Gvermi12424.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi12424.t1 vs. uniprot
Match: A0A2V3IGE0_9FLOR (RNA polymerase II-associated protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGE0_9FLOR) HSP 1 Score: 415 bits (1067), Expect = 3.960e-131 Identity = 230/442 (52.04%), Postives = 300/442 (67.87%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQR---SFQTANQHAKQAHQAPSESARSAGTDQ--------------HPPLFSVSEGTNLGVA---ETKQQHEQLERAKRLWMTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINHGPRVTEPMLKSDGIKLAFSPLPATDTFHSALTNQVAYLEAVECLLQKSCVLDQRELIRDMYFASAFYSPPFVRENDCSLLSVLSELHVITTLIEIAKARCTAVSTVEISKRALNAVRMIVNNSPSLPESYVLEQHSSKPSRVLDMLMQQAVGTDRLAPSTTMLACDIIANIFVKATWVDKDKDHGLQRLSLLEDFLLETAAHLNWAMRDTPFQLNPIMQEAAKGVLRLFRAYLSQNLG 422
MS QQI +AQ++I++TL+P SI+FLK+R S +N+ A S S GTD P S+S+ E +Q +Q ERAK +WMTDATE + TQ VD +L AV+DMGPIA ERFDLTGN+LTA+++Q LPTHKGLHHHGT P SAGYTLADLL+LTRST+LSQR++AL+VLT+LI H VTEPML+S G+KL F+PLPA DTFHSA+TNQVAYLEAVE LLQ ++ L+RD+YF+S FYS ++ L+ VL ++H +T L++IA A T++ST+ +KR+LNA R+IV + L + EQ S SR+L+ LMQ AVG D+L+ STTMLACDI+A K+ WV+KD L E+FLL+ A HLNWA+RD+PFQL + +E AKGVLRLFR++L++ G
Sbjct: 169 MSVQQIREAQQQIYSTLSPQSIAFLKKRRAKSSPVSNEPKPPLPPAVSPSLPPGGTDSIQKQQLSRGSAHTASPKSASLSDSFKRSPHNSNEHQQDADQFERAKSMWMTDATEPLQTQTVVDEVLSAAVEDMGPIATERFDLTGNVLTAEQIQSLPTHKGLHHHGTSPASAGYTLADLLVLTRSTVLSQRIVALRVLTALISLHAEHVTEPMLRSGGMKLVFAPLPAADTFHSAITNQVAYLEAVEALLQPVPSFEENMLVRDLYFSSDFYSSHIQQQPTSPLVQVLGQVHCVTVLLDIASALHTSISTLSFAKRSLNACRIIVLKASDLVLRVIKEQDSPPVSRILNTLMQLAVGKDKLSSSTTMLACDILALFISKSNWVEKDAISSFDERVLSENFLLDVAVHLNWALRDSPFQLRGLERETAKGVLRLFRSFLTRANG 610
BLAST of Gvermi12424.t1 vs. uniprot
Match: R7QQ98_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ98_CHOCR) HSP 1 Score: 277 bits (708), Expect = 1.220e-80 Identity = 170/427 (39.81%), Postives = 240/427 (56.21%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQRSFQTANQHAKQAHQAPSESARSAGTDQHPPLFSVSEGTNLGVAETKQQHEQLERAKRLWMTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINHGPRVTEPMLKSDGIKLAFSPLPATDTFHSALTNQVAYLEAVECLLQKSCVLDQRELIRDMYFASAFYSPPFVRENDCSLLSVLSELHVITTLIEIAKARCTAVSTVEISKRALNAVRMIVNNSPSLPESYVLEQHSSKPSRVLDMLMQQAVGTDRLAPSTTMLACDIIANIFVKATWVDKDKDHGLQRLSLLEDFLLETAAHLNWAMRDTPFQLNPIMQEAAKGVLRLFRAYLSQNLGKHMFT 427
M+PQQIL+AQREI + L+PD+I+FLK RS APS + S D H P +S + +E+ KRLWMTDA + + VD +L KA+ +GP+A RFDL G+ LT ++ LPTH GLHHHG P SAGYTLADLL+LTRST+L QRV+AL++LT+L+ NHG V+ P+++S G+ LAF+P P+ F +ALTN++A++EAVE L++ L Q L+ Y AS FYSP + +LSVL+E + L+ IA+ + T + + RAL VR IV S ++ + +S+ + Q +G D L P T +LACD ++ V A W D + L + F+ L W +RD + + +AAKG LR+ RA L+ G FT
Sbjct: 1 MTPQQILEAQREIASVLSPDNIAFLKNRS-----------RPAPSPTPLS---DSHSPSTPLS------------ADDHVEQQKRLWMTDACVPLESDTSVDSLLSKALHALGPLASHRFDLKGHSLTPHQIAHLPTHLGLHHHGAEPASAGYTLADLLLLTRSTVLGQRVLALRILTALLQNHGSSVSAPLVESGGLALAFAPFPSRLNFEAALTNRIAFIEAVEALVKPHSHLAQDCLVPSFYLASRFYSPN-LHLRPPPVLSVLAESACVPVLVNIARHDASNTETEQFALRALAMVRAIVTFSAKSSRDMLVGRATSQA------MQQLCLGRDTLRPITALLACDALSQAIVNAAWSDPELVKSLDDSCFSDTFMRRVTQPLTWFLRDASVRPSECHFQAAKGALRMLRACLTFQRGLMPFT 394
BLAST of Gvermi12424.t1 vs. uniprot
Match: A0A1X2H0E3_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H0E3_SYNRA) HSP 1 Score: 94.4 bits (233), Expect = 6.470e-17 Identity = 84/250 (33.60%), Postives = 123/250 (49.20%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQRSFQTANQHAKQAHQAPSESARSAGTDQHPPLFSVSEGTNLGVAETKQQHEQLERAKRLWMTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINHGPRVTEPMLKSDGIKLAFSPLPATDTFHSALTNQ-----VAYLEAVECLLQKSCVLDQRELIRDMY 245
MS Q++ +A++E+ + L+P+SIS L R + A + +PS +AR A+ ++ EQ ER K WM + + P E VD Q +V + RFDL GNI+ A V V P HKGLHHHG P+ AGYTLA+LL L RST+ SQR M L L S I+ TEP+ + + A+ SAL ++ VA ++A+ L+ E++++ Y
Sbjct: 234 MSEQELEEARQEVLSQLSPESISILLNRPKKPA------VYSSPSVAARQT-------------------AQEQKAAEQAERDKLAWMDTSLQPPPLPEAVDE--QDSVY-----RRVRFDLQGNIMDAS-VDV-PRHKGLHHHGDEPDKAGYTLAELLYLVRSTVASQRAMVLTTL-SRILWRAKSATEPVWVDILRIFRRADIAASIYLRSALDDRHLIVLVAAVQALAALVLPQEAFAAPEVLKETY 448
BLAST of Gvermi12424.t1 vs. uniprot
Match: A0A2P4YLX9_9STRA (RNA polymerase II-associated protein 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLX9_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.070e-15 Identity = 83/266 (31.20%), Postives = 131/266 (49.25%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQRSFQTANQHAKQAHQAPS-ESARSAGTDQHPPLFSVSEGTNLGVAETKQQHEQLERAKRLWMTDATESIPTQEHVDHILQKAVQDMG-PIAK----ERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINHG-------PRVTEPMLKSDGIKLAFSPLPATDTFHSALTNQVAYLEAVECLLQKSCVLDQRELIRDMYFASAFYSP 253
MSPQ+IL+AQ+E+ TL+P I LK R ++ N+ ++ + + ES D+ + + +A K + E E+ KRL + + TQ D KA + M P+A+ ERFDL G +L A + + LP H GL HHG P++AGYTL +LL L RS++ SQR MAL V+ ++ N P V + + I L + D ++AL+ V+ L A ++ + D + ++ + Y P
Sbjct: 139 MSPQEILEAQQELLRTLDPTLIEKLKNRR-KSGNKREREVKKVVAGESVVRMEEDEQLQKEEMIKN----LAAVKTEEELKEQTKRLPADERAKLDWTQNVKDKKDSKAAKKMARPVAEDATLERFDLEGKMLEATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSVASQRAMALIVVAKILHNRQVLEQSSLPLVPRVLPRDMAITLR---IVLDDQNYTALSAGVSALHAFIVPVETNATSDTHIDLSELKHGTIVYPP 395
BLAST of Gvermi12424.t1 vs. uniprot
Match: W2MZU9_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MZU9_PHYPR) HSP 1 Score: 87.4 bits (215), Expect = 8.520e-15 Identity = 71/215 (33.02%), Postives = 107/215 (49.77%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQRSFQTANQHAKQAHQAPSESARSAGTDQHPPLFSVSEGTNL--------GVAETKQQHEQLERAKRL-----WMTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINH------GPRVTEPMLKSD 196
MSPQ+IL+AQ+E+ TL+P+ + LK R+ + ++ + + + + G + EG +A K + E E+AK L D T++ E V + + A+ ERFDL G +L A + + LP H GL HHG P++AGYTL +LL L RS++ SQR MAL V+ ++ N G RVT +L D
Sbjct: 141 MSPQEILEAQQELLRTLDPELVKKLKNRN---KKERKREENMVKTRNKVAIGES----IMKHDEGNEQIQKEEMIKSLAAVKTEEELKEQAKLLPAEERAKLDWTQTTKKDEKVANGKKIALPVAEDATLERFDLDGKLLEATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSVASQRAMALNVVAKILHNRQLQERAGLRVTPRVLPRD 347
BLAST of Gvermi12424.t1 vs. uniprot
Match: V9ET35_PHYPR (Uncharacterized protein (Fragment) n=9 Tax=Phytophthora TaxID=4783 RepID=V9ET35_PHYPR) HSP 1 Score: 87.4 bits (215), Expect = 1.190e-14 Identity = 71/215 (33.02%), Postives = 107/215 (49.77%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQRSFQTANQHAKQAHQAPSESARSAGTDQHPPLFSVSEGTNL--------GVAETKQQHEQLERAKRL-----WMTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINH------GPRVTEPMLKSD 196
MSPQ+IL+AQ+E+ TL+P+ + LK R+ + ++ + + + + G + EG +A K + E E+AK L D T++ E V + + A+ ERFDL G +L A + + LP H GL HHG P++AGYTL +LL L RS++ SQR MAL V+ ++ N G RVT +L D
Sbjct: 141 MSPQEILEAQQELLRTLDPELVKKLKNRN---KKERKREENMVKTRNKVAIGES----IMKHDEGNEQIQKEEMIKSLAAVKTEEELKEQAKLLPAEERAKLDWTQTTKKDEKVANGKKIALPVAEDATLERFDLDGKLLEATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSVASQRAMALNVVAKILHNRQLQERAGLRVTPRVLPRD 347
BLAST of Gvermi12424.t1 vs. uniprot
Match: A0A329RN83_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RN83_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.750e-14 Identity = 106/367 (28.88%), Postives = 171/367 (46.59%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQR--SFQTANQHAKQAHQAPSESARSAGTDQHPPLFSVSEGT-NLGVAETKQQ-HEQL------ERAKRLWMTDATESIPTQE--HVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINH------GPRVTEPMLKSDGIKLAFS-PLPATDTFHSALTNQVAYLEAVECLLQKSCVLDQRELIRDMYFASAFYSPPFVRENDCSLLSVLSELHVITTLIEIAKARC---TAVSTVEISKRALNAVRMIVNNSPSLPESYVLEQ----HSSKPSRVLDMLMQQAVGTDRLA 341
MSPQ+IL+AQ+E+ TL+P + LK R + ++ +A + S D+ E +L +T+++ HEQ ERAK W T++ T E H I + V+D ERFDL G +L A + + LP H GL HHG P++AGYTL +LL L RS++ SQR MAL V+ ++ N G VT +L D +A + + D ++AL+ V+ L A + + ++ + PP V + L + H + ++ I A T++S +++ AL+ V+ ++N Y+LE S ++LD+L+ A + R A
Sbjct: 143 MSPQEILEAQQELLRTLDPKLVEKLKSRRKKEKKREENVVKAGKKVSIGESIVKHDEEKEQVQKEEMIKSLAAVKTEEELHEQSKLLPAEERAKLDW----TQTTKTDEKAHGKKISRPVVEDA---TLERFDLDGKMLDATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSMASQRAMALNVVAKILHNRQLQEHTGLPVTPRVLPRD---MAMTLRIVLDDQNYTALSAGVSALHAFIVPVDDGS--SDESYLSELKHGTVVL-PPRVHLHRNGLAENKNHSHEVEEVVYIDTAEADDGTSISDEDLA--ALDPVQALLNMDLGTRLRYILETIQLPDQSATEKMLDILIAVARHSPRAA 493
BLAST of Gvermi12424.t1 vs. uniprot
Match: D0N9F5_PHYIT (RNA polymerase II-associated protein 1, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N9F5_PHYIT) HSP 1 Score: 85.1 bits (209), Expect = 6.370e-14 Identity = 105/371 (28.30%), Postives = 166/371 (44.74%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQR----------SFQTANQHA--KQAHQAPSESARSAGTDQHPPLFSVSEGTNLGVAETKQQHEQL---ERAKRLW-MTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINH------GPRVTEPMLKSDGIKLAFS-PLPATDTFHSALTNQVAYLEAVECLLQKSCVLDQRELIRDMYFASAFYSPPFVRENDCSLLSVLSELHVITTLIEIAKARC---TAVSTVEISKRALNAVRMIVNNSPSLPESYVLEQ----HSSKPSRVLDMLMQQAVGTDRLA 341
MS Q+I++AQ+E+ TL+P+ + LK R S QT N+ A + + E + + L +V L K+Q + L ERAK W T P H I + +D ERFDL G L + + LP H GL HHG PE+AGYT+ +LL L RS++ SQR MAL V+ ++ N G VT +L D LA + + D ++AL+ V+ L A + D E + ++ + + PP V + + S + + ++ I T++S E++ AL+ V+ +V+ + Y+LE ++LD+L A + R A
Sbjct: 143 MSSQEIMEAQQELLRTLDPELVEKLKNRKKKEKKMGRNSVQTVNKVAIGQSIRKRDEEDEQLQKEEMIKSLAAVKTEQEL-----KEQAKLLSVEERAKLDWTQTSKKSEKPATGHSKKIARPVAEDA---TLERFDLDGKSLQKTDAE-LPVHSGLFHHGDDPEAAGYTVPELLHLARSSVASQRAMALNVVAKILHNRQLQERAGLLVTPRVLPRD---LAMTLRIVLDDQNYTALSAAVSALHAFVVPVD-----DDEEFVSELKYGTVVL-PPTVHLHRNDVTKSKSHSNEVNEVVYIDTTEADDGTSISDDELA--ALDPVQALVSMDLATRLRYILESIQLPDQDATEKMLDILRAVARHSPRAA 493
BLAST of Gvermi12424.t1 vs. uniprot
Match: A0A0P1ALE3_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ALE3_PLAHL) HSP 1 Score: 83.2 bits (204), Expect = 2.700e-13 Identity = 66/197 (33.50%), Postives = 97/197 (49.24%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQRSFQTANQHAKQAHQAPSESARSAGTDQHPPLFSVSEGTNLGVAET----KQQHEQL---ERAKRLWMTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLIINHGPRVTE 190
MS Q+IL+AQ+E+ +L+P+ + LK R +T N + ++ ++ + NL +T K+Q + L ERAK W T+SI V ++ Q ERFDL G I+ A + P H GL HHG PE AGYT +LL LTRS++ SQR MAL ++ ++ N + E
Sbjct: 140 MSTQEILEAQKELLGSLDPELVKKLKNRRKKTENIEEVRNESFKTQVTIGESIVKNEDREKETLIKNLAAVKTEKELKEQEKLLTVEERAKLDW----TQSISKNSRVSR--KRVAQIAKEPTMERFDLNGKIVEATNADI-PVHSGLFHHGDDPEIAGYTFPELLHLTRSSVASQRAMALNIVAKVLHNRQLQTLE 329
BLAST of Gvermi12424.t1 vs. uniprot
Match: H3GPI4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPI4_PHYRM) HSP 1 Score: 82.0 bits (201), Expect = 6.430e-13 Identity = 64/182 (35.16%), Postives = 91/182 (50.00%), Query Frame = 0
Query: 1 MSPQQILQAQREIFATLNPDSISFLKQRSFQTANQHAKQAHQAPSESARSAGTDQHPPLFSVSE-GTNLGVAETKQQHEQLERAKRLWMTDATESIPTQEHVDHILQKAVQDMGPIAKERFDLTGNILTAQEVQVLPTHKGLHHHGTFPESAGYTLADLLILTRSTILSQRVMALKVLTSLI 181
MSPQ+I +AQ+E+ TL+P + LK R + K+ ES ++ + S++ T E + ERAK W DA + E +K ERFDL G++L A +V+ LP H GL HHG P +AGYT+ +LL L RS++ SQR MAL VL ++
Sbjct: 65 MSPQEIREAQQELLQTLDPQLVEKLKNRRKKQDKAPVKRTKVKIGESVVKEEEEKQEMIRSLAAVKTXXXXXEQAKLLPAEERAKLDWTQDAGK-----EKAARGKKKRRSVAEDATLERFDLDGHVLEATDVE-LPVHSGLFHHGDDPNAAGYTVPELLHLARSSVASQRAMALTVLAKVL 240 The following BLAST results are available for this feature:
BLAST of Gvermi12424.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12424.t1 ID=Gvermi12424.t1|Name=Gvermi12424.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=429bpback to top |