Gvermi12404.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12404.t1
Unique NameGvermi12404.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length505
Homology
BLAST of Gvermi12404.t1 vs. uniprot
Match: A0A2V3IK64_9FLOR (Polyadenylate-binding protein RBP45A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK64_9FLOR)

HSP 1 Score: 801 bits (2070), Expect = 3.110e-289
Identity = 411/505 (81.39%), Postives = 443/505 (87.72%), Query Frame = 0
Query:    1 MPPATAPMSSSPPPANSRPANGTISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERIPATKPPPPLVSSDMPVMNYEPNSQPFDPQFSSSYASNTTGANNSIQEGFNNFHSMPNGSSPSSGANPSVVGLSQPQP-GSVEDNKVSVAGASAVTAMQTAAPVVKNETSPVENGNSNGSGEAEPPSKRAAVGRSEYAAVAAENTPKKDNVLDVKADAPSGDSPAMQFSWLNSSSTQPTSSPQ 504
            MPPATAP SSSPPP NSRP+NGTISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVN +A TEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDA+RAV EMQGFEFN+KPIRLSHATGRSRGPN+                      PPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRE+A+RAKESLSGTHF PLNAHKPIRVEWASERIPATKPP  LV++ MPVMNY+ NSQ FDPQFSSSYA N   +N+SIQEGFNNF+S+PNGSS +  ++ +V GLSQPQP  SVE+NKVS A  + V ++Q +APV K      ENGNSNGSGEAEPPSKRAAVGR EYAAVA ++TPKK+N ++VK++ PSGDSPAMQFSWLNSSSTQPT++ Q
Sbjct:   31 MPPATAPHSSSPPPNNSRPSNGTISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNSSANTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDADRAVNEMQGFEFNNKPIRLSHATGRSRGPNTRGPTHHPYNNHHNTPSNGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTREAALRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPS-LVNTSMPVMNYDSNSQSFDPQFSSSYALNNPASNSSIQEGFNNFNSIPNGSSTAPVSSTAVAGLSQPQPPASVEENKVSAADGATVASVQPSAPVSKETPVTSENGNSNGSGEAEPPSKRAAVGRGEYAAVATDSTPKKENGIEVKSEGPSGDSPAMQFSWLNSSSTQPTTNSQ 534          
BLAST of Gvermi12404.t1 vs. uniprot
Match: R7QS10_CHOCR (Putative mRNA binding post-transcriptional regulator (Csx1) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS10_CHOCR)

HSP 1 Score: 541 bits (1394), Expect = 1.660e-184
Identity = 322/522 (61.69%), Postives = 362/522 (69.35%), Query Frame = 0
Query:    9 SSSPPPA--NSRPA---NGTISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVN----GTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXX-APPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERIPATKPPPPLVSSDMPVMNYEPNS-QPFDPQFSSSYASNTTGANNSIQEGFNNFHSMPNGSSPSSGANPSVVGLSQPQPGSVEDNKVSVAGASAVTAMQ-TAAPVVKNETSPVENGNSNGS--------------GEAEPPSKRAAVGRSEYAAVAAENTPKKDNVLDVKADAPSGDSPAMQFSWLNSSSTQPTSSPQ 504
            SSSP P    S P      +ISIWAGDLDAYMDENFLRQAV ASGW  DITRIKVVRDHY+GMHAGYGFLDAASPEAA+RVIA GSG+PIPGTNRCWRLNMGRNAAV+      AGTEINIYVGNLEPSVTDYQLMTAFRPRY SVRHAKVVCNEYGQSRG+GFVRFAN  DAERAV+EMQGFEFNSKPIRLS ATGR+RGP +   XXXXXX               P NKRPRQ+M+PDDP NTTIFIGGT  HIT++LLWREFS+FGELD VRVPVNKTGFAFVRFK RE A RAKE LSG+H+  LN +KP+RVEWASE+I  TKPPP     +MP+M     + Q FDPQ++ S  +N+ G N +  +     H   + SSPSS          Q                    +M  TA  V KN+ S   N  ++G+              GE EPPSKRAAVGR EY    A+N   K+ + D KA   + DSPAMQFSWLN+SSTQP S+PQ
Sbjct:  172 SSSPTPGALGSSPGARQGSSISIWAGDLDAYMDENFLRQAVAASGWAQDITRIKVVRDHYTGMHAGYGFLDAASPEAAERVIATGSGLPIPGTNRCWRLNMGRNAAVHTHPGSAAGTEINIYVGNLEPSVTDYQLMTAFRPRYTSVRHAKVVCNEYGQSRGFGFVRFANPQDAERAVSEMQGFEFNSKPIRLSPATGRNRGPGAGRGXXXXXXYNNHGQPPHSGGHGAPNNKRPRQVMSPDDPNNTTIFIGGTGNHITEDLLWREFSAFGELDAVRVPVNKTGFAFVRFKRREDAQRAKEELSGSHYVTLNPNKPVRVEWASEQIAITKPPP---VQNMPLMYSSGGAAQSFDPQYNPSTYNNSPGVNQAPGQ-----HPFGSYSSPSS----------QXXXXXXXXXXXXXXXXXXXXSMNSTANGVTKNDESSTGNDMTSGASPAKDGATAKADAHGETEPPSKRAAVGRPEYTGSGADNG-VKEGLNDTKAAGVADDSPAMQFSWLNASSTQPASNPQ 674          
BLAST of Gvermi12404.t1 vs. uniprot
Match: A0A7S1TAX1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAX1_9RHOD)

HSP 1 Score: 321 bits (823), Expect = 8.600e-101
Identity = 168/362 (46.41%), Postives = 229/362 (63.26%), Query Frame = 0
Query:   25 SIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRN-------------------AAVNGTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSR--GPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERIPATKPPPPLVS-------SDMPVMNYEPNSQPFDPQFSSSYA 358
            S+W GDLDAYMDE FLR AV   GWGPDI+RIKVVRD  +G HAGYGF +  + EAA++++  G+G+PIPGTNR WRLNMGR+                   +AV+     + N+YVG+L+ +VT+++L++AFR +Y SV+HA+++C+++G+SRG+ F+RF +A DA++AV EM G E   + I+++H   RS    P+S                     AP   KRPR     DDP N+T+F+GGT  HITDE+L+REF  FGE++ V+VPVNK GFAFVRFK RE A+RA ESL+G     LN  K +R+EWASE++P    P P VS       S +P M   P +  FD  + +S A
Sbjct:  111 SVWVGDLDAYMDETFLRSAVNVMGWGPDISRIKVVRDRSNGTHAGYGFFETTTTEAARKLLTSGNGLPIPGTNRSWRLNMGRSGGSSGDGTASLGFQGRPEGSAVSSQRSGDANVYVGDLDAAVTEFELLSAFRLKYASVKHARILCDDHGRSRGFAFIRFGDAEDADKAVEEMNGQEIRGRAIKVNHPKSRSGVGDPSSGTSNGA---------------AP--GKRPRPNHGKDDPNNSTVFVGGTGAHITDEVLYREFGRFGEIETVKVPVNKVGFAFVRFKNREDALRAIESLTGKLVDSLNHQKAVRLEWASEQLPIPNRPVPAVSHAPVSQTSMVPTMIAAPQTMGFDQNYMASLA 455          
BLAST of Gvermi12404.t1 vs. uniprot
Match: A0A7S0G195_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G195_9RHOD)

HSP 1 Score: 302 bits (773), Expect = 1.870e-94
Identity = 157/309 (50.81%), Postives = 200/309 (64.72%), Query Frame = 0
Query:   16 NSRPANGTISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVV-RDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERI 323
            N R A  T S+W GDLD YMDE+FLR+AV + GWG  I RIKVV R+H +  HAGY F D  S EAA+ ++  G+G PIPGT R WRLN+G+       +G E N+YVG++ PSVTD+ LM  F+ +Y SVRHAKVVC++ G  +GY FVRF +A ++ERAV+EM GFE   K + L+ A       N                      A  + KRPR  +AP DP NTT+F+GGT P++ +  LWREFS FGEL  VR+PV + GFAFVRF+TRESA+ AK +L G H   LN  KPIR+EWA+E+I
Sbjct:   44 NGRFAQET-SMWVGDLDGYMDEDFLRRAVNSCGWGNQIARIKVVTRNHGNRAHAGYAFFDCVSEEAARTIMETGNGTPIPGTTRIWRLNLGKEGPQR--SGIEANVYVGDVAPSVTDFALMQLFKAKYPSVRHAKVVCDDNGNPKGYAFVRFGSAQESERAVSEMDGFELEGKKVHLNLA-------NRPKPSRGDRRNSSNYGSSRGGRAGASGKRPRNPIAPGDPNNTTLFLGGTGPYLQEADLWREFSVFGELIAVRLPVQRKGFAFVRFRTRESAMNAKNALGGQHVASLNNVKPIRIEWATEQI 342          
BLAST of Gvermi12404.t1 vs. uniprot
Match: A0A5J4YRZ5_PORPP (Polyadenylate-binding protein RBP47C n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRZ5_PORPP)

HSP 1 Score: 256 bits (654), Expect = 2.230e-75
Identity = 149/343 (43.44%), Postives = 196/343 (57.14%), Query Frame = 0
Query:   21 NGT-ISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGR---------------------NAAVNGTA-------------GTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPR-QLMAPDDPTN---TTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERIP 324
            NGT +SIW GDLD YMDE FL  AV ++GW   + R+KV+R   SG HAGYGFL   S EAAQ +I  G+G+PI  TNR WRL MGR                     N A +G A              TE N+YVG+L+P+V+DY+L+  FR R+ SVRHAKV+C+E GQSRGYGF+RF++  DA+ AV    G     +PIR++ A   S G ++                      P   KR R Q   P   T+   TT+F+GGT P I +  LW EFS+ G +  V++P++KTGFAFVRF TR  A  AK +L+ +    +N H+ IRVEWA+E++P
Sbjct:  146 NGTQVSIWVGDLDPYMDERFLTNAVASAGWTEHVQRVKVIR-RSSGAHAGYGFLVVHSMEAAQHIIQFGNGLPIAMTNRSWRLQMGRVSGGSGDDVGMDQMQQHGQHWNRAASGDAVAGDAAGRGGWQPATEANLYVGDLDPAVSDYELLNYFRARFASVRHAKVMCDEVGQSRGYGFIRFSSMADAQEAVKLFNGTMIRGRPIRVNLAHRSSGGQSNDSRGGGGGNVNGGTH-------PNGPKRRRDQGSVPSGVTDESITTLFVGGTIPSIQEGTLWEEFSAHGTVQAVKLPISKTGFAFVRFATRADAESAKNALNMSSVPSINPHRAIRVEWAAEQLP 480          
BLAST of Gvermi12404.t1 vs. uniprot
Match: A0A5J4YS19_PORPP (Polyadenylate-binding protein RBP47C n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS19_PORPP)

HSP 1 Score: 247 bits (631), Expect = 3.980e-74
Identity = 141/311 (45.34%), Postives = 189/311 (60.77%), Query Frame = 0
Query:   21 NGT-ISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNG--TAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPR-QLMAPDDPTN---TTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERIP 324
            NGT +SIW GDLD YMDE FL  AV ++GW   + R+KV+R   SG HAGYGFL   S EAAQ +I  G+G+PI  TN      +  +AA  G     TE N+YVG+L+P+V+DY+L+  FR R+ SVRHAKV+C+E GQSRGYGF+RF++  DA+ AV    G     +PIR++ A   S G ++                      P   KR R Q   P   T+   TT+F+GGT P I +  LW EFS+ G +  V++P++KTGFAFVRF TR  A  AK +L+ +    +N H+ IRVEWA+E++P
Sbjct:    2 NGTQVSIWVGDLDPYMDERFLTNAVASAGWTEHVQRVKVIR-RSSGAHAGYGFLVVHSMEAAQHIIQFGNGLPIAMTN------LAGDAAGRGGWQPATEANLYVGDLDPAVSDYELLNYFRARFASVRHAKVMCDEVGQSRGYGFIRFSSMADAQEAVKLFNGTMIRGRPIRVNLAHRSSGGQSNDSRGGGGGNVNGGTH-------PNGPKRRRDQGSVPSGVTDESITTLFVGGTIPSIQEGTLWEEFSAHGTVQAVKLPISKTGFAFVRFATRADAESAKNALNMSSVPSINPHRAIRVEWAAEQLP 298          
BLAST of Gvermi12404.t1 vs. uniprot
Match: S8AX60_PENO1 (Uncharacterized protein n=27 Tax=Aspergillaceae TaxID=1131492 RepID=S8AX60_PENO1)

HSP 1 Score: 182 bits (462), Expect = 9.040e-49
Identity = 112/334 (33.53%), Postives = 179/334 (53.59%), Query Frame = 0
Query:   20 ANGTISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGTA----GTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEY-GQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWA----------SERIPATKPPPPLVSSDMP 338
            A+G  ++W G+L+ ++DENF+R      G   +   +K++RD +SG +AGY F+D ASP AA + ++  +G P+P TNR ++LN      +   +    G E +I+VG+L P V +Y L++ F+ R+ S + AK++ +   G SRGYGFVRF++ +D +RA+TEMQG    ++P+R+S AT +++GP                              P+ +    DP NTT+F+GG + ++T++ L   F  FGE+  V++P  K G  FV+F  R +A  A   + G    P+   + +R+ W           S   PA  PPP   S  MP
Sbjct:   56 ADGKTTLWMGELEPWIDENFIRNLWFQMG---EQVNVKMIRDKFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPKNKGPGVGAANMGGMPGPAGMYPPMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK-GCGFVQFVQRHAAEMAINQMQG---YPIGNSR-VRLSWGRSQNNSGPAGSPYRPAPPPPPMYPSMGMP 380          
BLAST of Gvermi12404.t1 vs. uniprot
Match: B6HKW0_PENRW (Pc21g11890 protein n=7 Tax=Penicillium TaxID=5073 RepID=B6HKW0_PENRW)

HSP 1 Score: 181 bits (458), Expect = 3.660e-48
Identity = 115/343 (33.53%), Postives = 183/343 (53.35%), Query Frame = 0
Query:   14 PANSRPANGTISIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGM-HAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGTA----GTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEY-GQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTN--KRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWA----------SERIPATKPPPPLVSSDMP 338
            P   + A+G  ++W G+L+ ++DENF+R      G   +   +K++RD +SG  +AGY F+D ASP AA + ++  +G P+P TNR ++LN      +   +    G E +I+VG+L P V +Y L++ F+ R+ S + AK++ +   G SRGYGFVRF++ +D +RA+TEMQG    ++P+R+S AT +++GP                        PP      P+ +    DP NTT+F+GG + ++T++ L   F  FGE+  V++P  K G  FV+F  R +A  A   + G    P+   + +R+ W           S   PA  PPP   S  MP
Sbjct:   50 PVPQQGADGKTTLWMGELEPWIDENFIRNLWFQMG---EQVNVKMIRDKFSGRSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK-GCGFVQFVQRHAAEMAINQMQG---YPIGNSR-VRLSWGRSQNNSGPAGSPYRPAPPPPPMYPSMGMP 383          
BLAST of Gvermi12404.t1 vs. uniprot
Match: A0A6I9RBN6_ELAGV (polyadenylate-binding protein RBP45 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RBN6_ELAGV)

HSP 1 Score: 181 bits (458), Expect = 6.010e-48
Identity = 118/333 (35.44%), Postives = 172/333 (51.65%), Query Frame = 0
Query:    2 PPATAPMSSSPPPANSRPANGTI--SIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVN--GTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEY-GQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERIPATKPP 329
            PP    M    P   S+PA+     ++W GDL  +MDEN+L      SG   ++  +K++R+  +G   GYGF++ A+  +A+RV+   +G  +P   + +RLN   + +    G  G +  I+VG+L   VTDY L   F+ RY SV+ AKVV +   G+S+GYGFVRF + ++  RA+TEM G   +S+P+R+  A  +  G                         P T          +DP NTTIF+GG  P++TD+LL + FS +GEL  V++PV K    FV+FK R  A  A   L+GT     N    IR+ W   R PA K P
Sbjct:   71 PPQQPQMQYPAPTVASQPASADEIRTLWIGDLQYWMDENYLYGCFVQSG---EVLSVKIIRNKQTGQSEGYGFIEFATRASAERVLQTYNGQMMPNVEQTFRLNWATSGSGERRGDEGADYTIFVGDLASDVTDYLLQETFKNRYSSVKGAKVVSDRITGRSKGYGFVRFGDLNEQTRAMTEMNGVYCSSRPMRIGPAANKKAGAQQYSTNASYPT------------TPGTESE-------NDPNNTTIFVGGLDPNVTDDLLRQVFSPYGELVYVKIPVGKR-CGFVQFKIRSCAEEALRMLNGTQLGGQN----IRLSWG--RSPANKQP 374          
BLAST of Gvermi12404.t1 vs. uniprot
Match: A0A3S3NAV1_9MAGN (Polyadenylate-binding protein RBP47B n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3NAV1_9MAGN)

HSP 1 Score: 179 bits (453), Expect = 3.580e-47
Identity = 111/306 (36.27%), Postives = 169/306 (55.23%), Query Frame = 0
Query:   25 SIWAGDLDAYMDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGT--AGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCN-EYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXXXXXXAPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESLSGTHFQPLNAHKPIRVEWASERIPATK 327
            ++W GDL  ++DE +L+   + +G   ++  IK++R+  +G   GYGF++  S  AA+R++   +G  +PGT + +RLN            AG E +I+VG+L P VTDY L   FR +Y SVR AKVV +   G+S+GYGFV+F++  +  RA+TEM G   +++P+R+S AT     P                        PP    P      +D TNTTIF+GG  P++T++ L + F+ FGEL  V++P++K G  FV+F  R SA  A + L GT    +   +P+R+ W   R PA K
Sbjct:   31 TLWIGDLQYWVDETYLQSCFSHTG---EVLSIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAAT-----PKKTTTSHQQYPAVKAIYPAPTYITPPVQALP----VDNDITNTTIFVGGLDPNVTEDELRQIFAQFGELVYVKIPLSK-GCGFVQFGARSSAEEAIQRLQGT----MIGQQPVRLSWG--RSPANK 317          
The following BLAST results are available for this feature:
BLAST of Gvermi12404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK64_9FLOR3.110e-28981.39Polyadenylate-binding protein RBP45A n=1 Tax=Graci... [more]
R7QS10_CHOCR1.660e-18461.69Putative mRNA binding post-transcriptional regulat... [more]
A0A7S1TAX1_9RHOD8.600e-10146.41Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0G195_9RHOD1.870e-9450.81Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YRZ5_PORPP2.230e-7543.44Polyadenylate-binding protein RBP47C n=1 Tax=Porph... [more]
A0A5J4YS19_PORPP3.980e-7445.34Polyadenylate-binding protein RBP47C n=1 Tax=Porph... [more]
S8AX60_PENO19.040e-4933.53Uncharacterized protein n=27 Tax=Aspergillaceae Ta... [more]
B6HKW0_PENRW3.660e-4833.53Pc21g11890 protein n=7 Tax=Penicillium TaxID=5073 ... [more]
A0A6I9RBN6_ELAGV6.010e-4835.44polyadenylate-binding protein RBP45 n=3 Tax=Arecac... [more]
A0A3S3NAV1_9MAGN3.580e-4736.27Polyadenylate-binding protein RBP47B n=1 Tax=Cinna... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 25..103
e-value: 0.0019
score: 27.5
coord: 119..192
e-value: 2.5E-22
score: 90.2
coord: 245..317
e-value: 3.8E-14
score: 63.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 246..305
e-value: 5.5E-12
score: 45.4
coord: 120..190
e-value: 5.2E-19
score: 67.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 244..321
score: 16.039637
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 24..107
score: 9.115145
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 118..196
score: 18.512669
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 24..105
e-value: 3.0E-11
score: 45.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 106..212
e-value: 7.2E-24
score: 86.3
coord: 213..327
e-value: 2.0E-20
score: 75.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..444
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 24..344
NoneNo IPR availablePANTHERPTHR47640:SF10TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATEDcoord: 24..344
NoneNo IPR availableCDDcd00590RRM_SFcoord: 246..317
e-value: 6.47443E-15
score: 67.7153
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 214..328
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 118..221
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 7..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4572925..4574439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12404.t1Gvermi12404.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4572925..4574439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12404.t1 ID=Gvermi12404.t1|Name=Gvermi12404.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=505bp
MPPATAPMSSSPPPANSRPANGTISIWAGDLDAYMDENFLRQAVTASGWG
PDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCW
RLNMGRNAAVNGTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKV
VCNEYGQSRGYGFVRFANAHDAERAVTEMQGFEFNSKPIRLSHATGRSRG
PNSRGPGHHGYNNHHHASHGGAGHAPPTNKRPRQLMAPDDPTNTTIFIGG
TAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTRESAVRAKESL
SGTHFQPLNAHKPIRVEWASERIPATKPPPPLVSSDMPVMNYEPNSQPFD
PQFSSSYASNTTGANNSIQEGFNNFHSMPNGSSPSSGANPSVVGLSQPQP
GSVEDNKVSVAGASAVTAMQTAAPVVKNETSPVENGNSNGSGEAEPPSKR
AAVGRSEYAAVAAENTPKKDNVLDVKADAPSGDSPAMQFSWLNSSSTQPT
SSPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf