Gvermi11533.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11533.t1
Unique NameGvermi11533.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length428
Homology
BLAST of Gvermi11533.t1 vs. uniprot
Match: A0A2V3IJX0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJX0_9FLOR)

HSP 1 Score: 274 bits (701), Expect = 1.690e-85
Identity = 159/354 (44.92%), Postives = 217/354 (61.30%), Query Frame = 0
Query:   52 LLRCLKCNATVPRRASRLRKWIDFFFLYLIGMYELLRQWLCTVRIRDDYVIQFYKDIDVRKPIIVMSGVTSGIGSELMRHFLATSAHVIALSYHPRPAFNRKYTMLTVDFESEESTLAAAKDLIALLRHVSQDRDVIFVHCAAVYNP----PDANDSNSVQRTLLINTLLPAAFIESISSAINGMICIGSSSQKVSPNLK-QGCILTAARSPYAAYPLSKLLNLVHATDWKKRSSKPCIVIHPGIVATKLYQNESGIVGAVLRLFVYYFAWDVETSALRILHLLEASGFLETMGRCSRREDFLNSTDYSGVYWDSVSLKASSIPREVHKYYLRGLARHILQITEQNFQQISQTP 400
            +LRC  C    P++ S +R   +F  LYL+G+YEL+RQW  +V +  D        I  +K +IV+SGVTSGIG EL+   L TSA VIAL++      +     + +DFES EST A    L+A L  +   R  I++HCAAVYNP     +     SV+RTLL NT +PAAFIE I+S ++G++ IGSSSQK +     + C+L AA+SPY AYP+SKLL+L+H  DW  R+ KPCIVIHPGIVAT+LY  + G++GA+LR FV  FAW+ ETSA RI  +L+ S F + M     R++ +  T+   VYWD V++  S+ P +V K     LA HI  I   +    S+ P
Sbjct:    2 VLRCNLCGCGAPQQPS-VRVIFEFIALYLVGIYELIRQWFFSVPLSSDCNTVLQDVIRDQKLVIVLSGVTSGIGRELLHSLLRTSADVIALTHPSTTVKDPGCKQVMIDFESIESTTAVINKLLAELTSLPP-RKAIYIHCAAVYNPLPLVSNGYSLTSVERTLLTNTFIPAAFIEGIASVVSGVVYIGSSSQKAASRFDIRHCLLQAAQSPYGAYPVSKLLSLLHIADWGVRTGKPCIVIHPGIVATRLYHTQKGLIGAILRGFVSQFAWNAETSATRIFKVLQRSRFFD-MAMSGSRKNTVRITNEYYVYWDCVTMDVSAPPAQVPKSETSTLAMHIHHILMDSSLVCSKKP 352          
BLAST of Gvermi11533.t1 vs. uniprot
Match: R7QFZ1_CHOCR (Epimerase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFZ1_CHOCR)

HSP 1 Score: 194 bits (494), Expect = 9.550e-55
Identity = 131/354 (37.01%), Postives = 193/354 (54.52%), Query Frame = 0
Query:   52 LLRCLKCNATVPRRASRLRKWIDFFFLYLIGMYELLRQWLCTVRIRDDYVIQFYKDIDVRKP--------IIVMSGVTSGIGSELMRHFLATSAHVIALSYHPRPAFNRKYTMLTVDFESEESTLAAAKDLIALLRHVSQDRDVIFVHCAAVYNPP-DANDSNS--VQRTLLINTLLPAAFIESISSAINGMICIGSSSQKVSPNLKQG-CILTAARSPYAAYPLSKLLNLVHATDWKKRSSKPCIVIHPGIVATKLYQNESGIVGAVLRLFVYYFAWDVETSALRILHLLEASGFLETMGRCSRREDFLNSTDYS-GVYWDSVSLKASSIPREVHKYYLRG-LARHILQITEQ 391
            + RC      V   +S  R  +DF  LY+ G YELLRQ      I   Y     +  +   P        +I+++G ++GIG EL++  LA    V+A++++      RK   + VDF S  ST      L  ++  +   R VI VHCAAV +P  +AN S S  V RTL IN L+P  F++ +S  ++G++ IGSS+Q ++PNL    C +  A++P++AYPLSKLL  V A  W   +SKP +VIHPG+VAT LY++E G+VG +LR  + +FAW    SA RIL L+   GF   +    +R D   +   S  VYWDSV++    +P ++     R  +A  +  ITE+
Sbjct:    1 MTRCNFGGCRVEEYSSFWRWIVDFLTLYVFGCYELLRQ-----LISSSY--PHARHCEPAPPSGFGGTNSLILLTGCSTGIGYELLKQLLAAELDVVAITHNQDAGLPRKCKQVVVDFGSTSSTENGCITLSGIVEELGAKRPVILVHCAAVLHPKTNANYSASTIVTRTLTINLLMPMLFVKRLSELLSGIVWIGSSTQYIAPNLFDSQCPMHVAKTPFSAYPLSKLLAFVFAERWSIINSKPVVVIHPGVVATGLYRDERGLVGKILRRMMPFFAWTPAFSARRILQLVSYGGFFHHL---EKRFDPSGAPQGSIPVYWDSVTMGPGLLPLQILDQGQRNKIAEALSHITER 344          
The following BLAST results are available for this feature:
BLAST of Gvermi11533.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJX0_9FLOR1.690e-8544.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QFZ1_CHOCR9.550e-5537.01Epimerase domain-containing protein n=1 Tax=Chondr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 108..356
e-value: 5.3E-18
score: 67.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..427
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..71
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 113..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:752894..754177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11533.t1Gvermi11533.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 752894..754177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11533.t1 ID=Gvermi11533.t1|Name=Gvermi11533.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=428bp
MFKARIKRFSTTSYLPNTFCHSSPTSAVKELTGSPGSAVMNASPDKARNG
KLLRCLKCNATVPRRASRLRKWIDFFFLYLIGMYELLRQWLCTVRIRDDY
VIQFYKDIDVRKPIIVMSGVTSGIGSELMRHFLATSAHVIALSYHPRPAF
NRKYTMLTVDFESEESTLAAAKDLIALLRHVSQDRDVIFVHCAAVYNPPD
ANDSNSVQRTLLINTLLPAAFIESISSAINGMICIGSSSQKVSPNLKQGC
ILTAARSPYAAYPLSKLLNLVHATDWKKRSSKPCIVIHPGIVATKLYQNE
SGIVGAVLRLFVYYFAWDVETSALRILHLLEASGFLETMGRCSRREDFLN
STDYSGVYWDSVSLKASSIPREVHKYYLRGLARHILQITEQNFQQISQTP
SGVAESLAVRHRDLTPLGEKQTAPMQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf