Gvermi12303.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12303.t1
Unique NameGvermi12303.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length288
Homology
BLAST of Gvermi12303.t1 vs. uniprot
Match: A0A2V3IMQ1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMQ1_9FLOR)

HSP 1 Score: 349 bits (895), Expect = 1.370e-118
Identity = 174/225 (77.33%), Postives = 195/225 (86.67%), Query Frame = 0
Query:   64 PKEPYPGYFADMKRMGLSEEEAYAQARKAEKQSNPVKSDKVGGAKNLFKPDGTPYAPWMA-VSAEYDASVIKKRTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPMSST 287
            PKEPYPG+F+DMKR GL+EE+AYAQA KA+ QSNPVKS KVGG KNL KPDGTPYAPWM  VS EYD +VIKKRTDA G+LAADPQS ELSG GLSWKMLGDELEL+WAT +E+ NKGFVVYRRA KSD W K+ D+RDKPAELASKGP GG YSFLV+D QPG+WVYRVSD D N+NVSDL+Q+LV+IES EDTR+QKIAL ALL I  LA FIGLSLDP+S+T
Sbjct:   26 PKEPYPGFFSDMKRTGLTEEQAYAQAAKAQNQSNPVKSAKVGGVKNLLKPDGTPYAPWMVNVSPEYDPTVIKKRTDATGRLAADPQSAELSGVGLSWKMLGDELELRWATSAEDNNKGFVVYRRAAKSDQWHKICDFRDKPAELASKGPQGGSYSFLVTDAQPGSWVYRVSDCDLNNNVSDLAQLLVQIESEEDTRVQKIALIALLIILGLAVFIGLSLDPLSTT 250          
BLAST of Gvermi12303.t1 vs. uniprot
Match: A0A7S2ZH05_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH05_9RHOD)

HSP 1 Score: 211 bits (537), Expect = 6.550e-64
Identity = 109/226 (48.23%), Postives = 153/226 (67.70%), Query Frame = 0
Query:   63 IPKEPYPGYFADMKRMGLSE-EEAYAQARKAEKQSNPVKSDKVGGAKNLFKPDGTPYAPWM--AVSAEYDASVIKKRTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPMS 285
            +P EPYPGY+AD++R GL   EE   +A +A+ +S   K  KVGG  ++++ DGT YAPWM  A+  + D+  +K ++DAVG L  DPQ+ EL+G GL +K LGDEL L W+TGSE  N+GFV+ +R GK+D W K++D+   PAEL SKG  GG YS+L    +PGTW+YRVSD+D+N   SDLSQ +VE++S  + R+Q  AL  L+A   L   +  ++D +S
Sbjct:   56 LPPEPYPGYYADLERSGLDPVEEMKKKAARAQGKSE--KKKKVGGKASMYRSDGTAYAPWMVGAIIEDVDSMGVKSKSDAVGSLRTDPQAQELAGVGLKYKSLGDELLLTWSTGSERSNQGFVIRKRKGKTDEWIKIADFDSHPAELTSKGAQGGDYSWLDKSPEPGTWIYRVSDIDKNGVQSDLSQTIVELQSEGEQRVQIAALIGLIAFLVLFGAVAANIDKLS 279          
BLAST of Gvermi12303.t1 vs. uniprot
Match: A0A7S0T6E7_9RHOD (Hypothetical protein n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6E7_9RHOD)

HSP 1 Score: 211 bits (536), Expect = 1.010e-63
Identity = 120/225 (53.33%), Postives = 154/225 (68.44%), Query Frame = 0
Query:   65 KEPYPGYFADMKRMGLSEEEAYAQARKAEKQSNPVKSDKVGGAKNLFKPDGTPYAPWMA--VSAEYDASV-IKKRTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFI-GLSLDPMS 285
            KEPYPGYF D++R G     A A+ +K ++++      KVGG K++++ DGT YAPWM   V  E D  V I  +TDAVGK+A DPQ  EL+G+GL WK+LGDELEL WATG E GN GF++ +R GKSD ++ + DY+  PA   SKGP GG YS+L    +PGTW+YRVSDV E+  VSDLSQ LVEIES ED++ Q+IA+  + A+ ALA F  G   DP S
Sbjct:   68 KEPYPGYFKDLERSGGG---AVAEPKKKKREA------KVGGKKSMYRADGTAYAPWMVGQVIEEPDEFVPIAPKTDAVGKMAKDPQQQELAGSGLKWKLLGDELELTWATGDETGNVGFMLQKRRGKSDKFELVDDYKSLPATFQSKGPAGGVYSYLGPKPEPGTWIYRVSDVAEDGTVSDLSQTLVEIESDEDSKKQRIAVI-VFAVIALALFAAGFLSDPHS 282          
BLAST of Gvermi12303.t1 vs. uniprot
Match: A0A7S1EU49_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU49_9RHOD)

HSP 1 Score: 206 bits (525), Expect = 3.710e-62
Identity = 133/297 (44.78%), Postives = 171/297 (57.58%), Query Frame = 0
Query:    1 MVAFVSV---------PFISSRGRFSQRSQCFLSSRPTTLRARRQWSMNNASEETSKQTNPEPSSTPTEPEIPKEPYPGYFADMKRMGLSEEEAYAQARKAEKQSNPVKSDKVGGAKNLFKPDGTPYAPWMA---VSAEYDASVIKKRTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPMS 285
            MV FVSV         P +SSRGR    S C + S  T  R R      +       ++N E S    +PE    PYPGY+ D+++ G ++  A A   K E+        KVGG K+L++PDG  YAPWM    +    + + +  +TDA GKLA DPQ  EL+G GL  KMLGDELEL W+TGSEE   GF + RR GK   W++L DY+    +L SKG  GG YS+L+   +PGTW+YRVSDV EN  V+DLSQ LVEIES ED + QK+ALA  + +  + A IG   DP S
Sbjct:    1 MVGFVSVVGGNGSVSGPSVSSRGR----SSCSVGS-VTQYRVR------SGRVRVYSESNDEISEVERKPE----PYPGYYKDLEKSGAADIAAAASPTKKER--------KVGGKKSLYRPDGRAYAPWMIGTLIEEPGEFAPVASKTDAKGKLAVDPQQQELAGVGLKSKMLGDELELSWSTGSEENIAGFSLQRRRGKDSVWEQLDDYKTSK-DLKSKGVKGGDYSYLIPKPEPGTWIYRVSDVSENGAVNDLSQTLVEIESEEDQKKQKLALAVFVILAVIFAAIGFLSDPQS 273          
BLAST of Gvermi12303.t1 vs. uniprot
Match: M1V5W6_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5W6_CYAM1)

HSP 1 Score: 201 bits (510), Expect = 1.240e-59
Identity = 112/233 (48.07%), Postives = 149/233 (63.95%), Query Frame = 0
Query:   60 EPEIP--KEPYPGYFADMKRMGLSEEEAYAQARKAEKQSNPVKSDKVGGAKNLFKPDGTPYAPWMAVSAEYDASVIK---KRTDAVGKLAADPQSGELSGAGLSWKMLGD-ELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQP-GTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPMS 285
            E E+P  KEPYPGYF D++RMG+S E+A AQ R+  +   P K  K+GG  +L++PDGTPYAPWM    E + S  K    RTDA G+LA DPQ+ E++G GL  +++ D ++EL W T  E  N GF V RR GKS  W+ ++DY+  P  L SKG  GG Y F+ +  +  GTWVYRVSD+D +  VSDLSQ+LVE ES  + + Q + LAAL+    L   +   LDP+S
Sbjct:   64 ESELPPVKEPYPGYFRDLERMGVSREQAVAQLREKLESKRPPKDKKIGGKASLYRPDGTPYAPWMIGLVEEEPSKEKGLASRTDARGRLAGDPQAQEIAGIGLRARIVDDRDVELLWRTEGETNNAGFQVSRRRGKSTDWEVIADYKSAPDTLRSKGAQGGAYRFIDTPPEATGTWVYRVSDIDNSGEVSDLSQILVEFESEAERKRQLLVLAALIGTLLLIGTVTSMLDPLS 296          
BLAST of Gvermi12303.t1 vs. uniprot
Match: A0A1X6P4S7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4S7_PORUM)

HSP 1 Score: 196 bits (499), Expect = 1.660e-58
Identity = 101/206 (49.03%), Postives = 138/206 (66.99%), Query Frame = 0
Query:   81 SEEEAYAQARKAEKQSNPVKSDKVGGAKNLFKPDGTPYAPWMAVSAEYDASVIKK--RTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFL-VSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDP 283
            +E E    A   E    P K  KVGG K+L KPDGTPYAPWM    E  +    K  +TDA G+LA DPQ+GEL+G GL  ++LGDE++L+W TG+E  N GF V RRAGKSD W+ ++DY+  P+EL SKG +GG Y+F+  S+  PGTW+YRVSDV +   V+DL+Q +V++E + D   QK+ALA L+ +  +   +G++LDP
Sbjct:   51 AESETETAAEAPEGLVRPEKKGKVGGKKSLLKPDGTPYAPWMGGLVEEPSEFKAKAPKTDAKGRLANDPQAGELAGVGLKGRILGDEVDLRWDTGTEVNNLGFKVMRRAGKSDKWEFVADYQTAPSELQSKGSEGGSYTFIDSSNPPPGTWIYRVSDVSKEKKVNDLAQCMVDVEDSNDRSTQKVALAVLVVLGVVCVLLGVALDP 256          
BLAST of Gvermi12303.t1 vs. uniprot
Match: A0A5J4YVV1_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVV1_PORPP)

HSP 1 Score: 197 bits (502), Expect = 1.810e-58
Identity = 110/226 (48.67%), Postives = 137/226 (60.62%), Query Frame = 0
Query:   66 EPYPGYFADMKRMGLSEEEAYAQARKAEKQSNPVKSDKVGGAKNLFKPDGTPYAPWMAVSAE---YDASVIKK-RTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPMSST 287
            EPYPGY+ D++  G               ++ P ++ KVGG K+L    G PYAPWM    E   Y  S  K+ +TDA G+LA DPQ+ EL+G GL  K LGDELEL W TG E GN GF++ RR GK + ++ ++DY+  PA   SKGP GG YS+L    + GTWVYR+SDVDEN  VSDLSQ LVEIES ED + Q+IAL        + A IG   DP S T
Sbjct:   58 EPYPGYYKDLEASGA--------------KAMPKRAPKVGGRKSLLNAQGVPYAPWMRFREEDLDYKPSERKQPKTDARGRLAGDPQAQELAGTGLRAKFLGDELELAWQTGDETGNTGFILSRRRGKEEEFETVADYKSDPATFKSKGPAGGSYSYLCEKPEAGTWVYRISDVDENGAVSDLSQTLVEIESEEDQKKQRIALVVFGIFVVILAAIGFLADPESGT 269          
BLAST of Gvermi12303.t1 vs. uniprot
Match: M2W5F1_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5F1_GALSU)

HSP 1 Score: 189 bits (480), Expect = 5.490e-55
Identity = 103/225 (45.78%), Postives = 142/225 (63.11%), Query Frame = 0
Query:   65 KEPYPGYFADMKRMGLSEEEAYAQARKAEKQSNPVKSD--KVGGAKNLFKPDGTPYAPWMAVSAEYDASVI--KKRTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPMS 285
            KEPYPGY+ DM+++GL              +  P K D  KVGGAK+L++ DGTPYAPW+      D   +  +K+  A G+LAADPQ  E++G GL  ++LGDE+EL W+T  EE N GFVV RR G ++ +Q ++DY+  P+ L SKG  GG YSF+ S   PGTW+YR+SDV+     +DL Q LVEI S ED + QK+A+  L  +  +   +GL LDP++
Sbjct:   99 KEPYPGYYRDMEQLGL--------------KPQPQKDDGLKVGGAKSLYRADGTPYAPWLIGKVMEDPRPLTSRKKPSASGRLAADPQLQEIAGVGLKARILGDEVELVWSTDKEENNIGFVVQRRRGGTEDFQVIADYKTDPS-LKSKGSSGGNYSFIDSSASPGTWIYRISDVNAQGETNDLCQTLVEISSNEDKQRQKLAVIILSGLVIILFVVGLLLDPLT 308          
BLAST of Gvermi12303.t1 vs. uniprot
Match: D7FJQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ9_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 4.030e-40
Identity = 86/191 (45.03%), Postives = 116/191 (60.73%), Query Frame = 0
Query:  110 LFKPDGTPYAPWMA----------VSAEYDASVIKKRT---DAVGKLAADPQSGELSGAGLSWKMLGDEL-ELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPMSS 286
            +F  DG  YAPWM           V+A  +A   K+     +A+G LA DPQ  ELSGAGLS K + DE+ EL W TG+EEGN GF+V RRA K+D WQ+++ Y+D P  L SKGP GG Y++   ++  GTWVYR+SD+ ++   SDL Q L+E++S  D    KI +A L  +   AA  G  +DP +S
Sbjct:   79 MFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPP-LNSKGPGGGIYTYADDNVDLGTWVYRISDISKSGVKSDLCQTLIELQSGADELQTKIGVAGLAIVLIAAAAAGTFIDPFAS 268          
BLAST of Gvermi12303.t1 vs. uniprot
Match: A0A6V1RAY1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RAY1_HETAK)

HSP 1 Score: 147 bits (372), Expect = 1.710e-39
Identity = 81/187 (43.32%), Postives = 107/187 (57.22%), Query Frame = 0
Query:  108 KNLFKPDGTPYAPWM--------AVSAEYDASVIK--KRTDAVGKLAADPQSGELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYRDKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVEIESAEDTRIQKIALAALLAIXALAAFIGLSLDPM 284
            K +F  +G PYAPWM        A  A+ D    K  ++  A G L  DPQ+ ELSG GL  KM+GDE E+ W TG E GNKGF++ +R G SD WQ ++ Y D  A L SKGP GG+Y+++ SD + GTW+YRVSDV+     SDL Q LVE++        K     ++ +       GL LDP+
Sbjct:   72 KGMFNAEGKPYAPWMMDSVDAEKAKQAQEDRRARKAAEKKAAQGALLVDPQAMELSGVGLKTKMVGDECEISWGTGDETGNKGFIITKRRGGSDDWQVVASYTDW-APLNSKGPAGGQYTYMDSDTEQGTWIYRVSDVNTQGQTSDLCQALVEVQDQGQQMATKAFAVGIIGVFGALLAAGLFLDPL 257          
The following BLAST results are available for this feature:
BLAST of Gvermi12303.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMQ1_9FLOR1.370e-11877.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZH05_9RHOD6.550e-6448.23Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0T6E7_9RHOD1.010e-6353.33Hypothetical protein n=2 Tax=Erythrolobus madagasc... [more]
A0A7S1EU49_9RHOD3.710e-6244.78Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M1V5W6_CYAM11.240e-5948.07Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A1X6P4S7_PORUM1.660e-5849.03Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YVV1_PORPP1.810e-5848.67Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2W5F1_GALSU5.490e-5545.78Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
D7FJQ9_ECTSI4.030e-4045.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1RAY1_HETAK1.710e-3943.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 139..259
e-value: 4.9E-5
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..281
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..261
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 282..287
NoneNo IPR availableTMHMMTMhelixcoord: 262..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4142297..4143160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12303.t1Gvermi12303.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4142297..4143160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12303.t1 ID=Gvermi12303.t1|Name=Gvermi12303.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=288bp
MVAFVSVPFISSRGRFSQRSQCFLSSRPTTLRARRQWSMNNASEETSKQT
NPEPSSTPTEPEIPKEPYPGYFADMKRMGLSEEEAYAQARKAEKQSNPVK
SDKVGGAKNLFKPDGTPYAPWMAVSAEYDASVIKKRTDAVGKLAADPQSG
ELSGAGLSWKMLGDELELKWATGSEEGNKGFVVYRRAGKSDSWQKLSDYR
DKPAELASKGPDGGKYSFLVSDIQPGTWVYRVSDVDENDNVSDLSQVLVE
IESAEDTRIQKIALAALLAILALAAFIGLSLDPMSST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold