Gvermi12117.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12117.t1
Unique NameGvermi12117.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length169
Homology
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BLAST of Gvermi12117.t1 vs. uniprot
Match: A0A2V3J6B9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6B9_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 1.030e-37
Identity = 84/141 (59.57%), Postives = 112/141 (79.43%), Query Frame = 0 
Query:   21 MARVSKKALRPRLYVLGRLSPERIHRLQGGVRKLLQKERLEALKARAAVRAVERTEAQRHAENIIAGVQ--ETDPGNEQIRALVKELEELRQKKHNLFAALKKKLDEEAASKRATPGANG--ANGVSNTPARTSNDANADQ 157
            MARVSKKALRPR YVLGRL PE++ +LQ GV+KLL++ER EAL ARA VRAVERTEAQ+HAENI+ GV+  E+  GNE IR+LV+ELEEL+QK+ +LFAALKK L+++A  ++    ANG  +N VS T  +++++ + D+
Sbjct:   31 MARVSKKALRPRSYVLGRLPPEKLIKLQQGVQKLLERERHEALVARARVRAVERTEAQKHAENILNGVKDGESSGGNEHIRSLVRELEELKQKRSDLFAALKKGLEDDATGRKNAVCANGTGSNEVSETVMKSNSNGSVDR 171
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BLAST of Gvermi12117.t1 vs. uniprot
Match: R7Q5B0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5B0_CHOCR)

HSP 1 Score: 105 bits (262), Expect = 6.380e-26
Identity = 65/110 (59.09%), Postives = 76/110 (69.09%), Query Frame = 0 
Query:   21 MARVSKKALRPRLYVLGRLSPERIHRLQGGVRKLLQKERLEALKARAAVRAVERTEAQRHAENIIAGVQETDPGNEQIRALVKELEELRQKKHNLFAALKKKLDEEAASK 130
            MARVS+KALRPR YV  RLS ERI +L  GVRKL++KER  A +AR             HAENIIAGVQ  DP +E IRAL KELEELR+KK  L+  LKKKL+++ A K
Sbjct:    1 MARVSEKALRPREYVFNRLSAERIAQLTPGVRKLMRKEREAAAQARXXXXXXXXXXXXXHAENIIAGVQTPDPESEAIRALEKELEELREKKRRLYVQLKKKLEKDGAHK 110
The following BLAST results are available for this feature:
BLAST of Gvermi12117.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6B9_9FLOR1.030e-3759.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5B0_CHOCR6.380e-2659.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3458242..3458748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12117.t1Gvermi12117.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3458242..3458748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12117.t1 ID=Gvermi12117.t1|Name=Gvermi12117.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=169bp
MRQLSTLNCNQTCQTAFPTQMARVSKKALRPRLYVLGRLSPERIHRLQGG
VRKLLQKERLEALKARAAVRAVERTEAQRHAENIIAGVQETDPGNEQIRA
LVKELEELRQKKHNLFAALKKKLDEEAASKRATPGANGANGVSNTPARTS
NDANADQTLSANHATNAN*
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