Gvermi12335.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12335.t1 vs. uniprot
Match: A0A2V3IHE8_9FLOR (HIT-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHE8_9FLOR) HSP 1 Score: 301 bits (770), Expect = 1.130e-94 Identity = 171/391 (43.73%), Postives = 248/391 (63.43%), Query Frame = 0
Query: 37 SDSEESEQPLRSLSKGENEPHVLEQLLNAMNDDEKETFFSMFNVLMERACGSRSVPPKDGSGKGSQGTLIGSSSTCNPAGSLNDSSG--GFDCGEQQQETD------------SKREDIADTLEDLVQDMEELNLTYEQILSKLPRELADKFFDHLKEASFHETLKPWRPWW--------HVSRDDDGDDEEAIEP---PPLPKAEELVVSPEVPKRAASPLLINCVIDVLNAICLSLRLYDGDCLSDAFHAAKAIWRLSPTLSADDRYTTVSQACRACIEVVSKCYGREVALATLEDAACVLGGCSDWVTRCLFYGQTVLREGRKVVRVQGGRRAIKWGTKKIGFMVAWALCQESFVFTHAARSVGSFVEMERGRCEELRVAKRVVRLVS 402
SD+ +SE+P NEPHVLE+L++++++ ++ F++ + MERACGS S PP GKG + +L+DS+ GF Q+T+ ++ ED LE+LV+DMEE ++Y++ILS+LP + D+F + +K+ + HETLKPW PWW V+ + + DE+ EP PPLPK +L+V+PE+P+ ASP +IN VIDVL +ICL+LRL+DGDCLSDA HAA+ +W S LS+D RY T +QAC AC++ +S+ +A + L+D A VLGG DWV+RCLFYGQ++L+ V + R+ IK +K+G++VAW+LCQ S F A+R V SFVE+E+GR EELR+A+RVV+ V
Sbjct: 91 SDTGQSEEPSAEDENNSNEPHVLEELIDSLDEAGRDALFTVLHSAMERACGSES-PPNRERGKGEDPDAPNKPQRTH---TLDDSAAKTGFAIRGSLQKTEKQGDRRKENTFETRPEDTVTVLEELVEDMEEREVSYDEILSRLPSHIVDEFHEKMKQHNLHETLKPWTPWWCVGHRIEEQVTLNTECADEQYPEPAALPPLPKKSDLLVTPEIPQFNASPYVINSVIDVLASICLTLRLHDGDCLSDASHAARTMWNYSSVLSSDARYKTENQACWACVQAISETDDNHLAFSILQDVALVLGGSCDWVSRCLFYGQSLLQASLNEVVDKNSRKIIKRRMRKVGYLVAWSLCQPSSKFGDASRRVDSFVEIEQGRREELRIARRVVQQVK 477
BLAST of Gvermi12335.t1 vs. uniprot
Match: R7Q3D1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3D1_CHOCR) HSP 1 Score: 185 bits (469), Expect = 3.730e-50 Identity = 126/355 (35.49%), Postives = 191/355 (53.80%), Query Frame = 0
Query: 56 PHVLEQLLNAMNDDEKETFFSMFNVLMERACGSRSVPPKDGSGKGSQGTLIGSSSTCNPAGSLNDSSGGFDCGEQQQETDSKREDIAD----TLEDLVQDMEELNLTYEQILSKLPRELADKFFDHLKEASFHETLKPWRPWW-HVSRDD----DGDDEEAIEPPPLPKAEELVVSPEVPKRAASPLLINCVIDVLNAICLSLRLYDGDCLSDAFHAAKAIWRLSPTLSADDRYTTVSQACRACI-EVVSKCYGREVALATLEDAACVLGGCSDWVTRCLFYGQTVLREGRKVVRVQGGRRAIKWGTKKIGFMVAWALCQESFVFTHAARSVGSFVEMERGRCEELRVAKRVVRL 400
P +LEQ +N+++D KE F SM + + +++ + G G S +G + +PAG + Q + + + AD LE+L DME +L+Y++IL +LP E+A F L + L+ WRPWW + DD DG D E PPLP + L+V V +RA SP ++N V +VL A C+SLRL +GD SD H A+ IW S LS D RY ++ +AC + + ++V + AL D + V+ G S+WV R L+ Q + E G++ ++ +KI ++V+WALCQ++ AAR+V S+ E+ERGRCEE+RVA +RL
Sbjct: 120 PELLEQFINSLDDQGKE-FVSMIDKGVRERLEEQNLLAR-GEGAASLIPDVGKEAPSSPAGRK----------KAQHDLPANAPESADGVTEKLEELTHDMEAQDLSYDEILRRLPEEMARDFEARLLDGRASRMLQLWRPWWIFLPVDDVVENDGSDGSVAELPPLPSPDSLIVPISVSRRA-SPTIVNNVSEVLGAYCMSLRLCNGDWHSDPSHVARKIWEFSSVLSDDRRYASMEEACTSSMGKLVQVGKSQAAALEAFNDVSAVISGRSEWVARALYECQGIF-EAALAEAPAMGKKPLRARVRKIAYLVSWALCQDTSALVIAARAVLSYAELERGRCEEVRVAGEAIRL 460
BLAST of Gvermi12335.t1 vs. uniprot
Match: A0A166A936_DAUCS (HIT-type domain-containing protein n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166A936_DAUCS) HSP 1 Score: 61.6 bits (148), Expect = 1.040e-6 Identity = 59/240 (24.58%), Postives = 107/240 (44.58%), Query Frame = 0
Query: 187 LKPWRPWW--------HVS------------------RDDDGDDEEAIEPPPLPKAEELVVSPEVPKRAASPLLINCVIDVLNAICLSLRLYDGDCLSDAFHAAKAIWRLSPTLSADDRYTTVSQACRACIE-----VVSKCYGREVALATLEDAACVL--GGCSDWVTRCLFYGQTVLREGRKVVRVQGGRRA--------IKWGTKKIGFMVAWALCQESFVFTHAARSVGSFVEMER 385
++PW PWW H+S + + ++++++ PP P+ VS ++ A SPLL ++D++ + C +LRLY+G+ L+D + +S L + TVS+A C+E V+ G + L L+D C+L GG + C F Q +++ K ++ + R++ +K +K+ FM+ W Q + S+ S VE E+
Sbjct: 162 IEPWEPWWLKPSAKTIHLSEQGSRLVQPIVRHESIASKSEIVENDQSLHIPPGPETPLPPVS-KLSATAPSPLLAVHLVDIIYSYCFTLRLYNGEWLTDPIGSVMHALSVSLVLGQGGKPETVSEAVSHCLEQTCSPVLRHVGGLQFGLGLLDDVVCLLSIGGTALVCLLCDF--QRMIQAAEKELKSEKPRKSRRVEAKGNLKSAERKVYFMMCWVHEQHEDTWF----SIASMVEAEK 394
BLAST of Gvermi12335.t1 vs. uniprot
Match: M5WUD7_PRUPE (HIT-type domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=M5WUD7_PRUPE) HSP 1 Score: 59.7 bits (143), Expect = 4.180e-6 Identity = 58/241 (24.07%), Postives = 103/241 (42.74%), Query Frame = 0
Query: 185 ETLKPWRPWW--------------------------HVSRDDDGDDEEAIEPPPLPKAEELVVSPEVPKRAASPLLINCVIDVLNAICLSLRLYDGDCLSDAFHAAKAIWRLSPTLSADDRYTTVSQACRACIE-----VVSKCYGREVALATLEDAACVLGGCSDWVTRCLFYGQTVLREGRKVVRVQGGRRA--------IKWGTKKIGFMVAWALCQESFVFTHAARSVGSFVEMERG 386
+ +KPW PWW +S +DD + +A E PP P VS ++ SP L ++D++ + C +LRLY+GD LSDA +A + +S L + TV +A C+E + G + L ++D +L + + L Q +++ G + ++ + R++ +K +KI F++ W Q A S+ + V+ E+G
Sbjct: 146 KMIKPWDPWWLKPSARAITFSKEGTQLIKPLANEEESMSTEDDLESNQASEIPPGPDTPLPPVS-KLSSTKPSPTLAVHLVDIIYSYCFTLRLYNGDWLSDATGSAMVLLSVSSVLGQGGQPETVLEALSYCLEQTCSPAFRQMGGLQFGLGLIDDVITLLTLGTPALLCLLSDLQRMVQAGERELKSEKPRKSRRAEIRSKLKVAERKIYFIMCWVHEQPG----EAWSSLAAIVKAEKG 381 The following BLAST results are available for this feature:
BLAST of Gvermi12335.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12335.t1 ID=Gvermi12335.t1|Name=Gvermi12335.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=406bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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