Gvermi12220.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12220.t1
Unique NameGvermi12220.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length870
Homology
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BLAST of Gvermi12220.t1 vs. uniprot
Match: A0A2V3J0A7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0A7_9FLOR)

HSP 1 Score: 341 bits (874), Expect = 2.990e-99
Identity = 237/511 (46.38%), Postives = 305/511 (59.69%), Query Frame = 0 
Query:  327 DDVPFGGVPRDKRQKEDPALKKQAAQLYTDDIHSTIPLKKSKFAVP------EG-------------------------INLQTAKAITRKATDEKIPKNTKANKKRGKLKENKRRFTSYSLIVHSGDE-----SDGNMVNNSSSQPRKRKQPVLISHSDDEDFVNSESPSKKPDSSGREKTDDNEEDMSGTAKPRTSRKKVQTRMEGTRKSPRLGKQRKE-SVLEPAANIPKRPRVIQKNERKRKTTKSLDELSDSNQAQH--GASDSDDDF-VPTSDRGKLFAEQKAQWLKAQQTKEKHSVTPKKVAKRKAKKQEATGKRDVQKVCNSDGEKTDSRVDEQFSDSDSQNPSQRGSQPLEVKITSLSTKRRRRKTDFEEERKRLTESELTTIRLAFVSHYPPPPSNAQAQGRFEMRYGREMSQAMIQGLWEKELKHWSERWWKFYTGFNDLAREKKLAKPVDKNPTITKKEAEAWAQTFYEKHGDARISPVA---QKPQESEPPSSDPLES 794
            +D+P GGV    +++E+ +L++++A L++ D+ STIPLKKSK + P      EG                         + L+  K  +R A + + P         GK    +RR    SLI HSGDE     SD       SS  +KR    ++   +D       S   + DS   +   D+++ ++   +   ++ K +   EG+RKSPRL K+ ++ S   P      R R   +N R  +TTKSLDEL D+  A      +DS +DF +  SDR K F  ++ +W + Q+ K+    + +K AK K   +  T +R V    NSD E TDSRVDEQ SDS+S N SQRGSQP+E+  TSLSTKRRRRK+D+ +ERKRLT+ EL+TIRLAFV HYPPPPSNAQAQGRFEMRYGREMSQAMIQGLWE ELKHWS+RWW+FYT FN +AREKKL KPVDK PTIT KEAEAWAQTFYE HGDAR+ P A   QK   SE P  DP ES
Sbjct:  363 NDMPLGGVAHTAQKEEEISLRRKSAPLHSGDLLSTIPLKKSKHSKPYADRKREGTVRSWTDKNGENESKRKSQQDPPNRVKLEPTKRASRVAKERRSP---------GKPSRARRRKAPMSLIQHSGDENSNESSDEEKGRQRSSTQKKRPGARIVCAGNDGKRRKCASNKNEYDSDDVDFETDHKQCLNPDRERSINKGKTKHFREGSRKSPRLSKKMQQVSTKVPPLRFSGRTRETTRNARNARTTKSLDELVDNEDASAIGNETDSSEDFEIIQSDRRKEFDHRRKKWREGQEAKKGTPNSQRKNAKSKDNSR-LTKRRRVSDKINSDVESTDSRVDEQTSDSESPNASQRGSQPIEINFTSLSTKRRRRKSDYSDERKRLTQDELSTIRLAFVKHYPPPPSNAQAQGRFEMRYGREMSQAMIQGLWENELKHWSDRWWEFYTRFNTVAREKKLQKPVDKKPTITTKEAEAWAQTFYEDHGDARLPPEARFEQKNTTSEKP--DPAES 861
The following BLAST results are available for this feature:
BLAST of Gvermi12220.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0A7_9FLOR2.990e-9946.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 844..869
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..869
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..811

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3881885..3884494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12220.t1Gvermi12220.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3881885..3884494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12220.t1 ID=Gvermi12220.t1|Name=Gvermi12220.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=870bp
MNHLPEDQQVYDPQSNYRVRASFGNSSSSYTPDAYQNEYNGHMYQPNSQP
YALKYPHGFWGASQSGTMPTPSERYRAPPVQAEIHPDQPYTLDVPPSQIP
STTFPAYHTNAPFPPPSQGQPMVLSAQDHLRRLRYTHQASEWHAEMPSRL
IPAEANHSVGWTPRSAAHHQATVDKDETKSFEYSDTLAQRYETRVPPRKS
IIRSVNDLLNTDCPASSHCTSNPIQIGTEQGVLPRYSTSNLTNVAQNDMK
SGDPIESKDEVAAATVAVDSPVELRVEPNLKSEDTKDKSQAKKSSSLFIS
HEPKAVLSNNAAQTTVIPVPSRKRCRDDVPFGGVPRDKRQKEDPALKKQA
AQLYTDDIHSTIPLKKSKFAVPEGINLQTAKAITRKATDEKIPKNTKANK
KRGKLKENKRRFTSYSLIVHSGDESDGNMVNNSSSQPRKRKQPVLISHSD
DEDFVNSESPSKKPDSSGREKTDDNEEDMSGTAKPRTSRKKVQTRMEGTR
KSPRLGKQRKESVLEPAANIPKRPRVIQKNERKRKTTKSLDELSDSNQAQ
HGASDSDDDFVPTSDRGKLFAEQKAQWLKAQQTKEKHSVTPKKVAKRKAK
KQEATGKRDVQKVCNSDGEKTDSRVDEQFSDSDSQNPSQRGSQPLEVKIT
SLSTKRRRRKTDFEEERKRLTESELTTIRLAFVSHYPPPPSNAQAQGRFE
MRYGREMSQAMIQGLWEKELKHWSERWWKFYTGFNDLAREKKLAKPVDKN
PTITKKEAEAWAQTFYEKHGDARISPVAQKPQESEPPSSDPLESSQKQID
KNFGKQYSSVEDSTTGHRKMEVESKFMKTDDDMAPDKNLAADHQAKTDSQ
VLSAGTKGNDTEIGNRTNV*
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