Gvermi12293.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12293.t1
Unique Name	Gvermi12293.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	421

Homology

[Close]

BLAST of Gvermi12293.t1 vs. uniprot
Match: A0A2V3IMR2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR2_9FLOR)

HSP 1 Score: 416 bits (1070), Expect = 2.380e-140
Identity = 260/442 (58.82%), Postives = 311/442 (70.36%), Query Frame = 0

Query:    1 MSTASLPTKYWQGTALSASDRRRQWLVNHGLLSPKPSASRRLP--NLFTKRTSSSSASTPSLHDSFVHLHVDQNAVPIVVAHRQN-HPAH-TSDAAARTLSLPIEDSAHMPMTRFKRAPSSKWFSRNS--------THTRYSS-----RSSRIRAWLGSHKHRHHPSNSHTSNQ-RPQSLPFLRRSASLTS-SELDIDRVNQPPDRQVVSNRPTSSTLPSSLSPTCATHTNFTKSATN----PRSRRRTVYKVVDQHIPRRVLKPQAHYEKSSWNAYRSRIDQLAEDEQFMDYLTAPVQRHPSVNIATQTAAANAQQLAVNKLYPLAFIKLLEAQAKM-AEADSPGDPSEEKHRYDDIDGDDEARIERTSSTGLRDMKRFRTISSENRRSRFHSPPNMSGSLEHVRLLKFCSESGSESSHSSFFSRLTQENHASSPAVRFSR 418
            MSTASLPTKYWQ + LS  +RRR+WLVNHGLLSPK S+SRRLP  +LF++R SSS+ S PSLHDSFVHLHVD NAVP+VV    N HP H +S AAARTLSLPI+D+  + +T  +R P   WFSRNS        T T ++S     RSSR+R+W  S K+RH   N HTS + R   +P L RSA   + S  ++ R++QPPDRQV  NRP       S +P+   H +   +A N     R+RRR VYKVVD H+PR VLKPQA YE+SSWN YRSRID+LAED++FMDYLT PVQ H    +    AA++ +QLAVNKLYPLAFIKLLEAQAKM A+     DP EE+HRYDDIDGDDEARIERT+S  L DM RFRT+ S N++   H   N + S+EH+RLL    ESGSESSHSSFFSRLTQENH SSP V +SR
Sbjct:    1 MSTASLPTKYWQPSPLSPGERRRKWLVNHGLLSPKSSSSRRLPKSHLFSRRASSST-SAPSLHDSFVHLHVDDNAVPLVVTRPNNSHPDHISSSAAARTLSLPIQDTDRVHITPLRRLP--PWFSRNSNSSNPNTPTRTNHTSPRSPYRSSRLRSWFSSRKNRH--PNYHTSERHRAHPIPPLSRSAGFEAPSHFELGRLHQPPDRQV-HNRP-------SHAPSHNHHPSSNPAAHNLNAQSRARRRAVYKVVDPHMPRHVLKPQAQYEQSSWNDYRSRIDKLAEDQRFMDYLTEPVQHHHPPKMPRMHAASDPKQLAVNKLYPLAFIKLLEAQAKMNADTAHANDPHEEEHRYDDIDGDDEARIERTTSKALHDMHRFRTVYSPNKKPLRHHAHNFA-SMEHIRLLTPAVESGSESSHSSFFSRLTQENHLSSPFVPYSR 428

The following BLAST results are available for this feature:

BLAST of Gvermi12293.t1 vs. uniprot

BLAST of Gvermi12293.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMR2_9FLOR	2.380e-140	58.82	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..349

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:4118463..4119725 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12293.t1	Gvermi12293.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 4118463..4119725 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12293.t1 ID=Gvermi12293.t1|Name=Gvermi12293.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=421bp
MSTASLPTKYWQGTALSASDRRRQWLVNHGLLSPKPSASRRLPNLFTKRT
SSSSASTPSLHDSFVHLHVDQNAVPIVVAHRQNHPAHTSDAAARTLSLPI
EDSAHMPMTRFKRAPSSKWFSRNSTHTRYSSRSSRIRAWLGSHKHRHHPS
NSHTSNQRPQSLPFLRRSASLTSSELDIDRVNQPPDRQVVSNRPTSSTLP
SSLSPTCATHTNFTKSATNPRSRRRTVYKVVDQHIPRRVLKPQAHYEKSS
WNAYRSRIDQLAEDEQFMDYLTAPVQRHPSVNIATQTAAANAQQLAVNKL
YPLAFIKLLEAQAKMAEADSPGDPSEEKHRYDDIDGDDEARIERTSSTGL
RDMKRFRTISSENRRSRFHSPPNMSGSLEHVRLLKFCSESGSESSHSSFF
SRLTQENHASSPAVRFSRQC*