Gvermi12399.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12399.t1
Unique NameGvermi12399.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length303
Homology
BLAST of Gvermi12399.t1 vs. uniprot
Match: A0A2V3IPX0_9FLOR (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPX0_9FLOR)

HSP 1 Score: 490 bits (1261), Expect = 3.230e-173
Identity = 248/297 (83.50%), Postives = 275/297 (92.59%), Query Frame = 0
Query:    6 EGANVDWGDDPDFPSSGGIPPQEVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRSGATASAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPRDGESRSGFGR 302
            EGANVDWGDD DFPS+GGIPPQEV  N DGTKTVIDYGMS+DGYLSKT+SVIKVEKVTKTVS+AVAARKNW KFGDC GK PGLE+GI+++S+DEI++EW+ N++  XXXXX +N+A+KA+QDIQ+ LKMLRFKKR EE+KLGV NWAQMMSMQASA TPN PP PGLR AESSSGA GKYVPPSKR GA+ +AG+SMYSRDDSATVRISNVSRST+EADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVN+ DAARCIEKL+GFGYDHLILSVEWSKP+EPRDGESRSGFGR
Sbjct:    7 EGANVDWGDDTDFPSTGGIPPQEVTQNPDGTKTVIDYGMSEDGYLSKTTSVIKVEKVTKTVSRAVAARKNWNKFGDCHGKQPGLERGITSISMDEISVEWITNDEXXXXXXXEINYAKKARQDIQSHLKMLRFKKRLEEKKLGVDNWAQMMSMQASANTPNAPPAPGLRQAESSSGAPGKYVPPSKRGGASGTAGESMYSRDDSATVRISNVSRSTQEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNVQDAARCIEKLDGFGYDHLILSVEWSKPREPRDGESRSGFGR 303          
BLAST of Gvermi12399.t1 vs. uniprot
Match: R7Q7Q4_CHOCR (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Q4_CHOCR)

HSP 1 Score: 416 bits (1069), Expect = 6.470e-144
Identity = 218/300 (72.67%), Postives = 247/300 (82.33%), Query Frame = 0
Query:    5 PEGANVDWGDDPDFPSSGGIPPQEVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRSGA-TASAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPRDGES-RSGFGR 302
            P G   DWG+D D+P SGGIPPQEV  N DGTKTVIDYGMS+DGYLSKT +V+KVEKV+KTVSKAVAARK WAKFGD  GK  GLEKGI+TVSIDEIN+EW+ NE          +FA+ A +DIQ++LKM RF++RQEERK+GVANWAQ+MS++A+AK PN  P PGLR    S+G G KYVPPSKR GA  A+ G+SMYSRDDSATVRISNVSR+TEEADLEELCK FGPIRRIFLSRDRET ESKGFAFVAFVN  DAA CI +L+G+GYDHLILSVEWSKPKEPRDGE+ R  F R
Sbjct:   10 PAGMGGDWGEDVDYPVSGGIPPQEVKQNNDGTKTVIDYGMSEDGYLSKTITVVKVEKVSKTVSKAVAARKKWAKFGDSAGKGAGLEKGITTVSIDEINVEWVDNEDAGEEEEEEADFAEIAARDIQSRLKMERFRRRQEERKMGVANWAQLMSIEAAAKNPNAGPAPGLREG-GSTGGGNKYVPPSKRGGAGAATVGESMYSRDDSATVRISNVSRNTEEADLEELCKNFGPIRRIFLSRDRETRESKGFAFVAFVNSSDAATCIARLDGYGYDHLILSVEWSKPKEPRDGEAPRHSFAR 308          
BLAST of Gvermi12399.t1 vs. uniprot
Match: UPI001E1D6731 (LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit G-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6731)

HSP 1 Score: 347 bits (890), Expect = 1.030e-116
Identity = 174/292 (59.59%), Postives = 220/292 (75.34%), Query Frame = 0
Query:    7 GANVDWGDDPDFPSSGG-IPPQEVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPNEPPPPGLRTAESSSGA-GGKYVPPSKRSGATASAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPRDGES 296
            G   DW D+ D   SG  IPP+EVI   DG KT+ +YGMSD+GYL KT  V+K  ++T++VSK+VAARK+W KFGDC GK  GLE+GISTVS+DEI+MEW+    ++       ++A  A +DIQ  L+M RFK+RQEERK GVANWAQ+M+++A+ + P E P      +  + GA GGKYVPPS+R+GA A+ G+SMY RDDS TVR+SN+S+ T E DLEELC  FG  RRIFLSRDR+T ESKGFAFV F N  DAA+C+EKLNG+GYDHLILSVEWSKP+EPR+G++
Sbjct:   13 GGGADWADEADGIDSGNTIPPREVIDGPDGVKTITEYGMSDEGYLQKTVKVVKFSEITRSVSKSVAARKHWKKFGDCAGKGDGLERGISTVSVDEIHMEWIERATDDADDEEEADYASMAARDIQGNLRMERFKRRQEERKHGVANWAQLMALEAAQRNPGEAPQARADPSSGTGGATGGKYVPPSRRNGAGATMGESMYGRDDSTTVRVSNLSKGTTEPDLEELCMPFGETRRIFLSRDRDTDESKGFAFVTFRNQSDAAKCVEKLNGYGYDHLILSVEWSKPREPREGDA 304          
BLAST of Gvermi12399.t1 vs. uniprot
Match: A0A1X6NPC7_PORUM (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPC7_PORUM)

HSP 1 Score: 282 bits (721), Expect = 4.720e-91
Identity = 153/290 (52.76%), Postives = 195/290 (67.24%), Query Frame = 0
Query:    7 GANVDWGDDPDFPSSGGIPPQEVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRSGATAS--AGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPRDG 294
            G   DWG D  +     +PP+E   + DG K V+++ +++D Y  KT+++ +  K ++ VS+ VA RK+WAKFG+C GK  G E GIS VS++EINMEW+    +          A KA  DIQ +LKM RFK +QEER+ GV NWAQ+MS++A+A++    P  G          GGKYVPPSKR G   +   GDSMY RDDSATVR+SNVS ST EADLEEL   FGPIRR +LSRDR TGES+GFAF+AF  I DA RCI+KL+G+GYDHLIL VEW++PKE   G
Sbjct:   10 GGTADWGADDGYNDDKELPPREEHTDADGVKHVVEWSINEDAYAVKTTTLTRTTKKSRKVSRGVATRKSWAKFGECSGKAAGREYGISAVSLEEINMEWVTPAGDSEEENSDDERA-KADMDIQKRLKMERFKIKQEERRRGVNNWAQLMSLEAAARSGEAGPSLGDGDGXXXXX-GGKYVPPSKRGGGAGADAVGDSMYQRDDSATVRVSNVSPSTTEADLEELFSNFGPIRRTYLSRDRVTGESRGFAFIAFREIADAGRCIDKLDGYGYDHLILRVEWAQPKEGAPG 297          
BLAST of Gvermi12399.t1 vs. uniprot
Match: M2WRH5_GALSU (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WRH5_GALSU)

HSP 1 Score: 265 bits (678), Expect = 7.650e-85
Identity = 143/286 (50.00%), Postives = 197/286 (68.88%), Query Frame = 0
Query:   11 DWGDDPDFPSSGGIPPQEVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPN-EPPPPGLRTAESSSGAGGKYVPPSKRSGATASAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPRDGE 295
            +W D+ DF  S  +PP E  ++E+G K V++Y  +++  L KT+ V +V+K TK VSK+VA R++W KFGDC+  PPG E G++ VS+D++++E+   E++E       +   K Q+DIQ  L M RFK+R EER+ GVANWAQ+M+++A A+    E P     +A +     GKYVPP  R G   S+ DS Y+RDDSATVR+SN+S +T E+DL+EL   FG IRRIF+S+DR TGE KGFAFVAF N  DA +CIEKL+G+GYDHLIL  EW+KP E + G+
Sbjct:   16 EWADEDDF--SNKLPPLEEWYDEEGLKHVVEYHFNEENKLVKTTKVFRVKKETKQVSKSVAERRHWKKFGDCQRAPPGPEPGVTAVSLDDVSIEYKRGEESEGEE----DLKAKEQKDIQKMLAMQRFKRRLEERRAGVANWAQLMALKAGAQRDELEVPSTNANSANT-----GKYVPPHLRGGGRVSS-DSSYTRDDSATVRVSNLSPNTTESDLQELFHPFGNIRRIFISKDRHTGEGKGFAFVAFSNREDARKCIEKLDGYGYDHLILRCEWAKPSENKRGQ 289          
BLAST of Gvermi12399.t1 vs. uniprot
Match: A0A7S1EQI3_9RHOD (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQI3_9RHOD)

HSP 1 Score: 234 bits (597), Expect = 1.480e-72
Identity = 145/296 (48.99%), Postives = 189/296 (63.85%), Query Frame = 0
Query:    6 EGANVDWGDDPDFPSSGGIPPQEVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRSGATASAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPRDGESRSGFG 301
            EGA  +W DD D     G+PP+E I  EDG K VI++ ++++GY  KT++V+K+EK  K VSK VA R NW KFG C GKPPGLEKG+S  S DEI +EW+    + XXXXXX   AQ+ + DI+  L   R ++R  ER  GV  WAQ+M+++A A   +E    G + A SS    GKY+ P+ ++       D  Y+RDDSATVR+SN+   T EADL +L +  G I R FLSRDR TG+SKGFA+VA+ +I DA R I+KL+G GYDHLIL VEW+      D E  S  G
Sbjct:    6 EGAVKNWADDED--DEYGLPPKEEILGEDGLKRVIEWSVNEEGYAVKTTTVVKIEKNVKIVSKGVAERTNWKKFGVCAGKPPGLEKGVSKPSPDEILIEWILPPADXXXXXXXXXEAQR-EIDIRKMLNADRLRQRMSERSAGVQTWAQLMALKAGADK-DEVAADGDKPAASS----GKYISPALKN--REQGADGRYARDDSATVRVSNIPPRTTEADLSDLFRTCGRISRTFLSRDRNTGDSKGFAYVAYESIADAERAIQKLDGHGYDHLILRVEWA------DAERNSNSG 285          
BLAST of Gvermi12399.t1 vs. uniprot
Match: A0A5J4ZAC4_PORPP (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAC4_PORPP)

HSP 1 Score: 225 bits (573), Expect = 1.340e-68
Identity = 130/281 (46.26%), Postives = 174/281 (61.92%), Query Frame = 0
Query:    8 ANVDWGDDPDFPSSGGIPPQEVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRS--GATASAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWS 286
            A  DW DD D      +PP+EV    +G K V+++ ++D  Y  KT+ V++ EK +  V++    R  W KFG C+ +P GLEKGIST+S+DEI ++W+  +  E       + A K + DI+  L   R K+R EER  GV NWAQ+M++ A AK  +  P  G        G G KY+PP +R+     A AG +M  RDDS TVR+SNV   T EADL+EL   FG I+RIFLSRDR TGESKGFA+VA+  I +AA  I++L+G GYDHLIL VEW+
Sbjct:    2 AAEDWADDED--DEFRLPPREVTTEANGLKKVVEWSVNDQHYAVKTTKVVREEKSSIVVTEGEYERMQWKKFGSCKNQPRGLEKGISTMSVDEILIDWVTPKDEEDDESEEEDQA-KRELDIRKMLAADRLKRRMEERNAGVGNWAQLMAVSAGAKVEDLNPGQGAGAG----GKGDKYIPPWQRNREAGAAGAGSAMNERDDSTTVRVSNVPPRTTEADLQELFSPFGRIQRIFLSRDRVTGESKGFAYVAYNLISEAAAAIQRLDGHGYDHLILRVEWA 275          
BLAST of Gvermi12399.t1 vs. uniprot
Match: UPI001E1DF8C6 (eukaryotic translation initiation factor 3 subunit G-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF8C6)

HSP 1 Score: 185 bits (469), Expect = 2.560e-53
Identity = 112/296 (37.84%), Postives = 165/296 (55.74%), Query Frame = 0
Query:   10 VDWGDDPDFPSSGGIPPQ-EVIHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMM-----------SMQASAKTPNEPPPP----GLRTAESSSGAGGKYVPPSKRSGATASAGDSMYS-RDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKP 288
            + W +  +    G +PP  E    ++  KT+ +Y  +DDG + K     KVEK  +  +K +A RKNW KFG  E  PPG     + V ++EINM+ + N++N            K Q+  +  L  L+ +K    R     +W               +++   K P+EP  P          +++  GGKYVPPS R GA    G++M S RD+SAT+R++N+S  T E+DL+EL + FGPI+RI+L++D+ TG+SKGFAF+ F    DAAR I  ++GFGYDHLIL+VEW+KP
Sbjct:   10 ISWAEQVEAGEDGSLPPATEDFDEQNSIKTITEYKYNDDGKMVKVVKTYKVEK--RKAAKTIARRKNWRKFGAAENDPPGPNPANTIVQVEEINMQIILNKEN------------KNQEPEEDPLAKLKTQKLVSCRICKGDHWTTKCPYKDTLAPLQETLEGDKKKPDEPGTPVAAXXXXXXXAANKPGGKYVPPSMRDGAAKGRGETMKSSRDESATIRVTNLSEDTRESDLQELFRPFGPIQRIYLAKDKNTGQSKGFAFINFHRREDAARAIAGVSGFGYDHLILNVEWAKP 291          
BLAST of Gvermi12399.t1 vs. uniprot
Match: C1N1W1_MICPC (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N1W1_MICPC)

HSP 1 Score: 179 bits (455), Expect = 2.910e-51
Identity = 121/293 (41.30%), Postives = 166/293 (56.66%), Query Frame = 0
Query:   12 WGDDPDFPSSG-----GIPPQEVIHNE-DGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQA----SAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRSGATA--SAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPR 292
            WGD  D   S       +P  +V   + +G KT+IDY + +DG   +T   ++V  VTK V+K + ARK WAKFGD +   PG ++ ++ VSI+EI +E   +             A  A     T L + R   ++ +       +  + SM       AK P E   PG     +SSG GG YVPPS R+GA+   S GDSM  R D  +VR+SN+S  T E DL+EL + FGP+ RI+++ +RETGES+GFAFV FVN  DA R I KL+G+GYD+LIL VEW+ P+E R
Sbjct:    7 WGDSADLDGSDDDFDVALPASQVFGPDANGVKTIIDYRIKEDGLKVRTVKKVRVNTVTKKVTKEMLARKKWAKFGDAQRYKPG-DESMTAVSIEEIFLE--RHRTTPKSESEKSGDALAAMAGSNTSLLVCRICGKKGDHWTTKCPYKDLASMNTLGLGDAKPPGEDDGPG----GASSGKGG-YVPPSMRAGASGGQSMGDSMNRRRDENSVRVSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNKDDANRAISKLDGYGYDNLILRVEWAAPREER 291          
BLAST of Gvermi12399.t1 vs. uniprot
Match: K8EVU1_9CHLO (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EVU1_9CHLO)

HSP 1 Score: 179 bits (453), Expect = 6.470e-51
Identity = 108/270 (40.00%), Postives = 159/270 (58.89%), Query Frame = 0
Query:   24 IPPQEV-IHNEDGTKTVIDYGMSDDGYLSKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDEINMEWLANEQNEXXXXXXVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVANWAQMMSMQASAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRSGATASAGDSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGESKGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPR 292
            +PP ++ I    G KTV +Y + +DG   ++   +KV KV+KTV+K +  RKNWA+FGD      G ++ ++ VS++EI +E    +          N   KA    QT L + R   ++ +      +W      +  A   ++PP       + + G  G YVPPS+R+GA+A  GDSM  R +  +VR+SN+S  T E DL+EL + FGP+ RI+++ +RETGES+GFAFV FVN  D  R I++L+GFGYD+LIL VEWS P+E R
Sbjct:   35 LPPTKIEIDPSTGIKTVTEYRVKEDGSKVRSIKRVKVHKVSKTVTKEMLERKNWARFGDAARYKTG-DESMTAVSLEEIFLERARLQPKSELEK--ANDPLKAMASSQTSLLVCRICGKKGD------HWTTKCPYKDLAAMGDKPPGSDGPGGDKAGGGAGGYVPPSRRAGASAGEGDSMNRRREENSVRVSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNRDDGQRAIDRLDGFGYDNLILRVEWSAPREER 295          
The following BLAST results are available for this feature:
BLAST of Gvermi12399.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPX0_9FLOR3.230e-17383.50Eukaryotic translation initiation factor 3 subunit... [more]
R7Q7Q4_CHOCR6.470e-14472.67Eukaryotic translation initiation factor 3 subunit... [more]
UPI001E1D67311.030e-11659.59LOW QUALITY PROTEIN: eukaryotic translation initia... [more]
A0A1X6NPC7_PORUM4.720e-9152.76Eukaryotic translation initiation factor 3 subunit... [more]
M2WRH5_GALSU7.650e-8550.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1EQI3_9RHOD1.480e-7248.99Eukaryotic translation initiation factor 3 subunit... [more]
A0A5J4ZAC4_PORPP1.340e-6846.26Eukaryotic translation initiation factor 3 subunit... [more]
UPI001E1DF8C62.560e-5337.84eukaryotic translation initiation factor 3 subunit... [more]
C1N1W1_MICPC2.910e-5141.30Eukaryotic translation initiation factor 3 subunit... [more]
K8EVU1_9CHLO6.470e-5140.00Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..204
NoneNo IPR availablePANTHERPTHR10352:SF34EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 24..289
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 24..289
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 211..284
e-value: 6.0E-21
score: 85.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 212..276
e-value: 5.5E-18
score: 64.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 210..288
score: 15.562085
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 26..125
e-value: 1.0E-21
score: 77.6
IPR017334Eukaryotic translation initiation factor 3 subunit GPIRSFPIRSF037949Transl_init_eIF-3_RNA-bindcoord: 5..291
e-value: 5.5E-72
score: 240.1
IPR017334Eukaryotic translation initiation factor 3 subunit GHAMAPMF_03006eIF3gcoord: 9..290
score: 25.075899
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 189..302
e-value: 2.3E-25
score: 91.3
IPR034240eIF3G, RNA recognition motifCDDcd12408RRM_eIF3G_likecoord: 211..287
e-value: 1.23949E-40
score: 134.204
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 207..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4558830..4559738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12399.t1Gvermi12399.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4558830..4559738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12399.t1 ID=Gvermi12399.t1|Name=Gvermi12399.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=303bp
MVPEPEGANVDWGDDPDFPSSGGIPPQEVIHNEDGTKTVIDYGMSDDGYL
SKTSSVIKVEKVTKTVSKAVAARKNWAKFGDCEGKPPGLEKGISTVSIDE
INMEWLANEQNEEEEEEEVNFAQKAQQDIQTQLKMLRFKKRQEERKLGVA
NWAQMMSMQASAKTPNEPPPPGLRTAESSSGAGGKYVPPSKRSGATASAG
DSMYSRDDSATVRISNVSRSTEEADLEELCKRFGPIRRIFLSRDRETGES
KGFAFVAFVNIPDAARCIEKLNGFGYDHLILSVEWSKPKEPRDGESRSGF
GR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR024675eIF3g_N
IPR017334eIF3_g
IPR012677Nucleotide-bd_a/b_plait_sf
IPR034240eIF3G_RRM
IPR035979RBD_domain_sf