Gvermi12493.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A2V3IQ26_9FLOR (Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ26_9FLOR) HSP 1 Score: 447 bits (1150), Expect = 1.450e-154 Identity = 219/319 (68.65%), Postives = 257/319 (80.56%), Query Frame = 0
Query: 14 ILQEAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTSFAPGSTLSAVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADPRIILLLTDGQDNQAPSGTSVAPAIKNAGITIATVGIGNGVDTASLQSIASSPDLFTFVDSFSTFITKVEEIVESLCPEPECANIDCAKCGQILECYVNSGFPNLDQAVCDVVSDQSQFCTTRGGDGTACLQQCKGRFGVACFTEESFGSCPQMIGSDPKCKGGAARNRPADLSNFASYTVCVRADGTVEVSCLNDKCESGSSCSCAQPF 332
+L+ + Q SC PLNVCFAIDESGSI T+F +QT+A++AIAQ L++FAPGSTLSAVGFS+ AE++QSPTTDIN F+ AIQ N Q+G +TSSG+ L LC++ I SAADPRII+LLTDG DN P GTSVA IKN GI I T+GIG+G++ SL+SIASSPDLF FVD FS+F +E IV+++CP PEC N DCAKCGQ+LECYVNSGF + D+AVCDVV+D SQFCTTR GDGTAC QQCKGR GV CF SFGSCPQ IGSD KC GGA + R ADLSNFASYTVC+ +G VEVSCL+ KCESGS CSCA PF
Sbjct: 64 LLRITSAQRSCPPLNVCFAIDESGSISPTDFIEQTEAIVAIAQELSTFAPGSTLSAVGFSSFAELIQSPTTDINGEFVQAIQGNSQLGGTTSSGAALQLCQTQIASAADPRIIVLLTDGADNTMPFGTSVAGGIKNNGIIIITIGIGSGINAPSLRSIASSPDLFIFVDDFSSFEDSIEVIVDTICPVPECVNFDCAKCGQVLECYVNSGFVSADEAVCDVVNDASQFCTTRRGDGTACQQQCKGRQGVQCFPGTSFGSCPQRIGSDAKCMGGAGKGRRADLSNFASYTVCISRNGRVEVSCLSQKCESGSHCSCASPF 382
BLAST of Gvermi12493.t1 vs. uniprot
Match: Q7XZ43_GRIJA (Alpha 1 type VII collagen (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ43_GRIJA) HSP 1 Score: 137 bits (344), Expect = 1.400e-35 Identity = 79/169 (46.75%), Postives = 106/169 (62.72%), Query Frame = 0
Query: 24 CLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTSFAPGSTLSAVGFSN------TAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADPRIILLLTDGQDNQAPSGTSVAPAIKNAGITIATVGIGNGVDTASLQ-SIASSPDLFTFVDSFS 185
C P +C+AIDES SI TEF Q AL+ I ++ APGS+ +AV FS EVV T+D+ F+ A+ NP+ G TSSG+GL LC+ + A P++ILL+TDG DN+ P G V AIK G T+A VGIG+ ++ L+ +I+SSPDL+TFVD FS
Sbjct: 25 CPPAKICYAIDESESISGTEFAQLNAALVEITNTFSTAAPGSSFAAVDFSGLQNGGGVGEVVSPLTSDVTT-FLAALAANPKRGGFTSSGTGLNLCDQELDGQAQPKVILLITDGVDNRNPIGVDVEAAIKANGNTVAVVGIGDNLNDDDLRDTISSSPDLYTFVDDFS 192
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A2V3IFK7_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR) HSP 1 Score: 131 bits (329), Expect = 1.610e-31 Identity = 67/180 (37.22%), Postives = 112/180 (62.22%), Query Frame = 0
Query: 20 TQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTSFAPGSTLSAVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADPRIILLLTDGQDNQAPSGTSVAPAIKNAGITIATVGIGNGVDTASLQSIASSPDLFTFVDSFSTFITKVEEIVESLC 199
T C +VCF +DESGSI S+E+ + +I+++++++S G+ SA GF+++A V+Q+ T+++ F+P I + Q G ST+ +GL C + + A R+I+L+TDG DN P ++AP +K AG+ I T+G+G+GVD L+S+A++P F +FS+ V + ES C
Sbjct: 33 TSEDCSINSVCFVLDESGSIQSSEYIVEQQFVISVSRVISSRTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGDNGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFF-IPSTFSSLPADVVRVAESSC 211
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 122 bits (306), Expect = 1.740e-27 Identity = 74/196 (37.76%), Postives = 117/196 (59.69%), Query Frame = 0
Query: 13 VILQEAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTSFAPGSTLSAVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADPRIILLLTDGQDNQAPSGTSVAPAIKNAGITIATVGIGNGVDTASLQSIASSPDLFTFVDSFSTFITKVEEIVESLC------PEP 202
V+ Q+ +++ +C +VCFA+D+SGSI + + +I +A+ + S + G+ SA GFSN+ +Q+ T+ + +F+PA+ + ST+ +GL C + I ++I+LLTDGQDN P +S+AP IK+AGITI TVGIG GV L+ +AS+PD F + FST ++V + + C PEP
Sbjct: 22 VVRQDDSSEETCPIDSVCFAMDQSGSI-FLNYGAIQNFVIEVAREIESRSFGTLFSAYGFSNSVTTIQTSTSQLETLFVPAVTASGPPSGSTNMYAGLNGCFNDIADQPGNKVIILLTDGQDNAFPLASSLAPVIKDAGITIVTVGIGAGVSAPYLEQLASTPDFFIQL-MFSTLPSEVVSLSQMTCDAVDASPEP 215
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A2V3IGK2_9FLOR (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR) HSP 1 Score: 101 bits (252), Expect = 8.010e-21 Identity = 68/201 (33.83%), Postives = 109/201 (54.23%), Query Frame = 0
Query: 14 ILQEAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIA-QLLTSFAPGSTLSAVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADPRIILLLTDGQ--DNQAPSGTSVAPAIKNAGITIATVGIGNGVDTASLQSIASSPDLFTFVDSFSTFITKVEEIVESLCPEPECANIDCAK 211
+L + + C NVC+ +D+S S+ ++++D++ D +I IA Q+ A SAV FS AEV+Q PT D+N F+ A+ Q T + L+ C+ L+ A + I+L+TDG N+ + ++A IK+ G I TVG+G+ +D A L+ IAS PDLF SF + ++V +C + DC+K
Sbjct: 18 VLGQPPVEKPCRIDNVCYLLDQSDSVTTSQYDKEKDFVIKIARQVELKSASDPFNSAVAFSTDAEVIQDPTRDLNK-FVNAVNGPRQFFEGTKFSTALSECQELLEDAEGSKAIVLITDGGFFGNEGQNAEAIAAEIKDEGTFIVTVGVGSLIDEAFLRRIAS-PDLFVGT-SFDNLDEVIMQVVSDICVD--IIETDCSK 213
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A7S1THZ2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THZ2_9RHOD) HSP 1 Score: 95.1 bits (235), Expect = 1.760e-19 Identity = 65/185 (35.14%), Postives = 103/185 (55.68%), Query Frame = 0
Query: 6 AALLLLCVILQEAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTSFAPGSTLS----AVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADPRIILLLTDGQDNQAPSGTSVAPAIKNAGITIATVGIG-NGVDTASLQSIASSPDLFTFVDSFS 185
A +LLL V + T C N+CFAIDESGSID+TEF +++A+ IA + S + ++ A GFS+ +++ SP + ++ + AI N Q +T +G+ L C +L+ SA+ R+++L+TDG P A AIK I + TVG+G A L+S++S P + D+F+
Sbjct: 35 ACVLLLWVSVAVVVTAQPCAVNNICFAIDESGSIDATEFQTESNAVGTIATRIDSISSSVGITTKYGAYGFSDRVKLI-SPLAQLPSL-LAAITANTQTPGATYTGAALTSCRTLLSSASGVRVVVLVTDGVPTDDPG--PAAAAIKANNIKLVTVGVGVTATAEALLKSLSSGPGFYVNADNFT 215
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A7S1XDR4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDR4_9RHOD) HSP 1 Score: 93.6 bits (231), Expect = 2.890e-18 Identity = 69/197 (35.03%), Postives = 101/197 (51.27%), Query Frame = 0
Query: 15 LQEAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTSFAPGSTL----SAVGFSNTAEVVQSPTTDINAVFIPAIQNNP-QVGLSTSSGSGLALCESLIGSAADPRIILLLTDGQDNQAPSGTSVAPAIKNAGIT-IATVGIGNGVDTAS-LQSIASSPDLFTFVDSFSTFITKVEEIVESLCPEPEC 204
L A C N+CFAIDESGSI + F +T+ ++ +A+ L + + +A+ F + V S TD+ A F + NNP + T C SL+ A+ R I+L+TDG + + A A+K+ T I TVG+G AS LQS+AS PD F SFS K E++V+++CP P+C
Sbjct: 24 LWALAYSQPCTINNICFAIDESGSISDSAFVDETNVVLQVARALDMISKMQGIQTKYAAIDFGASESTVSS-LTDV-ASFEQRVSNNPHRKDPDTLYAPAFERCGSLLSGASGVRAIVLVTDGAPSDTTAAIVAANALKSMPNTFIITVGVGLTSSRASFLQSLASGPDFFAEASSFSAL--KFEKVVQAICPPPKC 216
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A1D3DZF4_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces thermolilacinus SPC6 TaxID=1306406 RepID=A0A1D3DZF4_9ACTN) HSP 1 Score: 87.4 bits (215), Expect = 2.640e-15 Identity = 67/191 (35.08%), Postives = 104/191 (54.45%), Query Frame = 0
Query: 17 EAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTS---FAPGSTLSAVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADP---RIILLLTDGQDNQAPSGTSVAPAIKNAGITIATVGIGNGVDTASLQSIASSP---DLFTFVDSFSTFITKVEEIVESL 198
E++TQ++ P ++ +DESGSI+ TEF Q TD ++ + FA G + VGFS TA+ V + D AV AI NN Q+ ST GL +G DP ++++++TDG N S A A++ T+ VG+G+GV A+L+++AS P + FT V SF +E++VE++
Sbjct: 57 ESSTQST--PTDLVLVLDESGSINDTEFGQLTDFADSVVAAVADDGLFANGGRVGVVGFSQTAQDVSPLSADEGAVR-SAIVNNTQMRSSTCISCGLDRAGVQLGPD-DPLRNQVVIVITDGNANPGDPTASAAAALQGKA-TVFAVGVGDGVSQATLETVASGPGSDNTFT-VGSFDDLADLLEKLVEAV 241
BLAST of Gvermi12493.t1 vs. uniprot
Match: A0A543PP74_9MICO (von Willebrand factor type A domain-containing protein n=1 Tax=Humibacillus xanthopallidus TaxID=412689 RepID=A0A543PP74_9MICO) HSP 1 Score: 85.9 bits (211), Expect = 8.690e-15 Identity = 69/192 (35.94%), Postives = 104/192 (54.17%), Query Frame = 0
Query: 17 EAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTS---FAPGSTLSAVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADP---RIILLLTDGQDNQAPSGTSVAPAIKN--AGITIATVGIGNGVDTASLQSIASSP--DLFTFVDSFSTFITKVEEIVESL 198
E++TQ++ P ++ +DESGSIDSTEF Q A+ + + + FA G + VGFS AEVV SP + AI NPQ G ST GL +++G A DP ++++++TDG A SG A A N A + VG+G+G+ ++L++IAS P D V FS+ T + +V ++
Sbjct: 67 ESSTQST--PTDLVLVLDESGSIDSTEFGQLKSFADAVVEAVGNDGLFANGGRVGVVGFSTGAEVV-SPLSGNETDVRNAIAANPQSGGSTCMSCGLNEASTVMG-ADDPARNQLVIVITDGN---ATSGDPTASAAANLQAKAEVFAVGVGDGISQSTLETIASGPGADNTFSVGGFSSLATLLSALVSAV 251
BLAST of Gvermi12493.t1 vs. uniprot
Match: UPI001674109F (PKD domain-containing protein n=1 Tax=Streptomyces roseolilacinus TaxID=66904 RepID=UPI001674109F) HSP 1 Score: 84.0 bits (206), Expect = 3.610e-14 Identity = 64/190 (33.68%), Postives = 100/190 (52.63%), Query Frame = 0
Query: 17 EAATQNSCLPLNVCFAIDESGSIDSTEFDQQTDALIAIAQLLTS---FAPGSTLSAVGFSNTAEVVQSPTTDINAVFIPAIQNNPQVGLSTSSGSGLALCESLIGSAADPR--IILLLTDGQDNQAPSGTSVAPAIKNAGITIATVGIGNGVDTASLQSIASSP---DLFTFVDSFSTFITKVEEIVESL 198
E++TQ++ P ++ +DESGS++ TEFDQ TD + + FA G + VGFS+ AE V + D AV AI NNPQ+ +T GL +G R ++++TDG N S A A++ T+ VG+G+GV A+L+++AS P + FT SF +E++V ++
Sbjct: 8 ESSTQST--PTDLVLVLDESGSVNDTEFDQLTDFADGVVAAVADDGLFANGGRVGVVGFSHVAEDVIPLSGDEGAVR-SAIANNPQLRNNTCISCGLDRAGVQLGPDDPQRNQAVIVITDGNANPGDPTASAAAALQGKA-TVFAVGVGDGVSQATLETVASGPGADNTFT-AGSFDDLAALLEKLVAAV 192 The following BLAST results are available for this feature:
BLAST of Gvermi12493.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12493.t1 ID=Gvermi12493.t1|Name=Gvermi12493.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=334bpback to top |