Gvermi12338.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12338.t1
Unique NameGvermi12338.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length204
Homology
BLAST of Gvermi12338.t1 vs. uniprot
Match: A0A2V3J4A7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4A7_9FLOR)

HSP 1 Score: 213 bits (541), Expect = 9.040e-67
Identity = 103/153 (67.32%), Postives = 135/153 (88.24%), Query Frame = 0
Query:    1 MVVVLANERVRVVLREAQAEGSVRRTENVETVSHKCLANAIRKCANGPSLTSLLAASQVYLTHEHACEVHIPRVRNPELQARIERLEALQKDREYARMVRDVSRADATNVEIESARMGKFAPQMSIGVNVVVTMATCFTAGFFVFKHSTGSQT 153
            MVV L NER+R VL+ AQ++ +V+RT++VETV+H+ L NAIR   N PSL+SLL+++++YL+H+HAC+  IP VRNP+LQAR+ERL+A  KD EYAR++RDV+RADA+NVEIE+ARM KFAPQMS+GVNV+VTMATCFTAG+F+FKHSTG+QT
Sbjct:    1 MVVALVNERIRKVLQVAQSDHAVKRTKDVETVTHRALVNAIRGQRNAPSLSSLLSSTELYLSHDHACKERIPHVRNPQLQARVERLQARMKDAEYARIIRDVARADASNVEIEAARMSKFAPQMSLGVNVIVTMATCFTAGYFLFKHSTGTQT 153          
BLAST of Gvermi12338.t1 vs. uniprot
Match: A0A8J5XC23_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XC23_DIALT)

HSP 1 Score: 67.4 bits (163), Expect = 3.520e-10
Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 0
Query:   73 RVRNPELQARIERLEALQKDREYARMVRDVSRADATNVEIESARMGKFAPQMSIGVNVVVTMATCFTAGFFVFKHSTGS 151
            R R+P L  R+E+L+A +++ EYARMVRD++   A   ++ S  +  F   M +GVN++V++AT FTAG+FV K+S G+
Sbjct:   87 RERDPALVKRLEKLDAARQNEEYARMVRDITNHGAAKEKL-STEIASFKASMGVGVNLLVSVATMFTAGWFVTKNSIGA 164          
BLAST of Gvermi12338.t1 vs. uniprot
Match: A0A7S0PZQ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZQ7_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 3.700e-6
Identity = 28/72 (38.89%), Postives = 47/72 (65.28%), Query Frame = 0
Query:   73 RVRNPELQARIERLEALQKDREYARMVRDVSRADATNVEIESARMGKFAPQMSIGVNVVVTMATCFTAGFFV 144
            R R+P L  R+E++ A+Q++REYA MV  +S  ++T  +   A M  +  QM +G+N++V+M T F  G+F+
Sbjct:   85 RKRDPALVKRLEKIRAVQENREYAAMVGQLSSGESTGRD--EAEMSTYRSQMGVGLNLLVSMGTMFCVGYFI 154          
The following BLAST results are available for this feature:
BLAST of Gvermi12338.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J4A7_9FLOR9.040e-6767.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A8J5XC23_DIALT3.520e-1044.30Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S0PZQ7_9EUKA3.700e-638.89Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021013ATPase, vacuolar ER assembly factor, Vma12PFAMPF11712Vma12coord: 52..176
e-value: 5.2E-12
score: 46.0
IPR021013ATPase, vacuolar ER assembly factor, Vma12PANTHERPTHR31394TRANSMEMBRANE PROTEIN 199coord: 26..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availableTMHMMTMhelixcoord: 125..144
NoneNo IPR availableTMHMMTMhelixcoord: 159..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4270335..4270946 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12338.t1Gvermi12338.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4270335..4270946 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12338.t1 ID=Gvermi12338.t1|Name=Gvermi12338.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=204bp
MVVVLANERVRVVLREAQAEGSVRRTENVETVSHKCLANAIRKCANGPSL
TSLLAASQVYLTHEHACEVHIPRVRNPELQARIERLEALQKDREYARMVR
DVSRADATNVEIESARMGKFAPQMSIGVNVVVTMATCFTAGFFVFKHSTG
SQTGGLIGGVAAMIIAMGVEVVLVLTRIYTIDKEVDRHVKRRQKKADPAR
TLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021013ATPase_Vma12