Gvermi12247.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12247.t1
Unique NameGvermi12247.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length148
Homology
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A2V3J0D9_9FLOR (Sec-independent protein translocase protein TatA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0D9_9FLOR)

HSP 1 Score: 130 bits (328), Expect = 6.560e-37
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 0
Query:   54 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQKRVEKSS-APTMTDTSATSVVDSRQEKAEA 147
            MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFR+AMQ+SLDEADRE+EQK  +K++ AP  T+ S+ S  +  QEKAEA
Sbjct:    1 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFREAMQESLDEADREIEQKHTDKTAQAPNTTNESSASTTNV-QEKAEA 94          
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A1X6P1X6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1X6_PORUM)

HSP 1 Score: 92.8 bits (229), Expect = 4.530e-21
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 0
Query:   31 HVCTRRTGSLSTSKAKNNRSRLQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQKRVEK 123
            H  TR   S + + A   R+ +QMG+FGLG PE+AV+ GVG+ +FGP K+A+ GK  G LAG +KKA++EFRDAM +SL +AD E+E ++  K
Sbjct:   28 HPPTRHAAS-AAAPAAGRRASVQMGIFGLGAPEIAVVVGVGLLLFGPKKLADYGKKAGSLAGDVKKATAEFRDAMDESLSDADAEIEARKATK 119          
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A7S0ZBV1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBV1_9RHOD)

HSP 1 Score: 90.1 bits (222), Expect = 2.970e-20
Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   19 SNSKKGLQSGLNHVCTRRTGSLSTSKAKNNRSR--LQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQKR 120
            SN    L+S     C  ++   +     N +    + MG+FGLG  EL V+AGVG+ +FGP K+AE GK LG LAG +KKA+SEF++AMQ+SLDEAD+E+  K+
Sbjct:   14 SNPLSSLKSSSGSFCQLKSKHAAVVPNTNRKESRVITMGIFGLGWGELLVVAGVGVLLFGPKKLAESGKSLGSLAGSVKKATSEFQEAMQESLDEADKEIAAKK 117          
BLAST of Gvermi12247.t1 vs. uniprot
Match: M1VCX5_CYAM1 (Similar to thylakoidal sec-independent protein transporter Tha4 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCX5_CYAM1)

HSP 1 Score: 89.4 bits (220), Expect = 8.260e-20
Identity = 45/70 (64.29%), Postives = 60/70 (85.71%), Query Frame = 0
Query:   50 SRLQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQK 119
            S LQMGLFGLG PE+AVIAGVG+ I+GPS+I ELG++LG LAG LK+ASSEF++ ++ SL +A++E +QK
Sbjct:   65 SALQMGLFGLGWPEIAVIAGVGLLIWGPSRIGELGRNLGTLAGNLKRASSEFKEGLETSLADAEKEEKQK 134          
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A7S2ZGP5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZGP5_9RHOD)

HSP 1 Score: 89.0 bits (219), Expect = 8.830e-20
Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 0
Query:   54 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQKR 120
            MGLFGLG PEL VI GV   IFGP+KI+ELGK+LG +AG +KKA+SEF+DAMQ+SL++AD+E+ +++
Sbjct:   50 MGLFGLGFPELLVIGGVTALIFGPNKISELGKNLGSVAGSVKKATSEFQDAMQESLEQADKEIAEQK 116          
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A7S0BK48_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BK48_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 2.620e-19
Identity = 43/63 (68.25%), Postives = 54/63 (85.71%), Query Frame = 0
Query:   54 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADREL 116
            MGLFGLG PEL VI GV   IFGP+KI+ELGK LG +AG +KKA+SEF+DAMQ+SL++AD+E+
Sbjct:   50 MGLFGLGFPELLVIGGVTALIFGPNKISELGKSLGSVAGSVKKATSEFQDAMQESLEQADKEI 112          
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A7J7IRQ4_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRQ4_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 3.280e-19
Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 0
Query:   43 SKAKNNRSRLQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQK 119
            ++  N  + +QMGLFGLG PE+AVI GVG+ I+GPS++ ELG++LG LAG LK+ASSEF++ ++ SL EA++E + K
Sbjct:   58 ARTANAANAVQMGLFGLGWPEIAVIVGVGLLIWGPSRVGELGRNLGSLAGNLKRASSEFKEGLETSLAEAEKEQQSK 134          
BLAST of Gvermi12247.t1 vs. uniprot
Match: R7QCU7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCU7_CHOCR)

HSP 1 Score: 83.6 bits (205), Expect = 1.000e-17
Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   11 FVPTSANWS-NSKKGLQSGLNHVCTRRTGSLSTSKAKNNRSRLQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAG 92
            FV   A +S  S+  LQ GL+ +C RRT      + +  R+ + MGLFGLG PELAVIA VG+FIFGP KIAE+GKDLGG+AG
Sbjct:    7 FVAGPAPFSLTSRLTLQRGLDSICRRRT--TFAVQYRTRRAHISMGLFGLGFPELAVIATVGVFIFGPGKIAEMGKDLGGIAG 87          
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A5J4YZZ5_PORPP (Sec-independent protein translocase protein TatA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZZ5_PORPP)

HSP 1 Score: 79.7 bits (195), Expect = 3.540e-16
Identity = 39/87 (44.83%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   56 LFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQKRVEKSSAPTMTDTSATSVVDSRQ 142
            +FGLG  E+AV+AGV + IFGPSK+A  GK LG +AG +KKA++EF++AMQ+SL+ AD+E+  ++ ++ SA    + + T+   + +
Sbjct:   56 VFGLGAGEIAVVAGVALLIFGPSKLASSGKSLGSMAGSVKKATAEFQEAMQESLEXADKEIAARKAKEGSAEASKEGTTTAAASTEE 142          
BLAST of Gvermi12247.t1 vs. uniprot
Match: A0A7S0YH58_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YH58_9CRYP)

HSP 1 Score: 80.1 bits (196), Expect = 4.190e-16
Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   39 SLSTSKAKNNRSRLQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMQDSLDEADRELEQKRVEKSSAP 127
            SL  ++     + LQMGLFGLG PE+AVI  V   IFGPS IA +GKDLG LAG LK  +S F +AM DSL EA++E ++   E    P
Sbjct:   56 SLPKARGTGGMTSLQMGLFGLGWPEIAVIGVVVALIFGPSNIAGMGKDLGKLAGSLKAEASTFSEAMNDSLAEAEKEFKKGEEEADEEP 144          
The following BLAST results are available for this feature:
BLAST of Gvermi12247.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0D9_9FLOR6.560e-3778.95Sec-independent protein translocase protein TatA n... [more]
A0A1X6P1X6_PORUM4.530e-2150.54Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZBV1_9RHOD2.970e-2047.12Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M1VCX5_CYAM18.260e-2064.29Similar to thylakoidal sec-independent protein tra... [more]
A0A7S2ZGP5_9RHOD8.830e-2064.18Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BK48_9RHOD2.620e-1968.25Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IRQ4_9RHOD3.280e-1954.55Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
R7QCU7_CHOCR1.000e-1756.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YZZ5_PORPP3.540e-1644.83Sec-independent protein translocase protein TatA n... [more]
A0A7S0YH58_9CRYP4.190e-1651.69Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availableGENE3D1.20.5.3310coord: 58..116
e-value: 1.9E-11
score: 45.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..124
NoneNo IPR availablePANTHERPTHR33162SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 11..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416TatA_B_Ecoord: 59..105
e-value: 2.7E-9
score: 36.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3969245..3969688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12247.t1Gvermi12247.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3969245..3969688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12247.t1 ID=Gvermi12247.t1|Name=Gvermi12247.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=148bp
MLHQRSERMGFVPTSANWSNSKKGLQSGLNHVCTRRTGSLSTSKAKNNRS
RLQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSE
FRDAMQDSLDEADRELEQKRVEKSSAPTMTDTSATSVVDSRQEKAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E