Gvermi12499.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12499.t1
Unique NameGvermi12499.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length376
Homology
BLAST of Gvermi12499.t1 vs. uniprot
Match: A0A2V3IIE2_9FLOR (Lactamase_B domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIE2_9FLOR)

HSP 1 Score: 506 bits (1303), Expect = 2.830e-177
Identity = 238/347 (68.59%), Postives = 285/347 (82.13%), Query Frame = 0
Query:   27 CIPAKECIASLNAGKTCALFPNPNRPVPLDAQGFNLTQIRKGVFSYSDGIYFSLIVYENKKLAIIDFPDIFSSVAPDGTYRLISAVRNVVGDSIPKKIFMIYSHFHVDHIGRAADMNSFLSHSYKAVPLQVVGTRDTFNFLQRNREDIPLPDLFVTPWKPLKIVFSRSLLLSLFILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFEKFISAQEDLLKLDFAVFTPGHGVIGSRQDVINNLDYSKFVLKAVRESAQELDPSVRVSVLQKFFNPDAFEYFNNPWAFGSLLGPQADLCFQKVISRWGCVLTGVDVVARDHCLLVALYDFSSTFAI 373
            C PA++CIA L  GK C LFPNP+RP PLD QGFNLT IR  VFSYSDGIYFS I+Y N KLA+IDFPD FSS+APDG+YRL++A+++V+G S P+KI+MIYSHFHVDH+GRAA +  F   SYK   +++VGTR+T NFL RNR+DIPLP +F +  KP  I FS +L L L ++GGH K D++ Y+ PSSDG GIVNLVDIINPKEAPLPQFTIAMNFEKFI AQ+ LLKLDF V  PGHG IGSR+DV NNL+Y KFVL+A RE+AQE DPSV+V+ +QKFFNP AFE+FNNPWAFG++L  QAD+CF+KVI RWGC+L GVDVVAR+HC +V+LYDFSSTF I
Sbjct:   27 CQPAEDCIALLADGKPCPLFPNPSRPSPLDPQGFNLTLIRPDVFSYSDGIYFSFIIYRNGKLAVIDFPDFFSSIAPDGSYRLLTAIQSVLGQSTPRKIYMIYSHFHVDHVGRAASVRDFFKQSYKGATVRIVGTRETKNFLLRNRDDIPLPQIFASRRKPFIISFSPTLCLKLLVIGGHVKSDLLGYVPPSSDGVGIVNLVDIINPKEAPLPQFTIAMNFEKFIVAQQQLLKLDFDVINPGHGFIGSRKDVENNLNYVKFVLQASREAAQEADPSVQVNTIQKFFNPSAFEFFNNPWAFGAILDAQADICFKKVIRRWGCILIGVDVVAREHCFIVSLYDFSSTFRI 373          
BLAST of Gvermi12499.t1 vs. uniprot
Match: A0A2V3IQ35_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ35_9FLOR)

HSP 1 Score: 310 bits (795), Expect = 1.550e-101
Identity = 147/221 (66.52%), Postives = 177/221 (80.09%), Query Frame = 0
Query:   27 CIPAKECIASLNAGKTCALFPNPNRPVPLDAQGFNLTQIRKGVFSYSDGIYFSLIVYENKKLAIIDFPDIFSSVAPDGTYRLISAVRNVVGDSIPKKIFMIYSHFHVDHIGRAADMNSFLSHSYKAVPLQVVGTRDTFNFLQRNREDIPLPDLFVTPWKPLKIVFSRSLLLSLFILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFE 247
            C PA++CIA L  GK C LFPNP+RP PLD QGFNLT IR  VFSYSDGIYFS I+Y N KLA+IDFPD FSS+APDG+YRL++A+++V+G S P+KI+MIYSHFHVDH+GRAA +  F   SYK   +++VGTR+T NFL RNR+DIPLP +F +  KP  I FS +L L L ++GGH K D++ Y+ PSSDG GIVNLVDIINPKEAPLPQFTIAMNFE
Sbjct:   27 CQPAEDCIALLADGKPCPLFPNPSRPGPLDPQGFNLTLIRPDVFSYSDGIYFSFIIYRNGKLAVIDFPDFFSSIAPDGSYRLLTAIQSVLGQSTPRKIYMIYSHFHVDHVGRAASVRDFFKQSYKGATVRIVGTRETKNFLLRNRDDIPLPQIFASRRKPFIISFSPTLRLKLLVIGGHVKSDLLGYVPPSSDGVGIVNLVDIINPKEAPLPQFTIAMNFE 247          
BLAST of Gvermi12499.t1 vs. uniprot
Match: R7QTP3_CHOCR (Lactamase_B domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTP3_CHOCR)

HSP 1 Score: 177 bits (450), Expect = 4.890e-48
Identity = 110/353 (31.16%), Postives = 176/353 (49.86%), Query Frame = 0
Query:   25 AQCIPA------KECIASLNAG-KTCALFPNPNRPV--PLDAQGFNLTQIRKGVFSYSDGIYFSLIVYENKKLAIIDFPDIFSSVAPDGTYR-LISAVRNVVGDSIPKKIFMIYSHFHVDHIGRAADMNSFLSHSYKAVPLQVVGTRDTFNFLQRNREDIPLPDLFVTPWKPLKIVFSRSLLLSLFILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFEKFISAQEDLLKLDFAVFTPGHGVIGSRQDVINNLDYSKFVLKAVRESAQELD-PSVRVSVLQKFFNPDAFEYFNNPWAFGSLLGP-QADLCFQKVISRWGCVLTGVDVVARDHCLLVALY 365
            AQC+ A      + C   L+ G + C LFP P R +   L    F L+Q+RKGVF Y +  Y SLI+  +++LA++D P+  S   PDG      SA   V+  +IPK+I ++YSH H DHIG      +++   Y +  + + GT      ++ +     +    +   +   +     L + + I+GGHT  D+  YI    D P I+  VD++ P  AP     +  +   ++   E+LLK DF +F  GH  +G R+ V  N  YSK +++A   +  E+       +   +F +P A E+ N  +AF S+    Q + C++ +I +WGC L G+D+V R HC     Y
Sbjct:   82 AQCVDAELARAARACSRRLSLGQRQCRLFPTPERSIIRSLRPGDFRLSQLRKGVFLYDNSFYTSLILKMDRRLALLDIPESISLDGPDGNRTSFASAAEQVLNGTIPKRIDIVYSHGHFDHIGGTTRFVAYMEERYPSASIFIWGTSTARVLIENSVTKRAIFPNVIVGRRGRTLSLGEGLDVRMQIVGGHTASDLALYIPRFRDEPSILMHVDVVFPNWAPPFNLAVTEDVGGYVRVHEELLKFDFDIFISGHWSVGDRKSVEMNHGYSKDLVQAAITALDEVTIEDFNEAGFGRFIDPTAREFGNVLYAFVSVSRRVQIEACYRIIIDKWGCRLPGLDLVGRGHCFTALTY 434          
BLAST of Gvermi12499.t1 vs. uniprot
Match: R7QAR5_CHOCR (Lactamase_B domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAR5_CHOCR)

HSP 1 Score: 145 bits (367), Expect = 1.770e-37
Identity = 81/280 (28.93%), Postives = 151/280 (53.93%), Query Frame = 0
Query:   90 IIDFPDIFSSVAPDGTYRLIS-AVRNVVGDSIPKKIFMIYSHFHVDHIGRAADMNSFLSHSYKAVPLQVVGTRDTFNFLQRNRED-IPLPDLFVTPWKPLKIVFSRSLLLSLFILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFEKFISAQEDLLKLDFAVFTPGHGVIGSRQDVINNLDYSKFVLKAVRES-AQELDPSVRVSVLQKFFNPDAFEYFNNPW-AFGSLLGPQADLCFQKVISRWGCVLTGVDVVARDHCLLVALY 365
            ++D  + F+S  P+G+  L + A   V+  ++P++I +IYSH H+DHIG       ++   Y    + V GT+++   ++++  D  P+PD+ +   +   +     L ++++I+GGHT  D+V +I        IV  VD++ P  +P     I  +   +I AQ+++LKLDF VF  GH V+G RQ V  N+ +++ +++A + + A+        +  ++F +PDA EY N  +    +    Q D+C++ ++ +WGC + G D+  + HC     Y
Sbjct:    1 MVDIAESFNSNKPNGSQTLYTDAAEKVLNGTVPRRIDIIYSHGHLDHIGSTNRFIRYMERQYPRSRIVVWGTQESKEVIEKSVTDKAPIPDVIIGK-RGRTLALGEGLSVNMWIVGGHTASDLVIHIPRYEREVPIVYYVDVVFPGWSPTFNLAITNDVGSYIGAQKEVLKLDFEVFVGGHFVLGDRQSVATNVAFAEDLVEAAKVAIAETSQEDFDAAGFKRFSDPDAREYGNPLFLVMTTFRQTQVDVCYRIMLEKWGCRIAGFDISGKGHCFTALAY 279          
BLAST of Gvermi12499.t1 vs. uniprot
Match: A0A6L9EY69_9FLAO (MBL fold metallo-hydrolase n=1 Tax=Flavobacteriaceae bacterium R38 TaxID=2697054 RepID=A0A6L9EY69_9FLAO)

HSP 1 Score: 65.1 bits (157), Expect = 2.890e-8
Identity = 56/204 (27.45%), Postives = 91/204 (44.61%), Query Frame = 0
Query:  125 FMIYSHFHVDHI--GRAADMNSFLSHSYKAVPLQVVGTRDTFNFLQRNREDIPLPDLFVTPWKPLKIVFSRSLLLSLFILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFEKFISAQEDLLKLDFAVFTPGHGVIGSRQDVINNLDYSKFVLKAVRE------SAQELDPSVRVSVLQKFFNPDAFEYFN 320
            ++IYSH+H DH+  G+  D   F+ H  K     ++           N+ + P+PD      K +K+   +   + L   G    ED +A   P       V  VD I+    P      A     +I A +++ KLDF VF+PGHG IG++ DV  + +Y + +  AV+E      S  E+  ++ +   +K    DA+   N
Sbjct:   80 YVIYSHYHDDHVSGGKVFDEAKFIGH--KLTKKNIID----------NKIETPVPDETFAKKKTIKLGGKK---VELLYPGKSHSEDCIAVFFPEEK---TVFGVDFISVDRLPYRTLNGAF-IPDWIEAIKEVEKLDFTVFSPGHGDIGTKTDVKEHREYFETLYAAVKEAKSKGKSLSEMKKTILLEQYKKMSQYDAWREMN 264          
BLAST of Gvermi12499.t1 vs. uniprot
Match: A0A8J3AR47_9BURK (Hydrolase glyoxylase n=1 Tax=Oxalicibacterium faecigallinarum TaxID=573741 RepID=A0A8J3AR47_9BURK)

HSP 1 Score: 58.9 bits (141), Expect = 3.730e-6
Identity = 58/240 (24.17%), Postives = 104/240 (43.33%), Query Frame = 0
Query:   61 NLTQIRKGVFSYSDGIYFSLIVYENKKLAIIDFPDIFSSVAPDGTYRLISAVRNVVGDSIPKKIFMIYSHFHVDHIGRAA---DMNSFLSHSYKAVPLQVVGTRDTFNFLQRNREDIPLPDLFVTPWKPLKIVFSRSLLLSLFILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFEKFISAQEDLLKLDFAVFTPGHGVIGSRQDVINNLDYSKFVLKAVRESAQE 297
            ++T +   ++ + D +++S+ +   + L + D       ++ D    L   +R   GD +P K ++IYSH H+DH+       D  +F     KA              L+RNR    +P    T +     +      ++L   G +     ++   P +     + +VD I  K  P  +     +FE  I++ + +L+LDF    PGH V+G++ DV  NL Y + +  AV E   E
Sbjct:   29 SITDLGNNIYRFQDNMHYSVFIVGKQGLLMTD------PISSDAATWLRKEIRQRFGD-LPIK-YVIYSHNHLDHVAGGEVFRDAGTFFIAHEKAA-----------EDLKRNRAQTVIP---TTTFSDRMEIDFEGRRIALQYYGPNNGAGNISMYVPDAK---FLFVVDWIILKRLPFKEMYY-YDFEGSIASLKQVLQLDFDKVAPGHSVVGTKNDVRENLAYLEDLRDAVLEGMNE 242          
BLAST of Gvermi12499.t1 vs. uniprot
Match: UPI00101D946C (MBL fold metallo-hydrolase n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00101D946C)

HSP 1 Score: 55.8 bits (133), Expect = 9.100e-6
Identity = 39/152 (25.66%), Postives = 70/152 (46.05%), Query Frame = 0
Query:  126 MIYSHFHVDHIGRAADMNSFLSHSYKAVPLQVVGTRDTFNFLQRNREDIPLPDLFVTPWKPLKIVFSRSLL-LSLFILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFEKFISAQEDLLKLDFAVFTPGHGVIGSRQD 276
            ++YSH+HVDHIG +   N       + V L+++ ++ T   +Q     +P+    ++  K  +  F +  + L  F+  GHT +  V  +        + +  D++NP + P+  F ++       S    +  LD+  F  GHG IGS  D
Sbjct:    8 LVYSHYHVDHIGDSPFWND--EAKKEGVNLRIIASKATAEKMQFMNSRLPVATQVLSK-KDDQFKFEKQTIELHRFVKAGHTDDHSVWLLKQEK----VAHSPDLLNPDQLPMMGFAVSDTLVYHDSNLRQVEMLDWKYFIGGHGNIGSHDD 152          
The following BLAST results are available for this feature:
BLAST of Gvermi12499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IIE2_9FLOR2.830e-17768.59Lactamase_B domain-containing protein n=1 Tax=Grac... [more]
A0A2V3IQ35_9FLOR1.550e-10166.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTP3_CHOCR4.890e-4831.16Lactamase_B domain-containing protein n=1 Tax=Chon... [more]
R7QAR5_CHOCR1.770e-3728.93Lactamase_B domain-containing protein n=1 Tax=Chon... [more]
A0A6L9EY69_9FLAO2.890e-827.45MBL fold metallo-hydrolase n=1 Tax=Flavobacteriace... [more]
A0A8J3AR47_9BURK3.730e-624.17Hydrolase glyoxylase n=1 Tax=Oxalicibacterium faec... [more]
UPI00101D946C9.100e-625.66MBL fold metallo-hydrolase n=1 Tax=Escherichia col... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001279Metallo-beta-lactamaseSMARTSM00849Lactamase_B_5acoord: 75..268
e-value: 3.2E-6
score: 36.7
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 60..294
e-value: 2.3E-15
score: 58.6
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 57..342
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..375
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5619904..5621031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12499.t1Gvermi12499.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5619904..5621031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12499.t1 ID=Gvermi12499.t1|Name=Gvermi12499.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=376bp
MAAALIILPMLLPLLVATPISDRPAQCIPAKECIASLNAGKTCALFPNPN
RPVPLDAQGFNLTQIRKGVFSYSDGIYFSLIVYENKKLAIIDFPDIFSSV
APDGTYRLISAVRNVVGDSIPKKIFMIYSHFHVDHIGRAADMNSFLSHSY
KAVPLQVVGTRDTFNFLQRNREDIPLPDLFVTPWKPLKIVFSRSLLLSLF
ILGGHTKEDIVAYISPSSDGPGIVNLVDIINPKEAPLPQFTIAMNFEKFI
SAQEDLLKLDFAVFTPGHGVIGSRQDVINNLDYSKFVLKAVRESAQELDP
SVRVSVLQKFFNPDAFEYFNNPWAFGSLLGPQADLCFQKVISRWGCVLTG
VDVVARDHCLLVALYDFSSTFAISH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR036866RibonucZ/Hydroxyglut_hydro