Gvermi12268.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12268.t1
Unique NameGvermi12268.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length499
Homology
BLAST of Gvermi12268.t1 vs. uniprot
Match: A0A2V3J069_9FLOR (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J069_9FLOR)

HSP 1 Score: 171 bits (432), Expect = 1.780e-42
Identity = 109/294 (37.07%), Postives = 143/294 (48.64%), Query Frame = 0
Query:    1 MDLEHAVPTTFEYISQQHHESVLIKGSWDNWQSFAALQRNESNPNLWQVCLTLSPETVLFKFVVDNEWLAAPNYPQISDGFGGLNNSL--------EIKP-----PKSDA---------THERDAQENDDQAHAPHSVPS---------AHASVHHI------TDLQIDHGNPEEKTTNPTKDMNFDSREGSSTQHARAINRDESVYPTTKVTLSYPYSKQVK--SVSVKGSWDGWEKYSHMKQGEESENLHTILDLPAGKFIFKFIVDGKWTHSTEHEVISDGFGGHNNVLTV 255
            M+L  AVP T EY +   H SV IKGSWDNW S   LQRN+     W V + L+P   LFKF+VD+ W  APNY + SD FGG NN L        E +P     P+S+A           E + ++N   A  P  + S          H+S+         ++LQ  H     +    T    F         H    +   +  P   V +S+ Y    +   VSVKGSWD W+K   +   E     H+   LP G F+FKF+VDGKWTHST++EV SDGFGG+NNV+ V
Sbjct:    1 MNLNTAVPVTIEYFANDEHRSVAIKGSWDNWHSLTPLQRNQHESTSWHVDINLNPGVFLFKFIVDDHWQYAPNYKRQSDNFGGYNNVLHVLEEPQHETQPTHDNLPQSEAHLQATLGSGKAEPENRDNHKGALTPSHLQSHIAREQSKQLHSSLQQYPSDSDNSELQTPHNTAFSEQEEQTHSAEFVDALSQQVSHMLNASSKNACDPKRAV-VSFVYHVDARHADVSVKGSWDQWQKQLPLVPSEHGY-WHSNTALPPGSFLFKFVVDGKWTHSTQYEVQSDGFGGYNNVINV 292          
BLAST of Gvermi12268.t1 vs. uniprot
Match: A0A0K6GPP4_9BACI (Glycosidase n=16 Tax=Anoxybacillus TaxID=150247 RepID=A0A0K6GPP4_9BACI)

HSP 1 Score: 63.2 bits (152), Expect = 1.010e-6
Identity = 31/87 (35.63%), Postives = 48/87 (55.17%), Query Frame = 0
Query:   10 TFEYISQQHHESVLIKGSWDNWQSFA--ALQRNESNPNLWQVCLTLSPETVLFKFVVDNEWLAAP-NYPQISDGFGGLNNSLEIKPP 93
            TF Y+     +SVL+ GS+++WQ+     +   + N  +W V  TL   T ++KFVVD  W+  P N  Q  DG+GG N+ + +  P
Sbjct:   45 TFRYVGTGEEQSVLLAGSFNDWQTDGDKKIALTKENDRVWSVTKTLPNGTYMYKFVVDGRWITDPLNANQADDGYGGKNSVVVVGQP 131          
BLAST of Gvermi12268.t1 vs. uniprot
Match: M8D1M9_9BACI (Alpha-amylase n=1 Tax=Anoxybacillus flavithermus AK1 TaxID=1297581 RepID=M8D1M9_9BACI)

HSP 1 Score: 62.0 bits (149), Expect = 1.630e-6
Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   10 TFEYISQQHHESVLIKGSWDNWQSFAA--LQRNESNPNLWQVCLTLSPETVLFKFVVDNEWLAAP-NYPQISDGFGGLNNSLEIKPP 93
            TF Y+     +SVL+ GS+++WQ+     ++  + + ++W V  TL   T ++KFVVD  W+  P N  +  DG+GG N+ + +  P
Sbjct:   45 TFRYVGTGEEQSVLLAGSFNDWQTDGEKKIELTKESDHIWSVTKTLPDGTYMYKFVVDGNWMTDPLNNNKADDGYGGKNSVVVVGQP 131          
BLAST of Gvermi12268.t1 vs. uniprot
Match: A0A1I0TFH8_9BACI (Glycosidase (Fragment) n=1 Tax=Anoxybacillus pushchinoensis TaxID=150248 RepID=A0A1I0TFH8_9BACI)

HSP 1 Score: 62.0 bits (149), Expect = 2.230e-6
Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   10 TFEYISQQHHESVLIKGSWDNWQSFAA--LQRNESNPNLWQVCLTLSPETVLFKFVVDNEWLAAP-NYPQISDGFGGLNNSLEIKPP 93
            TF Y+     +SVL+ GS+++WQ+     ++  + + ++W V  TL   T ++KFVVD  W+  P N  +  DG+GG N+ + +  P
Sbjct:   46 TFRYVGTGEEQSVLLVGSFNDWQTDGEKKIELTKESDHIWSVTKTLPDGTYMYKFVVDRNWMTDPLNNNEADDGYGGKNSVVVVGQP 132          
BLAST of Gvermi12268.t1 vs. uniprot
Match: Q9EZZ4_GEOSE (Amylopullulanase n=4 Tax=Bacillaceae TaxID=186817 RepID=Q9EZZ4_GEOSE)

HSP 1 Score: 62.0 bits (149), Expect = 2.320e-6
Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   10 TFEYISQQHHESVLIKGSWDNWQSFAA--LQRNESNPNLWQVCLTLSPETVLFKFVVDNEWLAAP-NYPQISDGFGGLNNSLEIKPP 93
            TF Y+     +SVL+ GS+++WQ+     ++  + + ++W V  TL   T ++KFVVD  W+  P N  +  DG+GG N+ + +  P
Sbjct:   46 TFRYVGTGEEQSVLLAGSFNDWQTDGEKKIELTKESDHIWSVTKTLPDGTYMYKFVVDGNWMTDPLNNNKADDGYGGKNSVVVVGQP 132          
BLAST of Gvermi12268.t1 vs. uniprot
Match: B7GKY4_ANOFW (Alpha-amylase/pullulanase n=4 Tax=Anoxybacillus TaxID=150247 RepID=B7GKY4_ANOFW)

HSP 1 Score: 60.8 bits (146), Expect = 5.290e-6
Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   10 TFEYISQQHHESVLIKGSWDNWQSFA--ALQRNESNPNLWQVCLTLSPETVLFKFVVDNEWLAAP-NYPQISDGFGGLNNSLEIKPP 93
            TF Y+     +SVL+ GS+++WQ+     ++  + + ++W V  TL   T ++KFVVD  W   P N  Q  DG+GG N+ + +  P
Sbjct:   45 TFRYVGTGEEQSVLLAGSFNDWQTSGDKKIELTKESDHIWSVTKTLPNGTYMYKFVVDGAWKPDPLNKNQEDDGYGGKNSVVTVGSP 131          
BLAST of Gvermi12268.t1 vs. uniprot
Match: A8BQL1_GIAIC (5'-AMP-activated protein kinase, beta-1 subunit n=6 Tax=Giardia intestinalis TaxID=5741 RepID=A8BQL1_GIAIC)

HSP 1 Score: 58.2 bits (139), Expect = 7.140e-6
Identity = 29/70 (41.43%), Postives = 38/70 (54.29%), Query Frame = 0
Query:   21 SVLIKGSWDNWQSFAALQRNESNPNLWQVCLTLSPETVLFKFVVDNEWLAAPNYPQISDGFGGLNNSLEI 90
            +V   GS++NW     LQRN S    W   L L P    +KF+VD  W+ AP+ PQ  D  G LNN ++I
Sbjct:   34 AVYCIGSFNNWTERLPLQRNHSGT--WFAVLYLPPGIYQYKFIVDGNWVCAPDQPQCRDNDGNLNNVIQI 101          
BLAST of Gvermi12268.t1 vs. uniprot
Match: A0A6M2DIR3_9NEOP (AMPKBI domain-containing protein n=2 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DIR3_9NEOP)

HSP 1 Score: 58.2 bits (139), Expect = 9.110e-6
Identity = 39/133 (29.32%), Postives = 61/133 (45.86%), Query Frame = 0
Query:  129 LQIDHGNPEEKTTNPTKDMNFDS--REGSSTQHARAINRDESVYPTTKVTLSYPYSKQVKSVSVKGSWDGWEKYSHMKQGEESENLHTILDLPAGKFIFKFIVDGKWTHSTEHEVISDGFGGHNNVLTVSAPD 259
            L     N EE+T     D+ F    R  S+T      N D S  PT      + +    + V + G++  W+    +K   +     TI+DLP G+  +KF VDG+W +  E  +I +G G  NN+++V   D
Sbjct:   40 LSYQGSNEEEETDFAKPDVEFVDAPRPRSNTLSEGTKNEDHSKLPTV-----FKWGGGGRQVYISGTFTEWKALPMVKSHGD---FVTIIDLPEGEHQYKFYVDGEWKNDPETNLIDNGMGSKNNLISVKRSD 164          
The following BLAST results are available for this feature:
BLAST of Gvermi12268.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J069_9FLOR1.780e-4237.07SNF1-related protein kinase regulatory subunit bet... [more]
A0A0K6GPP4_9BACI1.010e-635.63Glycosidase n=16 Tax=Anoxybacillus TaxID=150247 Re... [more]
M8D1M9_9BACI1.630e-633.33Alpha-amylase n=1 Tax=Anoxybacillus flavithermus A... [more]
A0A1I0TFH8_9BACI2.230e-633.33Glycosidase (Fragment) n=1 Tax=Anoxybacillus pushc... [more]
Q9EZZ4_GEOSE2.320e-633.33Amylopullulanase n=4 Tax=Bacillaceae TaxID=186817 ... [more]
B7GKY4_ANOFW5.290e-634.48Alpha-amylase/pullulanase n=4 Tax=Anoxybacillus Ta... [more]
A8BQL1_GIAIC7.140e-641.435'-AMP-activated protein kinase, beta-1 subunit n=... [more]
A0A6M2DIR3_9NEOP9.110e-629.32AMPKBI domain-containing protein n=2 Tax=Pulicidae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 165..262
e-value: 7.7E-20
score: 72.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 5..91
e-value: 4.3E-19
score: 70.3
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 7..93
e-value: 2.2E-16
score: 59.8
coord: 181..260
e-value: 4.9E-19
score: 68.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..486
NoneNo IPR availablePANTHERPTHR103435'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNITcoord: 161..429
coord: 6..147
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 174..255
e-value: 2.54331E-23
score: 91.5064
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 8..90
e-value: 2.76241E-20
score: 83.032
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 173..255
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 6..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4060971..4062562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12268.t1Gvermi12268.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4060971..4062562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12268.t1 ID=Gvermi12268.t1|Name=Gvermi12268.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=499bp
MDLEHAVPTTFEYISQQHHESVLIKGSWDNWQSFAALQRNESNPNLWQVC
LTLSPETVLFKFVVDNEWLAAPNYPQISDGFGGLNNSLEIKPPKSDATHE
RDAQENDDQAHAPHSVPSAHASVHHITDLQIDHGNPEEKTTNPTKDMNFD
SREGSSTQHARAINRDESVYPTTKVTLSYPYSKQVKSVSVKGSWDGWEKY
SHMKQGEESENLHTILDLPAGKFIFKFIVDGKWTHSTEHEVISDGFGGHN
NVLTVSAPDVTTIATSEFSDTINSALPPHKSTVHEMKANPQQISVSSSET
EEAPKDNHPIEKLASCEDQDFSGKVTPPQGDESRGEQTNVVEQPCEVQTE
PEEDLCVDHYPMSGSAENLKQTSVSPNSLEMIDCQEETTDTVLNHVSKDS
SPKTRSPNDTPVTPNSEANDDQNRTPTKNEIGNTGDISDQDPDESSNEHV
DRDDEEKPKMENLSDAGENDGELTAEPETNDAEDGLLKKKSSGGCVIC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR014756Ig_E-set