Gvermi12217.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12217.t1
Unique NameGvermi12217.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length159
Homology
BLAST of Gvermi12217.t1 vs. uniprot
Match: M2XUB3_GALSU (V-type proton ATPase proteolipid subunit n=2 Tax=Rhodophyta TaxID=2763 RepID=M2XUB3_GALSU)

HSP 1 Score: 256 bits (655), Expect = 1.330e-85
Identity = 143/156 (91.67%), Postives = 149/156 (95.51%), Query Frame = 0
Query:    3 CDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSSVTTC 158
            C PAASFFGF GAASAL+FSNLGAAYGTAK+GVGVASMGVMRPELVMR IIPVVMAGVLGIYGLIVAVILVGQIAETNYP+F+GFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFV MILILIFAEALALYGLIVALIL+GK+S   C
Sbjct:    4 CPPAASFFGFIGAASALVFSNLGAAYGTAKSGVGVASMGVMRPELVMRSIIPVVMAGVLGIYGLIVAVILVGQIAETNYPYFLGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVGMILILIFAEALALYGLIVALILSGKTSSAGC 159          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A0A7S0ZJY0_9RHOD (V-type proton ATPase proteolipid subunit n=2 Tax=Rhodophyta TaxID=2763 RepID=A0A7S0ZJY0_9RHOD)

HSP 1 Score: 253 bits (645), Expect = 4.290e-84
Identity = 140/158 (88.61%), Postives = 148/158 (93.67%), Query Frame = 0
Query:    1 MPCDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSSVTTC 158
            M C PAASFFGF GAASAL+FSNLGAAYGTAK+GVGVASMGVMRPELVMR IIPVVMAGVLGIYGLIVAVILVGQ+AE  YP+F+GFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFV MILILIFAEALALYGLIVALIL+GK++   C
Sbjct:    1 MSCPPAASFFGFIGAASALVFSNLGAAYGTAKSGVGVASMGVMRPELVMRSIIPVVMAGVLGIYGLIVAVILVGQVAEEGYPYFMGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVGMILILIFAEALALYGLIVALILSGKTTTVGC 158          
BLAST of Gvermi12217.t1 vs. uniprot
Match: Q9S766_NEOYE (V-type proton ATPase proteolipid subunit n=2 Tax=Bangiaceae TaxID=31345 RepID=Q9S766_NEOYE)

HSP 1 Score: 249 bits (636), Expect = 1.120e-82
Identity = 135/156 (86.54%), Postives = 146/156 (93.59%), Query Frame = 0
Query:    3 CDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSSVTTC 158
            C PAASFFGF GAASALIFSNLGAAYGTAK+GVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVI+ GQ+ E NYP+F+GFAHLASGL+NGLSGLAAGICIGIVGDAGVRAT Q PKL+V+MILILIFAEALALYGLIVALIL+GK++   C
Sbjct:    6 CPPAASFFGFMGAASALIFSNLGAAYGTAKSGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVIVSGQVVEENYPYFLGFAHLASGLSNGLSGLAAGICIGIVGDAGVRATGQNPKLYVIMILILIFAEALALYGLIVALILSGKTTTAGC 161          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A0A5J4YYW2_PORPP (V-type proton ATPase proteolipid subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYW2_PORPP)

HSP 1 Score: 251 bits (640), Expect = 1.860e-82
Identity = 139/154 (90.26%), Postives = 147/154 (95.45%), Query Frame = 0
Query:    1 MPCDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSS 154
            M C PAASFFGF GAA+AL+FSNLGAAYGTAK+GVGVASMGVMRPELVMR IIPVVMAGVLGIYGLIVAVILVGQ+AE  YP+F+GFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFV MILILIFAEALALYGLIVALIL+GK+S
Sbjct:   18 MSCPPAASFFGFMGAAAALVFSNLGAAYGTAKSGVGVASMGVMRPELVMRSIIPVVMAGVLGIYGLIVAVILVGQVAEDGYPYFMGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVGMILILIFAEALALYGLIVALILSGKTS 171          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A0A1X6NJW8_PORUM (V-type proton ATPase proteolipid subunit n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJW8_PORUM)

HSP 1 Score: 229 bits (585), Expect = 7.240e-74
Identity = 119/156 (76.28%), Postives = 140/156 (89.74%), Query Frame = 0
Query:    3 CDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSSVTTC 158
            C PAA FFGF GAASAL+FSNLGAAYGTAK+GVGV+ MGV+RPELVMRC++PV MAGVLGIYGLIVA+I+ GQ+ E NY +++GFAHLA+GL NGLS LAAGIC+GIVGDAGVRAT Q PKL+V+M+LILIFAEALALYGLIVAL++AGK++   C
Sbjct:   79 CPPAAPFFGFMGAASALVFSNLGAAYGTAKSGVGVSHMGVLRPELVMRCVLPVAMAGVLGIYGLIVAIIVSGQVLEHNYSYYLGFAHLAAGLTNGLSSLAAGICVGIVGDAGVRATGQNPKLYVIMVLILIFAEALALYGLIVALVVAGKTTTIRC 234          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A0A7S1T874_9RHOD (V-type proton ATPase proteolipid subunit (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T874_9RHOD)

HSP 1 Score: 225 bits (573), Expect = 4.260e-73
Identity = 123/152 (80.92%), Postives = 139/152 (91.45%), Query Frame = 0
Query:    3 CDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSS 154
            C PAA FFGF GAAS+L+FS LGAAYGTAKAGVGVASMGVMRPELVMR I+P +MAG+LGIYGLIV+VILVGQ+ E +YP++ GFAHLASGL+ GL+ LAAGICIGIVGDAGVRATAQQPKLFV M LILIFAEALALYGLIVA+IL+GK++
Sbjct:    6 CPPAAPFFGFMGAASSLVFSVLGAAYGTAKAGVGVASMGVMRPELVMRSILPCIMAGILGIYGLIVSVILVGQVTEDSYPYYSGFAHLASGLSIGLAALAAGICIGIVGDAGVRATAQQPKLFVGMTLILIFAEALALYGLIVAIILSGKTA 157          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A0A7J7IL98_9RHOD (V-type proton ATPase proteolipid subunit n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IL98_9RHOD)

HSP 1 Score: 222 bits (566), Expect = 5.470e-72
Identity = 118/156 (75.64%), Postives = 141/156 (90.38%), Query Frame = 0
Query:    3 CDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSSVTTC 158
            C PAA+FFGF GAA+AL+FSN+GAAYGTAK+GVG+A++GV+RPEL+MR IIP VMAG+LGIYGLIVAVIL GQI + +YP+++GFAHL++GLA GLSGLAA ICIG+VGDAGVRATAQQPK+F   ILILIFAEALALYGLIVALIL+GK++   C
Sbjct:    8 CPPAAAFFGFIGAAAALVFSNMGAAYGTAKSGVGIAAVGVLRPELIMRSIIPTVMAGILGIYGLIVAVILAGQIGQQSYPYYLGFAHLSAGLAMGLSGLAAXICIGVVGDAGVRATAQQPKVFTGFILILIFAEALALYGLIVALILSGKTASGGC 163          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A0A7S3EKU8_9RHOD (V-type proton ATPase proteolipid subunit n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKU8_9RHOD)

HSP 1 Score: 207 bits (526), Expect = 3.060e-66
Identity = 110/126 (87.30%), Postives = 118/126 (93.65%), Query Frame = 0
Query:    1 MPCDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFV 126
            M C PAASFFGF GA +A++FSNLGAAYGTAK+GVGVASMGVMRPELVMR IIPVVMAGVLGIYGLIVAVILVGQ+ E +YP+F GFAHLASGL+NGLSGLAAGICIGIVGDAGVRATAQQPKLFV
Sbjct:    1 MSCPPAASFFGFMGATAAVVFSNLGAAYGTAKSGVGVASMGVMRPELVMRSIIPVVMAGVLGIYGLIVAVILVGQVTEGDYPYFSGFAHLASGLSNGLSGLAAGICIGIVGDAGVRATAQQPKLFV 126          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A0A5B8MWW4_9CHLO (V-type proton ATPase proteolipid subunit n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MWW4_9CHLO)

HSP 1 Score: 202 bits (515), Expect = 2.690e-64
Identity = 110/151 (72.85%), Postives = 133/151 (88.08%), Query Frame = 0
Query:    4 DPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSS 154
            D  A FFGF GAA+AL+FS++GAAYGTAK+GVG+A+MGVMRPELVM+ I+PVVMAGVLGIYG I++V++  ++A  +Y  F G+AHLASGLA GLSGL+AG+ IG+VGD+GVRA AQQPKLFV MILILIFAEALALYGLIV +IL+GKSS
Sbjct:    6 DSTAPFFGFIGAAAALVFSSMGAAYGTAKSGVGIAAMGVMRPELVMKSIVPVVMAGVLGIYGFIISVLIAQKVAPQDYKMFDGYAHLASGLACGLSGLSAGMAIGVVGDSGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSGKSS 156          
BLAST of Gvermi12217.t1 vs. uniprot
Match: A4S062_OSTLU (V-type proton ATPase proteolipid subunit n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S062_OSTLU)

HSP 1 Score: 200 bits (508), Expect = 3.230e-63
Identity = 111/154 (72.08%), Postives = 130/154 (84.42%), Query Frame = 0
Query:    4 DPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMRCIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSGLAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILAGKSSVTT 157
            D  A FFGF GA SAL+FS +GAAYGTAK+GVG+ASMGVMRPELVM+ I+PVVMAGVLGIYGLI+AV++   I  ++Y  F G+AHL SGLA GLSGL+AG+CIGIVGDAGVRA AQQPKLFV +ILILIFAEALALYG+IV +IL+  +S  T
Sbjct:    5 DEVAPFFGFMGATSALVFSCMGAAYGTAKSGVGIASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVVISTNIDASSYTLFQGYAHLGSGLACGLSGLSAGMCIGIVGDAGVRANAQQPKLFVGVILILIFAEALALYGMIVGIILSSAASAAT 158          
The following BLAST results are available for this feature:
BLAST of Gvermi12217.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2XUB3_GALSU1.330e-8591.67V-type proton ATPase proteolipid subunit n=2 Tax=R... [more]
A0A7S0ZJY0_9RHOD4.290e-8488.61V-type proton ATPase proteolipid subunit n=2 Tax=R... [more]
Q9S766_NEOYE1.120e-8286.54V-type proton ATPase proteolipid subunit n=2 Tax=B... [more]
A0A5J4YYW2_PORPP1.860e-8290.26V-type proton ATPase proteolipid subunit n=1 Tax=P... [more]
A0A1X6NJW8_PORUM7.240e-7476.28V-type proton ATPase proteolipid subunit n=2 Tax=P... [more]
A0A7S1T874_9RHOD4.260e-7380.92V-type proton ATPase proteolipid subunit (Fragment... [more]
A0A7J7IL98_9RHOD5.470e-7275.64V-type proton ATPase proteolipid subunit n=2 Tax=C... [more]
A0A7S3EKU8_9RHOD3.060e-6687.30V-type proton ATPase proteolipid subunit n=1 Tax=R... [more]
A0A5B8MWW4_9CHLO2.690e-6472.85V-type proton ATPase proteolipid subunit n=1 Tax=C... [more]
A4S062_OSTLU3.230e-6372.08V-type proton ATPase proteolipid subunit n=2 Tax=O... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000245V-ATPase proteolipid subunitPRINTSPR00122VACATPASEcoord: 52..76
score: 65.16
coord: 101..127
score: 78.56
coord: 128..151
score: 79.5
coord: 26..50
score: 76.0
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 14..72
e-value: 2.7E-13
score: 50.0
coord: 90..149
e-value: 2.9E-21
score: 75.5
IPR035921F/V-ATP synthase subunit C superfamilyGENE3D1.20.120.610coord: 7..156
e-value: 3.3E-58
score: 197.6
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 81..151
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 11..73
IPR011555V-ATPase proteolipid subunit C, eukaryoticTIGRFAMTIGR01100TIGR01100coord: 9..115
e-value: 8.5E-46
score: 152.6
NoneNo IPR availablePANTHERPTHR10263:SF61V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 4..153
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 4..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 151..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..150
NoneNo IPR availableCDDcd18176ATP-synt_Vo_c_ATP6C_rpt2coord: 83..150
e-value: 1.76576E-28
score: 98.3465
NoneNo IPR availableCDDcd18175ATP-synt_Vo_c_ATP6C_rpt1coord: 9..76
e-value: 6.14741E-29
score: 99.5317
NoneNo IPR availableTMHMMTMhelixcoord: 10..31
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3872581..3873057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12217.t1Gvermi12217.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3872581..3873057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12217.t1 ID=Gvermi12217.t1|Name=Gvermi12217.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=159bp
MPCDPAASFFGFAGAASALIFSNLGAAYGTAKAGVGVASMGVMRPELVMR
CIIPVVMAGVLGIYGLIVAVILVGQIAETNYPFFVGFAHLASGLANGLSG
LAAGICIGIVGDAGVRATAQQPKLFVVMILILIFAEALALYGLIVALILA
GKSSVTTC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000245ATPase_proteolipid_csu
IPR002379ATPase_proteolipid_c-like_dom
IPR035921F/V-ATP_Csub_sf
IPR011555ATPase_proteolipid_su_C_euk