDGSVDTWGIRNLTTNSARRYYQRAFRTIGFAAQIPPLRQRHVDAFLGAARRAGYDTGNKDPFDPSEAFDFFENRMAIDLAGVRRDSCTAYLSPVLNTKCAHNLRLVQGASVTRLLLSRESRP---RATGVE--YTVSGSSAGERRTRKLRVAAGGELIVTAGPFGSPKLLQLSGIGPRDVLQKAGIPVRVGLPVGTHTVARPFAALDSEIQA-PLEPSNNSTLLNDTAQRTLWDAGRGSVLGRSSFIANGRDRADAYLTGTGSFFPALVDRSIVSTNCNSNVALSRGFVRVTTRNASAPLDVQMALLQKRADFLRMQRCLLRLRRLHEELPRRFTAKWANPSDGQITERWIRDNAGWAGHMVGGCAVGEVLTDGLRVKGVRGLRVVDSSSLRNMPESAGPMASTYMLAEFMAEVIGKEIKD 658          
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A515J4W6_NEOYE (Choline dehydrogenase n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=A0A515J4W6_NEOYE)

HSP 1 Score: 366 bits (939), Expect = 6.040e-117
Identity = 221/523 (42.26%), Postives = 290/523 (55.45%), Query Frame = 0
Query:   38 AGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPALNRSH-DVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSPPRQRLRYAQAYVDAAVRSGLRRSSHHLDGEM-----RAVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFS-----------------RRHRGGQLQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRV--GADGYFGSSFVP-FWPDVPEVYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQYQ 534
            AGC LAARLC ALP +++ LLER   R+A  EF VR+PR   + W+ P LLETFPS    AL R    + TG TLGG SA+   QWSVPL G+++ W I GL    A +YF+RA  QL V+ PR  LR  QAYVD  + +  R     +D  +     R  W + LT+DR  RR DAC+AY+ P L G C  NL + Q VTVT V +                  RR RG ++   GV  + +   ++   RT  AR   I +AG  GS K+LQLSGIG    LR A V+ RV+LPVG+       +GV S Y GVP    NN ++V  P  R+RWE G   VLG A  A   RV  GA GY  +SF P   P  P   +YC  N  S G + + DA+PFS P+V+   +G   E   +  CL ++ ++   FPP F M  T P  G++ E +VR       H VG C VG VVDG  RV+G ++L V+DSS +  +P SAG MASV M+AEF ++ + + ++
Sbjct:   47 AGCALAARLCAALPARRVVLLERGGRRNATEEFLVRSPRQAVAAWAVPSLLETFPSAPERALGRRRVQLATGATLGGGSAVNIGQWSVPLAGTVDGWGIPGLGDTAARRYFRRAARQLRVAVPRGGLR--QAYVDDWLAAAARAGVPSVDDTVWPPPNRGSWVHRLTVDRAGRRRDACTAYVAPALKGVCAANLRVHQGVTVTKVLWEDDDGARAAGPTTAADGRRRRRGTRV--AGVAYVASADGDAGRVRTLRARQAVISAAGAVGSPKLLQLSGIGRRRALRRAGVTPRVDLPVGERFQTRPFLGVVSEYAGVPLAAGNNASVVAAPATRRRWEAGRGGVLGVAAHAGLLRVPDGAGGYVTASFTPDAVPGEPVFGAYCMTNPSSTGRLTLADASPFSAPVVETRSLGEGHEVATLLACLRRMAAVAAAFPPAFRMRQTVPRRGRLDEAYVRASSEVSGHLVGGCQVGAVVDGGFRVKGFRNLYVVDSSAIPSIPLSAGTMASVYMLAEFAAEKLIRVFR 565          
BLAST of Gvermi12514.t1 vs. uniprot
Match: R7QK16_CHOCR (GMC_OxRdtase_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK16_CHOCR)

HSP 1 Score: 362 bits (928), Expect = 2.170e-115
Identity = 207/510 (40.59%), Postives = 292/510 (57.25%), Query Frame = 0
Query:   31 VIAGAGTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPAL-NRSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSPPRQRLR--YAQAYVDAAVRSGLRRSSHHLDGEMR-AVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQLQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSS-VYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGSSFVPFWPDVPE--VYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQY 533
            VI G GTAGC +AARLC  +    + +LER  PRS Q+E  +RA RN+  TW  P L +TF S  +P++  +  +++   TLGG S+I  MQW +PL      W I GL + +A ++++RAY ++  +   Q LR  Y   Y DAA R+   R        +R AVW   + +  + RR D+C+AY++P+LNG C+ NL L+Q  TVT V           +A GV  + +     + +   +A  E ILSAGP+GS K+LQLSGIGP   L+AANV  RV+LPVGQ T   +   VSS  Y G P EP NN T++N P+  + W R + SVLG+   A    +   GY   S       + E  + S+C  N  S G++ I D +PFS P V  N +G+  + NR+R CLE+ V +H + P  F +  T P     ++  +R++ +   HFVG C VG VV   L V+GV+ LRV+DSSV R +P SAGPMAS  M+AEF++D ++K Y
Sbjct:   47 VIVGGGTAGCTIAARLCSRVQTASVVVLERGVPRSPQSELLMRAARNIGRTWEDPNLSQTFQSEPDPSMAGQRQEIIDANTLGGASSINAMQWGIPLGNKEGRWGIRGLSSRVAKRFYRRAYRKVGFAQQPQSLRQLYGDEYADAASRTRFTREFSPFKTSLREAVWEMAVAVTPSGRRIDSCTAYLKPVLNGRCRRNLRLIQGTTVTRVLLDN---STVPRAIGVEYVDSKDTRLTNKNVLLASKEVILSAGPFGSPKLLQLSGIGPRSHLQAANVETRVDLPVGQRTQSRALGFVSSQYYKGQPLEPSNNSTILNGPETLRSWRRRQPSVLGSTGFATMAVLKDIGYVPMSTANDATTLDERILQSFCLTNPTSYGYLRILDGDPFSTPKVLLNALGSRTDVNRMRTCLERFVRVHRNLPASFQLETTCPA-PDFNDTQLRQRTSFSLHFVGGCRVGAVVRSDLSVKGVEGLRVVDSSVFRSMPVSAGPMASTYMLAEFVADKLAKMY 552          
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A2V3IL82_9FLOR (Pyranose dehydrogenase 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL82_9FLOR)

HSP 1 Score: 343 bits (881), Expect = 6.180e-108
Identity = 203/517 (39.26%), Postives = 291/517 (56.29%), Query Frame = 0
Query:   27 TAHIVIAGAGTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPALNRSHDVLT-GRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSV--SPPRQRLRYAQAYVDAAVRSGLRRSSHHLDGEMR-AVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQLQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGSSFVPFWP-----DVPEVYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQYQ 534
            T+  +I G GT+GC LAARLCVA P   I++LER  P +  A F   A RN+   W  P++ E+F SL N  L+    +LT G  LGG+S+   +Q+ VPL G +    I GL    A + ++R Y ++     PP  +LRYA  Y++A   +G            R A+W+   +ID   RR D+C+AY+   +   C  NL +VQ VTV  V FSR   G  L+ATGV  + +       ++  +AR E +LSAGPYGS K+LQLSGIGP +VL    +    +LPVG +T   ++ G  S YTGVP EP NN T++N    R++WE G   V G++    NG V  D  + ++ + F       D P + S+C  N  SRG++ + D+NPFS P+VQ +L+G   +  RI+RCL  +  +H  FPP F +  T        E+ +R    T  H+VG C VG VV   LRVRGV  LR++D+SVLR +P SAGP+++  +VAE  +  + ++Y+
Sbjct:   61 TSDFIIVGGGTSGCVLAARLCVAFPDASISVLERGKPLNESARFVKDAMRNVIDAWVDPQISESFLSLPNDGLSGRRVLLTTGAVLGGSSSSNAVQFVVPLEGYVRSLGIAGLSPMRAKRLYRRVYRKVGFRPQPPLVKLRYADDYLEAGRNAGFEIEDDPFRNNARLAMWNTRSSIDGGGRRVDSCAAYLNENVRDRCSANLRVVQGVTVIRVLFSRT--GLSLRATGVEYVSSDDKQLQDRKVMLARKEVLLSAGPYGSPKLLQLSGIGPREVLDRVGLKTVRDLPVGVSTQSRAASGHFSAYTGVPLEPANNSTVLNSTDARQQWENGLGGVYGSSPFPMNGVV-KDICYLTNVLAFGGLLEGLDEPLLASFCLGNPTSRGYICLNDSNPFSSPLVQLDLLGNREDLLRIQRCLRLVQKVHRSFPPQFKL--TDLSQTSADEEEIRNTALTPFHYVGGCAVGSVVRSDLRVRGVYGLRIVDASVLRHIPTSAGPLSTTYVVAEHAAGDLIRRYR 572          
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A2V3IEF3_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEF3_9FLOR)

HSP 1 Score: 337 bits (864), Expect = 3.600e-107
Identity = 195/464 (42.03%), Postives = 271/464 (58.41%), Query Frame = 0
Query:   78 LFSTWSAPELLETFPSLVNPALN-RSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVSPPRQRLR--YAQAYVDAAVRSGLRRSSHHLD-GEMRAVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQLQATGVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRVGADGYFGSSFVPFWPDVPEVY------SYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISK 531
            LFS W   +L   F SL NP LN RS  V TG TLGGTS+I GMQ+S+P+  ++E W I GL TA + ++FQR  DQ+ V+ P   LR  Y + Y++AA ++G   S    D    R++  N LT+D N  R D+C+AY+ P +   CK NL LVQ+ TVT +  S+       +A GV  + +     S  +  +AR E I+ AGP+GS K+LQ+SGIGPA VLR A V VRV LPVG+     +   V   YTG P EP  N TLVN  ++ ++++ G   +LG   S A G+   +G+  ++   F    P V+      + C  N +S G+  IRD NPFS P VQ  L+    +  R+ +CL+ +     +F P F  S   P  G+I+E+WVRR      HFVG CPVGDV+ G L VR ++ LRV+D+S LR +P SAGPM SV M+AE+M++ I++
Sbjct:    2 LFS-WFMEDLTYGFSSLPNPVLNNRSFRVFTGNTLGGTSSINGMQFSIPIKRTVEKWGIEGLTTASSKKFFQRVIDQIGVAVPEGNLRHKYVRNYINAARKAGFSESVDLWDDSNSRSISENRLTVDPNGFRRDSCTAYLSPTIKDKCKTNLRLVQDATVTRILLSKSR---PQRAFGVDYVHSNDTQMSYPKRILARKEVIVCAGPFGSPKLLQVSGIGPAHVLRKAGVKVRVALPVGRRCQAKTVTPVDMKYTGAPLEPSMNSTLVNSEEELRKFKSGRGGLLGITPSFATGKDNRNGFISANGHTF----PTVFDRNALGAACSNNVRSFGYYQIRDKNPFSTPDVQLALLTNQDDLRRVIKCLKGVKDTFQNFAPLFKSSIENPVGGEITEEWVRRTAVWNGHFVGGCPVGDVLRGDLTVRKMRQLRVVDASSLRRMPLSAGPMGSVYMIAEYMAEVIAR 457          
BLAST of Gvermi12514.t1 vs. uniprot
Match: A0A1X6NKG3_PORUM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKG3_PORUM)

HSP 1 Score: 339 bits (869), Expect = 2.240e-105
Identity = 218/520 (41.92%), Postives = 281/520 (54.04%), Query Frame = 0
Query:   36 GTAGCPLAARLCVALPHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPALN-RSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRAYDQLSVS--PPRQRLRYAQAYVDAAVRSGLRRSSHHLDGEM--RAVWHNFLTIDRNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSV----RFSRRHRGGQLQ--ATGVHALQTLPN---NSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRAANVSVRVELP-VGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRWERGESSVLGTAVSAANGRV--GADGYFGSSFVPFWPDVP---EVYSYCHLNSQSRGFMAIRDANPFSPPIVQNNLMGT-PGEYNRIRRCLEQLVSIHNHFPPHFNMSFTKPEHGQ-ISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVIDSSVLRDLPQSAGPMASVVMVAEFMSDAISKQY 533
            GTAGC LAARLC ALP  ++ LLER APR+   EF VRA R   +TW  P L E   S     L  R+  +L G TLGG+SAI   QW+ P    +  W + GL  + A  Y+ RA   L V+  PP  R  Y + +VDAA  +GL R      G    R  W + + +D   RR DAC+ Y+ P L GAC  NL LVQ VTVT V    R  RRH GG+ Q  A GV  + +       ++   T  AR   I +AGPYGS K+L LSGIGP   LRAA V+  V LP VG           ++ Y+GVP  P NN TL+ DP   ++W  G   VLG A +AA GR   G   Y  + F P W   P   E  S C  N  + G + +  A+PF+ P+VQ NL+G    E + +  CL +L +I   FPP + M   +P   + I E  VR    +G H VG C VG V+DG LRVRGV  L V+D+S +  +  SAGPMASV M+AE+ +D ++ +Y
Sbjct:  136 GTAGCTLAARLCTALPRARVVLLERGAPRNGTEEFLVRAARLTTATWPEPTLSEIILSAPARGLGGRTVRLLAGTTLGGSSAINFGQWTTPPAAEVAAWGVTGLTASTAGAYYARAAAALGVAVPPPPLRQVYTEEWVDAAGAAGLPRVDEAAPGPTPRRGAWIHRIAVDPAGRRVDACAGYVAPALAGACADNLELVQGVTVTKVLLETRRGRRHGGGRHQPVAVGVQYVASADRAAGRAAATTTLRARRAVISAAGPYGSPKLLLLSGIGPPAALRAAGVTPTVTLPAVGARMQTRPFAQATATYSGVPLAPANNATLLADPATVEQWRAGRGGVLGVAAAAALGRQTDGLGTYIEAMFTP-WRSAPGRREYVSTCLSNPSATGRLTLDGADPFAQPVVQTNLLGGGAAEVSTVVACLRRLRAITRSFPPAWGMREVEPPASRRIDEALVRATTVSGQHMVGGCAVGAVLDGRLRVRGVARLHVVDASAIPSMTSSAGPMASVYMLAEWAADRLAARY 654          
The following BLAST results are available for this feature:
BLAST of Gvermi12514.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGB8_9FLOR5.130e-23864.50Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3IQS5_9FLOR2.510e-16648.92Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3J0J7_9FLOR1.430e-16349.80Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3IQR9_9FLOR4.200e-15244.44Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
R7QGX9_CHOCR2.140e-12043.16GMC_OxRdtase_N domain-containing protein n=1 Tax=C... [more]
A0A515J4W6_NEOYE6.040e-11742.26Choline dehydrogenase n=1 Tax=Neopyropia yezoensis... [more]
R7QK16_CHOCR2.170e-11540.59GMC_OxRdtase_N domain-containing protein n=1 Tax=C... [more]
A0A2V3IL82_9FLOR6.180e-10839.26Pyranose dehydrogenase 3 n=1 Tax=Gracilariopsis ch... [more]
A0A2V3IEF3_9FLOR3.600e-10742.03Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A1X6NKG3_PORUM2.240e-10541.92GMC_OxRdtase_N domain-containing protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.410.40coord: 159..472
e-value: 1.3E-70
score: 241.0
NoneNo IPR availablePANTHERPTHR11552:SF147CHOLINE DEHYDROGENASE, MITOCHONDRIALcoord: 29..532
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..537
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 389..477
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 30..527
e-value: 1.3E-70
score: 241.0
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 24..533
IPR007867Glucose-methanol-choline oxidoreductase, C-terminalPFAMPF05199GMC_oxred_Ccoord: 398..523
e-value: 2.5E-17
score: 63.7
IPR000172Glucose-methanol-choline oxidoreductase, N-terminalPFAMPF00732GMC_oxred_Ncoord: 30..315
e-value: 1.6E-30
score: 106.5
IPR012132Glucose-methanol-choline oxidoreductasePIRSFPIRSF000137Alcohol_oxidasecoord: 381..536
e-value: 1.1E-20
score: 71.8
coord: 9..357
e-value: 2.2E-39
score: 133.6
IPR012132Glucose-methanol-choline oxidoreductasePANTHERPTHR11552GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASEcoord: 29..532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:6000093..6001706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12514.t1Gvermi12514.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 6000093..6001706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12514.t1 ID=Gvermi12514.t1|Name=Gvermi12514.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=538bp
MRAHLLMFCVLLLQLIFPLHAAAAQHTAHIVIAGAGTAGCPLAARLCVAL
PHKKITLLERAAPRSAQAEFFVRAPRNLFSTWSAPELLETFPSLVNPALN
RSHDVLTGRTLGGTSAITGMQWSVPLNGSIEDWRIHGLDTAIAAQYFQRA
YDQLSVSPPRQRLRYAQAYVDAAVRSGLRRSSHHLDGEMRAVWHNFLTID
RNLRRTDACSAYIQPLLNGACKHNLHLVQNVTVTSVRFSRRHRGGQLQAT
GVHALQTLPNNSSVQRTFVARDETILSAGPYGSAKILQLSGIGPADVLRA
ANVSVRVELPVGQNTLCSSSIGVSSVYTGVPNEPVNNFTLVNDPQQRKRW
ERGESSVLGTAVSAANGRVGADGYFGSSFVPFWPDVPEVYSYCHLNSQSR
GFMAIRDANPFSPPIVQNNLMGTPGEYNRIRRCLEQLVSIHNHFPPHFNM
SFTKPEHGQISEDWVRRQLNTGAHFVGACPVGDVVDGHLRVRGVQSLRVI
DSSVLRDLPQSAGPMASVVMVAEFMSDAISKQYQEPC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR007867GMC_OxRtase_C
IPR000172GMC_OxRdtase_N
IPR012132GMC_OxRdtase