Gvermi12312.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12312.t1
Unique Name	Gvermi12312.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	513

Homology

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BLAST of Gvermi12312.t1 vs. uniprot
Match: A0A2V3J0A0_9FLOR (Senescence domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0A0_9FLOR)

HSP 1 Score: 434 bits (1115), Expect = 3.080e-144
Identity = 251/438 (57.31%), Postives = 307/438 (70.09%), Query Frame = 0

Query:   16 SLHPAPTTPTPAAPPRXXLAIPTSYPQPGRXXXTSSASAPSSVASSHPPRPKSAPSKPVNSEALPPAFEALIQLDASIYEKINPETTPPQHSD--GVPPLPPPQPSAPLLVIQGPLAPDPQ--SSEMLYYAFINTRSFNFPLMPSTTCRRIGPKAFRIKVDRRRFVIMLAPSTNLKMVEGFIALLQWFCTWKDAEGSHIPARMDESLSSVSPGSSSSQGG----SAFLEKVGDKSVQKIEKLADRVNNKTQRWLDKRHVAAAETRERGGGKNLSLGGKVTIGALNATQKVVETTAKVTGAATDKIASTVGRSVTKTVTKPLANAPNGSKRRTFYEKLASGCLTAGRIYVTADRQARLYVANSVDSAALVTGAKYGSEAEHACRQLGKISVDAVRVWKFPSDLGFKSIMQAGMEEELKRKGESPRPP----PPPTYANE 441
            SLHP  T P    PP+    +P+SYPQPG XXX            +H  RP SAP++P+ SE LPP FE LI+L+A+I EK++P T  PQH +  GVPPLPPPQPSAPLLVIQGPLA DP   ++ MLYYAFINTRS+NFPLMPST+CRRI   AFRI+VD RRFV+ L PST  K VEGFIALLQWFCTWK+ EGS  PAR+ ES +S               S    K+GD  V  IEK+++R NN TQR+L ++H  A   R RG  K+L++GG+ T G L  TQKVV   AKV  A TDKIA TVGR VTKTV KPLA+AP  S RR FY+++ASGCL AGRIYV+ D+  RL++AN+ D+AALV GAKYG +AEHA RQ+ +I+ DA  V KFPS+LG+KS+M++ +EEELKRKG+   P     PPP++ANE
Sbjct:   23 SLHPNITNPPSPKPPQP---VPSSYPQPGXXXXXXXXXXXXXXXXTH--RPHSAPAEPLQSEPLPPGFEVLIELNATITEKLHPNT--PQHHNFHGVPPLPPPQPSAPLLVIQGPLATDPSQPNANMLYYAFINTRSYNFPLMPSTSCRRIAQDAFRIRVDNRRFVVALHPSTPPKHVEGFIALLQWFCTWKEPEGSLPPARLSESTTSXXXXXXXXXXXXXPKSTVFTKIGDNVVDVIEKVSNRANNTTQRYLSEKHSTAVSNRNRGAAKDLNIGGRATAGVLGTTQKVVGAVAKVAVATTDKIACTVGRRVTKTVAKPLASAPERSIRRGFYDQIASGCLAAGRIYVSVDKNVRLFMANTGDTAALVAGAKYGPQAEHASRQIAQIAYDAYHVMKFPSELGYKSLMKSSVEEELKRKGDDTTPDDQVQPPPSWANE 453

The following BLAST results are available for this feature:

BLAST of Gvermi12312.t1 vs. uniprot

BLAST of Gvermi12312.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0A0_9FLOR	3.080e-144	57.31	Senescence domain-containing protein n=1 Tax=Graci...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..465
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..494
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	PANTHER	PTHR13037	FORMIN	coord: 5..480

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:4167345..4168883 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12312.t1	Gvermi12312.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 4167345..4168883 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12312.t1 ID=Gvermi12312.t1|Name=Gvermi12312.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=513bp
MSRSASGNPPPVSDHSLHPAPTTPTPAAPPRPPLAIPTSYPQPGRPGRTS
SASAPSSVASSHPPRPKSAPSKPVNSEALPPAFEALIQLDASIYEKINPE
TTPPQHSDGVPPLPPPQPSAPLLVIQGPLAPDPQSSEMLYYAFINTRSFN
FPLMPSTTCRRIGPKAFRIKVDRRRFVIMLAPSTNLKMVEGFIALLQWFC
TWKDAEGSHIPARMDESLSSVSPGSSSSQGGSAFLEKVGDKSVQKIEKLA
DRVNNKTQRWLDKRHVAAAETRERGGGKNLSLGGKVTIGALNATQKVVET
TAKVTGAATDKIASTVGRSVTKTVTKPLANAPNGSKRRTFYEKLASGCLT
AGRIYVTADRQARLYVANSVDSAALVTGAKYGSEAEHACRQLGKISVDAV
RVWKFPSDLGFKSIMQAGMEEELKRKGESPRPPPPPTYANEPAHSLLISP
TPKDSVPSASSQAPVSNPPSFPPTPSSFTPPAANDLQMISHVPDETVMHV
PFQNLSVNLPKK*