Gvermi12262.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12262.t1
Unique NameGvermi12262.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length379
Homology
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BLAST of Gvermi12262.t1 vs. uniprot
Match: A0A2V3IIP2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIP2_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 7.460e-10
Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 0 
Query:   15 EDLLGDAAVLGGSGGALAQYPTVTEPTDAFVPDILAPSVDPITIAAPPPAESYGAPSVDPPAMDDVKPGAAPQVLTPLPTASSAGTNIPPAVSPSYQALAQALEVPAVAALESVRDEMIAHGH---YNFQEVMIAGTNTRGRVSALYERLNKRVDTV--TLPDGLQKDLVSVAKRILE 187
            EDL G   V     G     P VTEP   FVP ++AP+VDP TI APPPA    AP          +P AA   LT +   ++AG ++ P + PS Q +A  L V   AALES+  EMIA+G+   +   ++++   +   R S   E L      +   L + LQ+++ S+++ + E
Sbjct:  228 EDLFGGEPVDPIPSGVPHSAPVVTEP---FVPAVVAPTVDPPTIVAPPPAVVLAAPEAV------AEPVAATPALTIVLEVTTAGVSVAPLLEPSRQVIAGMLGVATYAALESLSAEMIANGYTGNWRLGDILMTARSWLRR-SVRLEALQAETQELRSNLANVLQENMASLSQGLTE 395
[Close]
BLAST of Gvermi12262.t1 vs. uniprot
Match: A0A2V3J2I3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2I3_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 7.770e-9
Identity = 59/175 (33.71%), Postives = 83/175 (47.43%), Query Frame = 0 
Query:   15 EDLLGDAAVLGGSGGALAQYPTVTEPTDAFVPDILAPSVDPITIAAPPPAESYGAPSVDPPAMDDVKPGAAPQVLTPLPTASSAGTNIPPAVSPSYQALAQALEVPAVAALESVRDEMIAHGHYNFQEVMIAGTNTRGRVSALYERLNKRVDTV--TLPDGLQKDLVSVAKRILE 187
            EDL+G   V     G     P VTEP   FVP ++AP+VDP  IAAPPP     AP          +P  A   LT +P  ++AG ++ P   PS QA+A  L V   A LES+   MIA+G+     +    + +  R     E L      +   L   LQ+++ S+ +R+ E
Sbjct:  250 EDLVGGEPVDPIPNGVPHSAPVVTEP---FVPAVVAPTVDPPAIAAPPPVVELAAPEAV------AEPVTAAPALTIVPEVTTAGVSVAPLREPSRQAIAGMLGVATYATLESLSAVMIANGYRGNWRLGDMTSRSWLRRLVRLEALQAETQELRSNLASVLQENMASLYQRVTE 415
The following BLAST results are available for this feature:
BLAST of Gvermi12262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIP2_9FLOR7.460e-1034.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2I3_9FLOR7.770e-933.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4022102..4024113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12262.t1Gvermi12262.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4022102..4024113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12262.t1 ID=Gvermi12262.t1|Name=Gvermi12262.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=379bp
MRVHLVLDFRSPPEEDLLGDAAVLGGSGGALAQYPTVTEPTDAFVPDILA
PSVDPITIAAPPPAESYGAPSVDPPAMDDVKPGAAPQVLTPLPTASSAGT
NIPPAVSPSYQALAQALEVPAVAALESVRDEMIAHGHYNFQEVMIAGTNT
RGRVSALYERLNKRVDTVTLPDGLQKDLVSVAKRILEMYPIDGTSSSSSA
TPDPEEVEELMKSLLPSPVDILTDSFFRAPLFALVTLLKVARLYGCVTPQ
DPLHYHLELSDVDRDNKNIAAHVWFANFLGYDSETIHASAAHYKDFRGAP
DPSRRPPTVPPKTGVRVELDHVPETTPEVDKVAVKRPNPGLESINRENEV
VRPHQRTGNIPTSSQSSSDVEESDANDS*
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