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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12220.t1 ID=Gvermi12220.t1|Name=Gvermi12220.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=870bp MNHLPEDQQVYDPQSNYRVRASFGNSSSSYTPDAYQNEYNGHMYQPNSQP YALKYPHGFWGASQSGTMPTPSERYRAPPVQAEIHPDQPYTLDVPPSQIP STTFPAYHTNAPFPPPSQGQPMVLSAQDHLRRLRYTHQASEWHAEMPSRL IPAEANHSVGWTPRSAAHHQATVDKDETKSFEYSDTLAQRYETRVPPRKS IIRSVNDLLNTDCPASSHCTSNPIQIGTEQGVLPRYSTSNLTNVAQNDMK SGDPIESKDEVAAATVAVDSPVELRVEPNLKSEDTKDKSQAKKSSSLFIS HEPKAVLSNNAAQTTVIPVPSRKRCRDDVPFGGVPRDKRQKEDPALKKQA AQLYTDDIHSTIPLKKSKFAVPEGINLQTAKAITRKATDEKIPKNTKANK KRGKLKENKRRFTSYSLIVHSGDESDGNMVNNSSSQPRKRKQPVLISHSD DEDFVNSESPSKKPDSSGREKTDDNEEDMSGTAKPRTSRKKVQTRMEGTR KSPRLGKQRKESVLEPAANIPKRPRVIQKNERKRKTTKSLDELSDSNQAQ HGASDSDDDFVPTSDRGKLFAEQKAQWLKAQQTKEKHSVTPKKVAKRKAK KQEATGKRDVQKVCNSDGEKTDSRVDEQFSDSDSQNPSQRGSQPLEVKIT SLSTKRRRRKTDFEEERKRLTESELTTIRLAFVSHYPPPPSNAQAQGRFE MRYGREMSQAMIQGLWEKELKHWSERWWKFYTGFNDLAREKKLAKPVDKN PTITKKEAEAWAQTFYEKHGDARISPVAQKPQESEPPSSDPLESSQKQID KNFGKQYSSVEDSTTGHRKMEVESKFMKTDDDMAPDKNLAADHQAKTDSQ VLSAGTKGNDTEIGNRTNV* back to topspliced messenger RNA >Gvermi12220.t1 ID=Gvermi12220.t1|Name=Gvermi12220.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2610bp|location=Sequence derived from alignment at ScGOVlb_3404:3881885..3884494+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAACCATCTTCCAGAAGATCAGCAGGTGTACGATCCTCAAAGCAACTA TAGAGTTAGAGCATCTTTCGGGAACAGCTCCTCATCGTACACACCTGACG CATATCAAAATGAATACAATGGGCACATGTACCAGCCAAACTCTCAGCCG TACGCATTGAAGTACCCACATGGATTTTGGGGAGCATCACAAAGCGGAAC GATGCCCACACCCTCAGAACGATATCGAGCCCCACCAGTTCAAGCGGAAA TACATCCCGACCAACCATACACACTAGATGTGCCCCCATCACAAATCCCA AGCACGACATTTCCGGCCTACCACACCAACGCACCATTTCCTCCGCCATC GCAAGGACAGCCCATGGTTTTGTCAGCACAGGACCATTTGAGGCGGCTGC GATACACTCATCAAGCTTCAGAGTGGCACGCTGAAATGCCATCGCGACTA ATTCCTGCTGAAGCAAACCATTCCGTAGGATGGACTCCCCGTTCCGCCGC GCATCACCAAGCGACGGTGGATAAAGACGAAACGAAGTCGTTCGAATATT CTGACACACTCGCTCAACGGTACGAAACAAGAGTTCCTCCCAGAAAGTCG ATTATACGGTCAGTGAATGACCTGCTTAACACAGACTGTCCCGCTTCGTC TCACTGTACCTCAAATCCGATTCAGATAGGCACGGAGCAGGGAGTATTAC CTCGTTATTCAACCTCTAACTTGACAAATGTAGCGCAAAACGACATGAAA AGTGGTGACCCTATCGAAAGCAAAGATGAGGTTGCAGCCGCGACTGTTGC AGTAGACAGTCCTGTCGAACTTAGGGTTGAGCCAAACCTCAAGTCTGAAG ATACCAAAGATAAGTCCCAGGCAAAAAAATCATCCAGTCTTTTTATTTCA CATGAGCCAAAAGCAGTTCTTTCAAATAATGCTGCGCAGACAACTGTCAT TCCTGTTCCATCCAGGAAGAGATGTAGAGATGATGTACCCTTCGGAGGTG TGCCAAGGGACAAACGACAGAAAGAAGACCCAGCTCTGAAAAAACAGGCA GCCCAATTGTATACTGACGATATTCATTCCACCATCCCGTTAAAGAAATC TAAGTTTGCCGTTCCAGAAGGAATAAACTTGCAGACGGCAAAAGCGATAA CGAGGAAAGCAACGGATGAGAAAATACCAAAAAATACGAAGGCGAACAAG AAGCGCGGAAAGCTGAAGGAAAATAAGCGAAGGTTTACTTCTTACAGCCT CATTGTACATTCCGGTGATGAGAGCGATGGCAATATGGTTAACAATTCAA GTTCCCAGCCAAGAAAACGAAAACAGCCGGTACTTATCTCTCATTCAGAT GATGAAGACTTTGTGAATAGCGAATCGCCCTCGAAGAAACCTGATTCTTC AGGGAGAGAAAAGACGGATGACAATGAGGAAGATATGTCCGGCACAGCAA AACCTCGAACGTCTAGGAAGAAGGTTCAAACTCGCATGGAGGGTACCAGA AAATCCCCACGTTTAGGAAAGCAAAGGAAAGAGTCTGTGTTGGAACCTGC AGCAAATATTCCAAAACGACCAAGAGTGATTCAAAAGAATGAACGAAAAA GGAAGACGACGAAAAGCCTTGATGAACTTTCAGATTCAAACCAAGCCCAA CACGGTGCGTCGGACAGTGATGATGACTTTGTCCCCACTTCAGACCGAGG AAAGTTGTTTGCGGAGCAGAAAGCACAATGGCTCAAGGCCCAGCAGACAA AGGAAAAGCATTCCGTAACTCCCAAGAAAGTGGCaaaacgaaaagcgaaa aagcaagaggcaacaggaaaacgaGATGTTCAGAAAGTCTGTAATAGTGA CGGGGAAAAGACTGATAGTCGAGTTGATGAGCAATTCTCAGATTCAGATT CACAAAACCCTTCTCAGAGGGGCAGCCAGCCTCTCGAAGTGAAAATTACT TCACTTTCCACGAAGAGACGTAGGAGAAAAACTGATTTCGAAGAAGAGAG AAAGCGCCTTACAGAGAGTGAACTGACTACAATACGACTGGCATTTGTGT CTCATTACCCTCCTCCACCGTCCAATGCTCAAGCTCAAGGACGATTTGAA ATGAGATACGGTCGTGAAATGTCACAAGCTATGATCCAAGGCCTGTGGGA GAAGGAGCTCAAACACTGGAGCGAGCGATGGTGGAAATTCTACACCGGCT TCAATGACTTAGCAAGAGAAAAGAAACTAGCAAAACCTGTGGACAAGAAT CCCACCATAACCAAGAAAGAAGCAGAGGCGTGGGCTCAGACCTTCTATGA GAAACATGGCGACGCTAGAATTTCTCCCGTGGCTCAGAAGCCCCAAGAAA GCGAGCCACCATCCTCTGACCCATTGGAATCTTCCCAAAAGCAAATAGAT AAGAATTTCGGGAAACAATATAGTTCAGTCGAGGACTCGACCACAGGCCA CCGCAAGATGGAAGTAGAATCAAAGTTTATGAAAACAGACGATGATATGG CTCCCGACAAGAATTTAGCAGCGGACCATCAAGCAAAAACTGATTCGCAA GTGCTATCGGCAGGCACGAAAGGCAATGATACTGAGATTGGAAACAGAAC AAATGTGTAA back to topprotein sequence of Gvermi12220.t1 >Gvermi12220.t1 ID=Gvermi12220.t1|Name=Gvermi12220.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=870bp
MNHLPEDQQVYDPQSNYRVRASFGNSSSSYTPDAYQNEYNGHMYQPNSQP YALKYPHGFWGASQSGTMPTPSERYRAPPVQAEIHPDQPYTLDVPPSQIP STTFPAYHTNAPFPPPSQGQPMVLSAQDHLRRLRYTHQASEWHAEMPSRL IPAEANHSVGWTPRSAAHHQATVDKDETKSFEYSDTLAQRYETRVPPRKS IIRSVNDLLNTDCPASSHCTSNPIQIGTEQGVLPRYSTSNLTNVAQNDMK SGDPIESKDEVAAATVAVDSPVELRVEPNLKSEDTKDKSQAKKSSSLFIS HEPKAVLSNNAAQTTVIPVPSRKRCRDDVPFGGVPRDKRQKEDPALKKQA AQLYTDDIHSTIPLKKSKFAVPEGINLQTAKAITRKATDEKIPKNTKANK KRGKLKENKRRFTSYSLIVHSGDESDGNMVNNSSSQPRKRKQPVLISHSD DEDFVNSESPSKKPDSSGREKTDDNEEDMSGTAKPRTSRKKVQTRMEGTR KSPRLGKQRKESVLEPAANIPKRPRVIQKNERKRKTTKSLDELSDSNQAQ HGASDSDDDFVPTSDRGKLFAEQKAQWLKAQQTKEKHSVTPKKVAKRKAK KQEATGKRDVQKVCNSDGEKTDSRVDEQFSDSDSQNPSQRGSQPLEVKIT SLSTKRRRRKTDFEEERKRLTESELTTIRLAFVSHYPPPPSNAQAQGRFE MRYGREMSQAMIQGLWEKELKHWSERWWKFYTGFNDLAREKKLAKPVDKN PTITKKEAEAWAQTFYEKHGDARISPVAQKPQESEPPSSDPLESSQKQID KNFGKQYSSVEDSTTGHRKMEVESKFMKTDDDMAPDKNLAADHQAKTDSQ VLSAGTKGNDTEIGNRTNV* back to topmRNA from alignment at ScGOVlb_3404:3881885..3884494+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12220.t1 ID=Gvermi12220.t1|Name=Gvermi12220.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2610bp|location=Sequence derived from alignment at ScGOVlb_3404:3881885..3884494+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGAACCATCTTCCAGAAGATCAGCAGGTGTACGATCCTCAAAGCAACTA
TAGAGTTAGAGCATCTTTCGGGAACAGCTCCTCATCGTACACACCTGACG
CATATCAAAATGAATACAATGGGCACATGTACCAGCCAAACTCTCAGCCG
TACGCATTGAAGTACCCACATGGATTTTGGGGAGCATCACAAAGCGGAAC
GATGCCCACACCCTCAGAACGATATCGAGCCCCACCAGTTCAAGCGGAAA
TACATCCCGACCAACCATACACACTAGATGTGCCCCCATCACAAATCCCA
AGCACGACATTTCCGGCCTACCACACCAACGCACCATTTCCTCCGCCATC
GCAAGGACAGCCCATGGTTTTGTCAGCACAGGACCATTTGAGGCGGCTGC
GATACACTCATCAAGCTTCAGAGTGGCACGCTGAAATGCCATCGCGACTA
ATTCCTGCTGAAGCAAACCATTCCGTAGGATGGACTCCCCGTTCCGCCGC
GCATCACCAAGCGACGGTGGATAAAGACGAAACGAAGTCGTTCGAATATT
CTGACACACTCGCTCAACGGTACGAAACAAGAGTTCCTCCCAGAAAGTCG
ATTATACGGTCAGTGAATGACCTGCTTAACACAGACTGTCCCGCTTCGTC
TCACTGTACCTCAAATCCGATTCAGATAGGCACGGAGCAGGGAGTATTAC
CTCGTTATTCAACCTCTAACTTGACAAATGTAGCGCAAAACGACATGAAA
AGTGGTGACCCTATCGAAAGCAAAGATGAGGTTGCAGCCGCGACTGTTGC
AGTAGACAGTCCTGTCGAACTTAGGGTTGAGCCAAACCTCAAGTCTGAAG
ATACCAAAGATAAGTCCCAGGCAAAAAAATCATCCAGTCTTTTTATTTCA
CATGAGCCAAAAGCAGTTCTTTCAAATAATGCTGCGCAGACAACTGTCAT
TCCTGTTCCATCCAGGAAGAGATGTAGAGATGATGTACCCTTCGGAGGTG
TGCCAAGGGACAAACGACAGAAAGAAGACCCAGCTCTGAAAAAACAGGCA
GCCCAATTGTATACTGACGATATTCATTCCACCATCCCGTTAAAGAAATC
TAAGTTTGCCGTTCCAGAAGGAATAAACTTGCAGACGGCAAAAGCGATAA
CGAGGAAAGCAACGGATGAGAAAATACCAAAAAATACGAAGGCGAACAAG
AAGCGCGGAAAGCTGAAGGAAAATAAGCGAAGGTTTACTTCTTACAGCCT
CATTGTACATTCCGGTGATGAGAGCGATGGCAATATGGTTAACAATTCAA
GTTCCCAGCCAAGAAAACGAAAACAGCCGGTACTTATCTCTCATTCAGAT
GATGAAGACTTTGTGAATAGCGAATCGCCCTCGAAGAAACCTGATTCTTC
AGGGAGAGAAAAGACGGATGACAATGAGGAAGATATGTCCGGCACAGCAA
AACCTCGAACGTCTAGGAAGAAGGTTCAAACTCGCATGGAGGGTACCAGA
AAATCCCCACGTTTAGGAAAGCAAAGGAAAGAGTCTGTGTTGGAACCTGC
AGCAAATATTCCAAAACGACCAAGAGTGATTCAAAAGAATGAACGAAAAA
GGAAGACGACGAAAAGCCTTGATGAACTTTCAGATTCAAACCAAGCCCAA
CACGGTGCGTCGGACAGTGATGATGACTTTGTCCCCACTTCAGACCGAGG
AAAGTTGTTTGCGGAGCAGAAAGCACAATGGCTCAAGGCCCAGCAGACAA
AGGAAAAGCATTCCGTAACTCCCAAGAAAGTGGCaaaacgaaaagcgaaa
aagcaagaggcaacaggaaaacgaGATGTTCAGAAAGTCTGTAATAGTGA
CGGGGAAAAGACTGATAGTCGAGTTGATGAGCAATTCTCAGATTCAGATT
CACAAAACCCTTCTCAGAGGGGCAGCCAGCCTCTCGAAGTGAAAATTACT
TCACTTTCCACGAAGAGACGTAGGAGAAAAACTGATTTCGAAGAAGAGAG
AAAGCGCCTTACAGAGAGTGAACTGACTACAATACGACTGGCATTTGTGT
CTCATTACCCTCCTCCACCGTCCAATGCTCAAGCTCAAGGACGATTTGAA
ATGAGATACGGTCGTGAAATGTCACAAGCTATGATCCAAGGCCTGTGGGA
GAAGGAGCTCAAACACTGGAGCGAGCGATGGTGGAAATTCTACACCGGCT
TCAATGACTTAGCAAGAGAAAAGAAACTAGCAAAACCTGTGGACAAGAAT
CCCACCATAACCAAGAAAGAAGCAGAGGCGTGGGCTCAGACCTTCTATGA
GAAACATGGCGACGCTAGAATTTCTCCCGTGGCTCAGAAGCCCCAAGAAA
GCGAGCCACCATCCTCTGACCCATTGGAATCTTCCCAAAAGCAAATAGAT
AAGAATTTCGGGAAACAATATAGTTCAGTCGAGGACTCGACCACAGGCCA
CCGCAAGATGGAAGTAGAATCAAAGTTTATGAAAACAGACGATGATATGG
CTCCCGACAAGAATTTAGCAGCGGACCATCAAGCAAAAACTGATTCGCAA
GTGCTATCGGCAGGCACGAAAGGCAATGATACTGAGATTGGAAACAGAAC
AAATGTGTAA back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:3881885..3884494+ >Gvermi12220.t1 ID=Gvermi12220.t1|Name=Gvermi12220.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2610bp|location=Sequence derived from alignment at ScGOVlb_3404:3881885..3884494+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGAACCATCTTCCAGAAGATCAGCAGGTGTACGATCCTCAAAGCAACTA TAGAGTTAGAGCATCTTTCGGGAACAGCTCCTCATCGTACACACCTGACG CATATCAAAATGAATACAATGGGCACATGTACCAGCCAAACTCTCAGCCG TACGCATTGAAGTACCCACATGGATTTTGGGGAGCATCACAAAGCGGAAC GATGCCCACACCCTCAGAACGATATCGAGCCCCACCAGTTCAAGCGGAAA TACATCCCGACCAACCATACACACTAGATGTGCCCCCATCACAAATCCCA AGCACGACATTTCCGGCCTACCACACCAACGCACCATTTCCTCCGCCATC GCAAGGACAGCCCATGGTTTTGTCAGCACAGGACCATTTGAGGCGGCTGC GATACACTCATCAAGCTTCAGAGTGGCACGCTGAAATGCCATCGCGACTA ATTCCTGCTGAAGCAAACCATTCCGTAGGATGGACTCCCCGTTCCGCCGC GCATCACCAAGCGACGGTGGATAAAGACGAAACGAAGTCGTTCGAATATT CTGACACACTCGCTCAACGGTACGAAACAAGAGTTCCTCCCAGAAAGTCG ATTATACGGTCAGTGAATGACCTGCTTAACACAGACTGTCCCGCTTCGTC TCACTGTACCTCAAATCCGATTCAGATAGGCACGGAGCAGGGAGTATTAC CTCGTTATTCAACCTCTAACTTGACAAATGTAGCGCAAAACGACATGAAA AGTGGTGACCCTATCGAAAGCAAAGATGAGGTTGCAGCCGCGACTGTTGC AGTAGACAGTCCTGTCGAACTTAGGGTTGAGCCAAACCTCAAGTCTGAAG ATACCAAAGATAAGTCCCAGGCAAAAAAATCATCCAGTCTTTTTATTTCA CATGAGCCAAAAGCAGTTCTTTCAAATAATGCTGCGCAGACAACTGTCAT TCCTGTTCCATCCAGGAAGAGATGTAGAGATGATGTACCCTTCGGAGGTG TGCCAAGGGACAAACGACAGAAAGAAGACCCAGCTCTGAAAAAACAGGCA GCCCAATTGTATACTGACGATATTCATTCCACCATCCCGTTAAAGAAATC TAAGTTTGCCGTTCCAGAAGGAATAAACTTGCAGACGGCAAAAGCGATAA CGAGGAAAGCAACGGATGAGAAAATACCAAAAAATACGAAGGCGAACAAG AAGCGCGGAAAGCTGAAGGAAAATAAGCGAAGGTTTACTTCTTACAGCCT CATTGTACATTCCGGTGATGAGAGCGATGGCAATATGGTTAACAATTCAA GTTCCCAGCCAAGAAAACGAAAACAGCCGGTACTTATCTCTCATTCAGAT GATGAAGACTTTGTGAATAGCGAATCGCCCTCGAAGAAACCTGATTCTTC AGGGAGAGAAAAGACGGATGACAATGAGGAAGATATGTCCGGCACAGCAA AACCTCGAACGTCTAGGAAGAAGGTTCAAACTCGCATGGAGGGTACCAGA AAATCCCCACGTTTAGGAAAGCAAAGGAAAGAGTCTGTGTTGGAACCTGC AGCAAATATTCCAAAACGACCAAGAGTGATTCAAAAGAATGAACGAAAAA GGAAGACGACGAAAAGCCTTGATGAACTTTCAGATTCAAACCAAGCCCAA CACGGTGCGTCGGACAGTGATGATGACTTTGTCCCCACTTCAGACCGAGG AAAGTTGTTTGCGGAGCAGAAAGCACAATGGCTCAAGGCCCAGCAGACAA AGGAAAAGCATTCCGTAACTCCCAAGAAAGTGGCaaaacgaaaagcgaaa aagcaagaggcaacaggaaaacgaGATGTTCAGAAAGTCTGTAATAGTGA CGGGGAAAAGACTGATAGTCGAGTTGATGAGCAATTCTCAGATTCAGATT CACAAAACCCTTCTCAGAGGGGCAGCCAGCCTCTCGAAGTGAAAATTACT TCACTTTCCACGAAGAGACGTAGGAGAAAAACTGATTTCGAAGAAGAGAG AAAGCGCCTTACAGAGAGTGAACTGACTACAATACGACTGGCATTTGTGT CTCATTACCCTCCTCCACCGTCCAATGCTCAAGCTCAAGGACGATTTGAA ATGAGATACGGTCGTGAAATGTCACAAGCTATGATCCAAGGCCTGTGGGA GAAGGAGCTCAAACACTGGAGCGAGCGATGGTGGAAATTCTACACCGGCT TCAATGACTTAGCAAGAGAAAAGAAACTAGCAAAACCTGTGGACAAGAAT CCCACCATAACCAAGAAAGAAGCAGAGGCGTGGGCTCAGACCTTCTATGA GAAACATGGCGACGCTAGAATTTCTCCCGTGGCTCAGAAGCCCCAAGAAA GCGAGCCACCATCCTCTGACCCATTGGAATCTTCCCAAAAGCAAATAGAT AAGAATTTCGGGAAACAATATAGTTCAGTCGAGGACTCGACCACAGGCCA CCGCAAGATGGAAGTAGAATCAAAGTTTATGAAAACAGACGATGATATGG CTCCCGACAAGAATTTAGCAGCGGACCATCAAGCAAAAACTGATTCGCAA GTGCTATCGGCAGGCACGAAAGGCAATGATACTGAGATTGGAAACAGAAC AAATGTGTAA back to top
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