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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 55529.EKX46220 |
| Preferred name | bre-3 |
| PFAMs | Acyl_transf_3,Glyco_trans_2_3 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K02359 |
| KEGG Pathway | ko04320,map04320 |
| GOs | GO:0000003,GO:0000030,GO:0000226,GO:0000902,GO:0000904,GO:0001667,GO:0001744,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006403,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006687,GO:0006688,GO:0006807,GO:0006810,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007155,GO:0007163,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007297,GO:0007298,GO:0007299,GO:0007308,GO:0007399,GO:0007409,GO:0007411,GO:0007422,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0007621,GO:0008049,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009605,GO:0009636,GO:0009653,GO:0009888,GO:0009987,GO:0009994,GO:0010631,GO:0015931,GO:0016020,GO:0016021,GO:0016043,GO:0016325,GO:0016333,GO:0016334,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019098,GO:0019187,GO:0019953,GO:0021700,GO:0022008,GO:0022412,GO:0022414,GO:0022610,GO:0030030,GO:0030148,GO:0030154,GO:0030182,GO:0030707,GO:0030720,GO:0030855,GO:0030951,GO:0030952,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033036,GO:0033227,GO:0040011,GO:0042221,GO:0042248,GO:0042330,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044464,GO:0044703,GO:0045165,GO:0045434,GO:0045924,GO:0046008,GO:0046467,GO:0046662,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048934,GO:0048935,GO:0050657,GO:0050658,GO:0050789,GO:0050795,GO:0050896,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051674,GO:0051704,GO:0060179,GO:0060180,GO:0060429,GO:0060788,GO:0061564,GO:0065007,GO:0065008,GO:0070085,GO:0071696,GO:0071697,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0090130,GO:0090132,GO:0090136,GO:0097485,GO:0097502,GO:0098609,GO:0120036,GO:0120039,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509,GO:2000241 |
| Evalue | 7.14e-81 |
| EggNOG OGs | 2CN2A@1|root,2QTGI@2759|Eukaryota |
| Description | beta-1,4-mannosyltransferase activity |
| COG category | S |
| CAZy | GT2 |
| BRITE | ko00000,ko00001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi11530.t1 ID=Gvermi11530.t1|Name=Gvermi11530.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=711bp LHFSRLPLIRAVNRIAYAAFLLAFPIYRAISRSLCAPSHHAFSFVCFEAH EPPRLPGEHGLFSPLDAGQVARTTVENAVVRAFSTSLIFEEGVNVFVYLF LLLAASYLACHFVFVPLAALADAACRRVAFLADQQLLPPLLALLHGYGVH ETPRRHASKLERSCRLILYYFFSISFLCFVYHFSQPLTYQLVSPPRSFLC WLPNALYHCEAMGNDDAGVVHFLLTNRYVQSFVALCRLVSLLTLPAMSSN LIGHFFFPKANWKALPTISQMLDAHVPETPVADEAAQSCHPHETPAKHGS SSALKEPVNLDFKLFIRYVTRGTNPRTVATNTRRALHVLYESGLPRHMWC VEVVTDKGMRLVEQVSDMSVAEIIVPDSYRPPRGAKYKARALNYAIGASA ATARDWIVHLDEETLFDADTVRAVVHHCGVESYKTRVARTQQWPRIGQGP IVYGRAMTDYATRAGNWVTTLADSNRVSDDCGRYRLQFECGEVWVGMHGS FVVAANCVEQEITFDHGVDGSIAEDAFFAMLARSAKVQFRWIDALMFEQS PFTIQDFIKQRSRWLVGGMRVVNSGKIPLRLRFVMGTLTTLWSMMPVTYV ALIVAVALGNNTDDSWWKRTYYYTLLPFLAAVSLWSYVLGFMVTFSVWAV GLVNFIVLLYAQVLLTPVFGFVEMCAVVYGLLNYKRISTAFHVVQKDGEA AVGERQGLLG* back to topspliced messenger RNA >Gvermi11530.t1 ID=Gvermi11530.t1|Name=Gvermi11530.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2133bp|location=Sequence derived from alignment at ScGOVlb_3404:743129..745261+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
CTGCACTTCTCGCGTCTGCCACTCATTCGCGCCGTCAATCGCATCGCGTA CGCCGCCTTTCTTCTGGCATTCCCGATTTACCGTGCAATCTCGCGTTCGC TGTGTGCTCCTTCGCATCATGCTTTTTCGTTTGTATGTTTCGAGGCGCAC GAGCCCCCGCGACTGCCCGGCGAGCACGGCTTGTTCTCGCCCCTCGACGC GGGCCAAGTCGCCCGCACCACCGTGGAGAATGCCGTTGTGCGCGCCTTTT CTACCTCTCTTATCTTCGAAGAGGGCGTCAACGTCTTTGTCTATCTCTTT CTCTTGCTCGCCGCCTCGTACCTCGCCTGCCATTTCGTCTTTGTTCCCCT GGCTGCCCTGGCGGATGCCGCCTGCAGAAGGGTCGCTTTTCTCGCCGACC AGCAGCTGCTGCCTCCCTTGTTAGCGCTGCTGCACGGCTACGGTGTGCAC GAAACGCCGCGTCGTCATGCGTCAAAGCTGGAGCGCTCCTGTCGCTTGAT CCTGTATTACTTCTTTTCCATTTCCTTCCTGTGTTTTGTGTATCACTTCT CGCAACCTCTCACGTATCAGTTGGTGAGCCCGCCGCGATCGTTTTTGTGC TGGCTTCCCAACGCCCTGTACCACTGTGAGGCCATGGGCAACGACGACGC CGGGGTCGTGCATTTTTTGTTGACCAATCGATATGTACAGTCTTTCGTCG CCTTGTGTCGGTTGGTATCGCTGCTAACGTTGCCAGCGATGTCGTCCAAT CTCATTGGGCACTTTTTCTTCCCCAAGGCAAACTGGAAAGCGCTGCCAAC CATTTCGCAAATGTTGGACGCCCACGTGCCTGAAACCCCCGTCGCCGATG AGGCTGCGCAGAGCTGTCATCCACATGAAACGCCTGCCAAGCACGGCAGC AGCAGCGCACTCAAGGAACCGGTGAATCTCGACTTCAAGCTCTTTATTCG CTATGTCACCCGCGGGACCAACCCGCGCACAGTGGCCACCAACACCCGCC GCGCATTGCACGTGCTGTACGAAAGCGGGCTGCCGCGACACATGTGGTGC GTCGAGGTTGTCACGGACAAGGGCATGCGGCTGGTGGAGCAAGTGAGCGA CATGTCCGTCGCCGAAATCATTGTTCCCGACAGTTATCGCCCCCCCCGCG GCGCCAAGTACAAGGCCAGGGCGCTCAACTACGCCATTGGCGCCTCCGCT GCCACGGCGCGCGACTGGATTGTGCACCTGGACGAAGAAACTCTCTTCGA CGCTGACACCGTGCGCGCCGTCGTCCACCATTGCGGCGTGGAAAGCTACA AAACTCGCGTGGCGCGCACGCAGCAGTGGCCTCGCATCGGTCAGGGTCCC ATTGTGTACGGGCGCGCAATGACAGATTACGCCACCAGGGCCGGGAACTG GGTGACTACCTTGGCCGATTCCAATCGTGTTTCTGACGACTGCGGAAGGT ATAGACTGCAGTTTGAGTGCGGTGAGGTGTGGGTCGGCATGCACGGCTCG TTTGTCGTGGCGGCCAACTGCGTGGAACAGGAGATCACATTTGATCACGG CGTCGACGGAAGCATCGCTGAAGATGCTTTCTTCGCCATGCTTGCCCGAT CGGCAAAAGTGCAATTCCGGTGGATTGATGCTCTGATGTTCGAGCAGAGC CCTTTCACGATACAGGACTTCATCAAGCAGCGGTCGAGATGGCTTGTGGG AGGCATGCGCGTAGTGAACAGTGGCAAAATTCCTCTGCGTCTGCGCTTTG TTATGGGGACGCTGACCACGCTGTGGTCCATGATGCCCGTCACTTACGTT GCGCTGATTGTGGCTGTGGCGCTGGGCAATAATACGGATGATTCGTGGTG GAAACGAACGTACTACTACACCCTGCTTCCTTTCTTGGCGGCTGTATCAC TATGGAGCTATGTGCTGGGATTCATGGTGACCTTTTCCGTATGGGCCGTG GGGCTGGTCAACTTCATTGTTCTTCTCTACGCCCAGGTGCTGCTGACACC TGTATTCGGGTTTGTGGAGATGTGTGCTGTGGTGTATGGGCTGCTTAATT ACAAAAGGATCTCCACGGCTTTCCATGTTGTACAGAAAGACGGGGAGGCA GCAGTCGGCGAACGGCAGGGCTTGTTGGGGTGA back to topprotein sequence of Gvermi11530.t1 >Gvermi11530.t1 ID=Gvermi11530.t1|Name=Gvermi11530.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=711bp
LHFSRLPLIRAVNRIAYAAFLLAFPIYRAISRSLCAPSHHAFSFVCFEAH EPPRLPGEHGLFSPLDAGQVARTTVENAVVRAFSTSLIFEEGVNVFVYLF LLLAASYLACHFVFVPLAALADAACRRVAFLADQQLLPPLLALLHGYGVH ETPRRHASKLERSCRLILYYFFSISFLCFVYHFSQPLTYQLVSPPRSFLC WLPNALYHCEAMGNDDAGVVHFLLTNRYVQSFVALCRLVSLLTLPAMSSN LIGHFFFPKANWKALPTISQMLDAHVPETPVADEAAQSCHPHETPAKHGS SSALKEPVNLDFKLFIRYVTRGTNPRTVATNTRRALHVLYESGLPRHMWC VEVVTDKGMRLVEQVSDMSVAEIIVPDSYRPPRGAKYKARALNYAIGASA ATARDWIVHLDEETLFDADTVRAVVHHCGVESYKTRVARTQQWPRIGQGP IVYGRAMTDYATRAGNWVTTLADSNRVSDDCGRYRLQFECGEVWVGMHGS FVVAANCVEQEITFDHGVDGSIAEDAFFAMLARSAKVQFRWIDALMFEQS PFTIQDFIKQRSRWLVGGMRVVNSGKIPLRLRFVMGTLTTLWSMMPVTYV ALIVAVALGNNTDDSWWKRTYYYTLLPFLAAVSLWSYVLGFMVTFSVWAV GLVNFIVLLYAQVLLTPVFGFVEMCAVVYGLLNYKRISTAFHVVQKDGEA AVGERQGLLG* back to topmRNA from alignment at ScGOVlb_3404:743129..745261+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi11530.t1 ID=Gvermi11530.t1|Name=Gvermi11530.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2133bp|location=Sequence derived from alignment at ScGOVlb_3404:743129..745261+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) CTGCACTTCTCGCGTCTGCCACTCATTCGCGCCGTCAATCGCATCGCGTA
CGCCGCCTTTCTTCTGGCATTCCCGATTTACCGTGCAATCTCGCGTTCGC
TGTGTGCTCCTTCGCATCATGCTTTTTCGTTTGTATGTTTCGAGGCGCAC
GAGCCCCCGCGACTGCCCGGCGAGCACGGCTTGTTCTCGCCCCTCGACGC
GGGCCAAGTCGCCCGCACCACCGTGGAGAATGCCGTTGTGCGCGCCTTTT
CTACCTCTCTTATCTTCGAAGAGGGCGTCAACGTCTTTGTCTATCTCTTT
CTCTTGCTCGCCGCCTCGTACCTCGCCTGCCATTTCGTCTTTGTTCCCCT
GGCTGCCCTGGCGGATGCCGCCTGCAGAAGGGTCGCTTTTCTCGCCGACC
AGCAGCTGCTGCCTCCCTTGTTAGCGCTGCTGCACGGCTACGGTGTGCAC
GAAACGCCGCGTCGTCATGCGTCAAAGCTGGAGCGCTCCTGTCGCTTGAT
CCTGTATTACTTCTTTTCCATTTCCTTCCTGTGTTTTGTGTATCACTTCT
CGCAACCTCTCACGTATCAGTTGGTGAGCCCGCCGCGATCGTTTTTGTGC
TGGCTTCCCAACGCCCTGTACCACTGTGAGGCCATGGGCAACGACGACGC
CGGGGTCGTGCATTTTTTGTTGACCAATCGATATGTACAGTCTTTCGTCG
CCTTGTGTCGGTTGGTATCGCTGCTAACGTTGCCAGCGATGTCGTCCAAT
CTCATTGGGCACTTTTTCTTCCCCAAGGCAAACTGGAAAGCGCTGCCAAC
CATTTCGCAAATGTTGGACGCCCACGTGCCTGAAACCCCCGTCGCCGATG
AGGCTGCGCAGAGCTGTCATCCACATGAAACGCCTGCCAAGCACGGCAGC
AGCAGCGCACTCAAGGAACCGGTGAATCTCGACTTCAAGCTCTTTATTCG
CTATGTCACCCGCGGGACCAACCCGCGCACAGTGGCCACCAACACCCGCC
GCGCATTGCACGTGCTGTACGAAAGCGGGCTGCCGCGACACATGTGGTGC
GTCGAGGTTGTCACGGACAAGGGCATGCGGCTGGTGGAGCAAGTGAGCGA
CATGTCCGTCGCCGAAATCATTGTTCCCGACAGTTATCGCCCCCCCCGCG
GCGCCAAGTACAAGGCCAGGGCGCTCAACTACGCCATTGGCGCCTCCGCT
GCCACGGCGCGCGACTGGATTGTGCACCTGGACGAAGAAACTCTCTTCGA
CGCTGACACCGTGCGCGCCGTCGTCCACCATTGCGGCGTGGAAAGCTACA
AAACTCGCGTGGCGCGCACGCAGCAGTGGCCTCGCATCGGTCAGGGTCCC
ATTGTGTACGGGCGCGCAATGACAGATTACGCCACCAGGGCCGGGAACTG
GGTGACTACCTTGGCCGATTCCAATCGTGTTTCTGACGACTGCGGAAGGT
ATAGACTGCAGTTTGAGTGCGGTGAGGTGTGGGTCGGCATGCACGGCTCG
TTTGTCGTGGCGGCCAACTGCGTGGAACAGGAGATCACATTTGATCACGG
CGTCGACGGAAGCATCGCTGAAGATGCTTTCTTCGCCATGCTTGCCCGAT
CGGCAAAAGTGCAATTCCGGTGGATTGATGCTCTGATGTTCGAGCAGAGC
CCTTTCACGATACAGGACTTCATCAAGCAGCGGTCGAGATGGCTTGTGGG
AGGCATGCGCGTAGTGAACAGTGGCAAAATTCCTCTGCGTCTGCGCTTTG
TTATGGGGACGCTGACCACGCTGTGGTCCATGATGCCCGTCACTTACGTT
GCGCTGATTGTGGCTGTGGCGCTGGGCAATAATACGGATGATTCGTGGTG
GAAACGAACGTACTACTACACCCTGCTTCCTTTCTTGGCGGCTGTATCAC
TATGGAGCTATGTGCTGGGATTCATGGTGACCTTTTCCGTATGGGCCGTG
GGGCTGGTCAACTTCATTGTTCTTCTCTACGCCCAGGTGCTGCTGACACC
TGTATTCGGGTTTGTGGAGATGTGTGCTGTGGTGTATGGGCTGCTTAATT
ACAAAAGGATCTCCACGGCTTTCCATGTTGTACAGAAAGACGGGGAGGCA
GCAGTCGGCGAACGGCAGGGCTTGTTGGGGTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:743129..745261+ >Gvermi11530.t1 ID=Gvermi11530.t1|Name=Gvermi11530.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2133bp|location=Sequence derived from alignment at ScGOVlb_3404:743129..745261+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) CTGCACTTCTCGCGTCTGCCACTCATTCGCGCCGTCAATCGCATCGCGTA CGCCGCCTTTCTTCTGGCATTCCCGATTTACCGTGCAATCTCGCGTTCGC TGTGTGCTCCTTCGCATCATGCTTTTTCGTTTGTATGTTTCGAGGCGCAC GAGCCCCCGCGACTGCCCGGCGAGCACGGCTTGTTCTCGCCCCTCGACGC GGGCCAAGTCGCCCGCACCACCGTGGAGAATGCCGTTGTGCGCGCCTTTT CTACCTCTCTTATCTTCGAAGAGGGCGTCAACGTCTTTGTCTATCTCTTT CTCTTGCTCGCCGCCTCGTACCTCGCCTGCCATTTCGTCTTTGTTCCCCT GGCTGCCCTGGCGGATGCCGCCTGCAGAAGGGTCGCTTTTCTCGCCGACC AGCAGCTGCTGCCTCCCTTGTTAGCGCTGCTGCACGGCTACGGTGTGCAC GAAACGCCGCGTCGTCATGCGTCAAAGCTGGAGCGCTCCTGTCGCTTGAT CCTGTATTACTTCTTTTCCATTTCCTTCCTGTGTTTTGTGTATCACTTCT CGCAACCTCTCACGTATCAGTTGGTGAGCCCGCCGCGATCGTTTTTGTGC TGGCTTCCCAACGCCCTGTACCACTGTGAGGCCATGGGCAACGACGACGC CGGGGTCGTGCATTTTTTGTTGACCAATCGATATGTACAGTCTTTCGTCG CCTTGTGTCGGTTGGTATCGCTGCTAACGTTGCCAGCGATGTCGTCCAAT CTCATTGGGCACTTTTTCTTCCCCAAGGCAAACTGGAAAGCGCTGCCAAC CATTTCGCAAATGTTGGACGCCCACGTGCCTGAAACCCCCGTCGCCGATG AGGCTGCGCAGAGCTGTCATCCACATGAAACGCCTGCCAAGCACGGCAGC AGCAGCGCACTCAAGGAACCGGTGAATCTCGACTTCAAGCTCTTTATTCG CTATGTCACCCGCGGGACCAACCCGCGCACAGTGGCCACCAACACCCGCC GCGCATTGCACGTGCTGTACGAAAGCGGGCTGCCGCGACACATGTGGTGC GTCGAGGTTGTCACGGACAAGGGCATGCGGCTGGTGGAGCAAGTGAGCGA CATGTCCGTCGCCGAAATCATTGTTCCCGACAGTTATCGCCCCCCCCGCG GCGCCAAGTACAAGGCCAGGGCGCTCAACTACGCCATTGGCGCCTCCGCT GCCACGGCGCGCGACTGGATTGTGCACCTGGACGAAGAAACTCTCTTCGA CGCTGACACCGTGCGCGCCGTCGTCCACCATTGCGGCGTGGAAAGCTACA AAACTCGCGTGGCGCGCACGCAGCAGTGGCCTCGCATCGGTCAGGGTCCC ATTGTGTACGGGCGCGCAATGACAGATTACGCCACCAGGGCCGGGAACTG GGTGACTACCTTGGCCGATTCCAATCGTGTTTCTGACGACTGCGGAAGGT ATAGACTGCAGTTTGAGTGCGGTGAGGTGTGGGTCGGCATGCACGGCTCG TTTGTCGTGGCGGCCAACTGCGTGGAACAGGAGATCACATTTGATCACGG CGTCGACGGAAGCATCGCTGAAGATGCTTTCTTCGCCATGCTTGCCCGAT CGGCAAAAGTGCAATTCCGGTGGATTGATGCTCTGATGTTCGAGCAGAGC CCTTTCACGATACAGGACTTCATCAAGCAGCGGTCGAGATGGCTTGTGGG AGGCATGCGCGTAGTGAACAGTGGCAAAATTCCTCTGCGTCTGCGCTTTG TTATGGGGACGCTGACCACGCTGTGGTCCATGATGCCCGTCACTTACGTT GCGCTGATTGTGGCTGTGGCGCTGGGCAATAATACGGATGATTCGTGGTG GAAACGAACGTACTACTACACCCTGCTTCCTTTCTTGGCGGCTGTATCAC TATGGAGCTATGTGCTGGGATTCATGGTGACCTTTTCCGTATGGGCCGTG GGGCTGGTCAACTTCATTGTTCTTCTCTACGCCCAGGTGCTGCTGACACC TGTATTCGGGTTTGTGGAGATGTGTGCTGTGGTGTATGGGCTGCTTAATT ACAAAAGGATCTCCACGGCTTTCCATGTTGTACAGAAAGACGGGGAGGCA GCAGTCGGCGAACGGCAGGGCTTGTTGGGGTGA back to top
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