Gvermi12205.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12205.t1
Unique NameGvermi12205.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length89
Homology
[Close]
BLAST of Gvermi12205.t1 vs. uniprot
Match: A0A2V3IMR7_9FLOR (Krueppel-like factor 16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR7_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 6.580e-27
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:    1 MEVQPMLQLEDFSEHVFSLDVKHTDAPPLHLSIGLEDVVSIMDDTEQ-SGLFSQYGGG-CAALTGLDSRFGVFDLDGLQGVGLSAKIEGL 88
            M+ Q ML+L++FSEHV SLDV+H D P L + IGLEDV SIMDD +Q  GLFSQYGG  CA LT LD+RFG FDLD LQ  G++  +EGL
Sbjct:  263 MDSQRMLELDEFSEHVLSLDVRHADGPCLQMQIGLEDVASIMDDADQCGGLFSQYGGATCANLTPLDTRFGPFDLDNLQAFGMNTTVEGL 352
The following BLAST results are available for this feature:
BLAST of Gvermi12205.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMR7_9FLOR6.580e-2763.33Krueppel-like factor 16 n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3844844..3845110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12205.t1Gvermi12205.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3844844..3845110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12205.t1 ID=Gvermi12205.t1|Name=Gvermi12205.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=89bp
MEVQPMLQLEDFSEHVFSLDVKHTDAPPLHLSIGLEDVVSIMDDTEQSGL
FSQYGGGCAALTGLDSRFGVFDLDGLQGVGLSAKIEGL*
back to top