Gvermi11524.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11524.t1
Unique NameGvermi11524.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length246
Homology
BLAST of Gvermi11524.t1 vs. uniprot
Match: A0A2V3IJW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW6_9FLOR)

HSP 1 Score: 355 bits (910), Expect = 1.190e-121
Identity = 153/227 (67.40%), Postives = 177/227 (77.97%), Query Frame = 0
Query:   19 AKSGINPCHGTKSVYGQGVSCEKVEFPVGMCSACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNGANRRGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNMLLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            A+SGINPCH  K+  G GV+C+KV FP G+C ACKLKPFN  NG F DC +I++L D  CQ +LR YAR  +HCDPVR RQ  DF+N +N R LDYFVYSVCEECCDCVPIG++  ++ WRA  N LL S+RGNCPAHA++D+C VLP IRFSK   GQDHWDWP ICPL+TKW FS  S+NWL KSYV MDWRINRFL+WFFWDN CG   TWKNCV +E AQKRV
Sbjct:   19 ARSGINPCHDNKAKQGAGVTCQKVVFPEGLCRACKLKPFNPNNGQFYDCTSIYNLTDPQCQQELRLYARWQAHCDPVRLRQTADFSNPSNVRALDYFVYSVCEECCDCVPIGSKTAEYGWRAPTNNLLASKRGNCPAHAYFDICKVLPKIRFSKNINGQDHWDWPMICPLLTKWLFSKNSQNWLKKSYVYMDWRINRFLVWFFWDNRCGNEVTWKNCVNLESAQKRV 245          
BLAST of Gvermi11524.t1 vs. uniprot
Match: A0A2V3IQT2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQT2_9FLOR)

HSP 1 Score: 266 bits (681), Expect = 8.020e-87
Identity = 130/247 (52.63%), Postives = 158/247 (63.97%), Query Frame = 0
Query:    1 MRFVPAALLAAALCACALAKSGINPCHGTKSVYGQGVSCEKVEFPVGMCSACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNGANRRGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNMLLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQD--HWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            M+ +  AL+  ++   A AKSG+NPCHG K  YG GV+C  V  P  MC+ CKLKP +  +G F DCA+I+DLDD  C+ +LR YA+ N HCDP R  QVQD    +NR  LDYFVYSVCEECCDC+P GA   Q+  R +   L N+ RGNCPAHA YD+C V PNI+++   G +D  H DWPKIC  I KW FS   RNWL KS VNMDWRI RFL  F+ D  C     W  C  +E  Q R+
Sbjct:    1 MKVLTTALVLLSVVYLATAKSGVNPCHGDKDKYGVGVTCTGVRIPGEMCNQCKLKP-HLPDGQFADCASIYDLDDPACRDQLRIYAQENKHCDPQRVAQVQDMGKYSNRLALDYFVYSVCEECCDCIPRGASANQYQQRLEQGTLGNAYRGNCPAHAHYDICRVFPNIKYTMKAGVEDDTHEDWPKICWHIGKWIFSRDGRNWLYKSNVNMDWRIARFLENFWDDVGCWRQTIWTECTGLEGDQGRL 246          
BLAST of Gvermi11524.t1 vs. uniprot
Match: R7QF16_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF16_CHOCR)

HSP 1 Score: 217 bits (553), Expect = 2.000e-67
Identity = 110/248 (44.35%), Postives = 149/248 (60.08%), Query Frame = 0
Query:    1 MRFVPAALLA-AALCACALAKSGINPCHGTKSVYGQGVSCEKVEFPVGMCSACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNGANRRGLDYFVYSVCEECCDCVPIGARPEQHYWR--AKNNMLLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            M  VP ALL  AA+ + A +KSG NPCH  + V   GV CE +  P GMC  C+L  +++  G F DC AI+ + +  C++++ +Y+ LN  CD VR +Q++DF++  NR+ LDYFVYSVCEECCDC+P GAR  Q+  R  A+   L +  RGNCPAHA YD+C V P IR    PGG      PK CP I +W FSPAS+ W  +   ++   +  FL  F     C    TW+ C  +E AQ+R+
Sbjct:    1 MNSVPLALLTLAAVLSLASSKSGKNPCHPNRRVESLGVPCEGIYLPPGMCDNCELSAYDS-RGNFNDCQAIYKIGEPACRSQIERYSELNP-CDTVRKKQLEDFDDPDNRKALDYFVYSVCEECCDCIPRGARSSQYEERKRARPRTLTSLVRGNCPAHAHYDICRVWPEIRHVTRPGGTLRLGRPKACPKIREWFFSPASKGWAGQDNTDISRDVRNFLGNFNSVARCRRKSTWQRCTDLEVAQRRI 246          
BLAST of Gvermi11524.t1 vs. uniprot
Match: A0A2V3IMM0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM0_9FLOR)

HSP 1 Score: 199 bits (507), Expect = 6.820e-61
Identity = 95/213 (44.60%), Postives = 126/213 (59.15%), Query Frame = 0
Query:   34 GQGVSCEKVEFPVGMCSACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDF-NNGANRRGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNMLLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            G  V+C  V  P  +CSACKLKP     G F+DC +IFDL+   C+A+L++Y RLN HCDPVRA QV    ++G  R+GLDYF+YS+CE+CCDC+P G    Q+ +R     L N+ RGNCPAHA YDVC V P IR   + G       P +CP +  W  +P + NWL ++ V     +  FL  F     C     W++CV +E  QKR+
Sbjct:    4 GFNVTCGVVALPPRLCSACKLKPI-LPGGHFEDCTSIFDLESQSCRAELKEYVRLNKHCDPVRAEQVPKMMSSGGARQGLDYFIYSICEQCCDCIPRGTHISQYGFRESIGKLFNAGRGNCPAHAVYDVCKVWPKIRGVVSAGESRKVSAPMVCPHLKTWLRNPDNANWLHRNQVKYHPAVGNFLNSFIDAAGCSARPFWESCVRLETKQKRL 215          
BLAST of Gvermi11524.t1 vs. uniprot
Match: A0A2V3ID26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID26_9FLOR)

HSP 1 Score: 178 bits (451), Expect = 2.900e-52
Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 0
Query:   25 PCHGTKSVYGQGVSCEKVEFPVGMCSACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNGANRRGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNMLLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            PCH  K        C +V  P  +CS C L+     NG FKDC +I++LD   C+AKL++Y  +N  CD  RA QV+ +N   ++  LDYFVYSVCE+CCDC+  GA P Q   R   N L + +RGNCPAHA YD+C VLPNIR+    G      W   C  +  W  S AS+N+ T     M   I +FL      N CG    W  CV ME  Q  +
Sbjct:   13 PCHMDKQSLNS--MCRQVRLPRELCSKCTLRLVKE-NGGFKDCKSIYNLDAPGCKAKLQRYVDINP-CDGKRASQVKAWNP-TSKMQLDYFVYSVCEQCCDCIYKGATPGQFQRRKNENRLFHPERGNCPAHAVYDICKVLPNIRYMALGGAPFKEGWENTCKDLRMWLRSEASKNFSTNHNAKMSGNIKKFLRSVNVANQCGSETVWTRCVRMERKQMHI 228          
BLAST of Gvermi11524.t1 vs. uniprot
Match: R7QE68_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE68_CHOCR)

HSP 1 Score: 159 bits (401), Expect = 2.390e-45
Identity = 77/180 (42.78%), Postives = 101/180 (56.11%), Query Frame = 0
Query:   70 IFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNGANRRGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNMLLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWD----WPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            I+D  +  C+  LR+YA LN  CD  R R V+DF+N  N   LDYF+YSVCE+CCDC+P G +P +   R     L+   R NCPAHA YDVC V PNIR  ++P  +   D    WPKICP+I KW  SP  +N   K  +N    + +FL  +     C     W  C A+E +Q R+
Sbjct:    3 IYDTSNPQCRQALRRYASLNP-CDVQRNRHVRDFSNSQNLIALDYFIYSVCEQCCDCIPRGTKPGEFAKRKAAGTLIKVDRANCPAHARYDVCKVWPNIRHLRSPWERLPRDLNTLWPKICPIIFKWADSPDGQNLYNKDQINQPASMTQFLTRYVKVAFCSKKAFWNECTALEKSQLRI 181          
BLAST of Gvermi11524.t1 vs. uniprot
Match: A0A2V3IEV2_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV2_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 2.770e-42
Identity = 89/231 (38.53%), Postives = 113/231 (48.92%), Query Frame = 0
Query:   22 GINPCHGTKSVYGQGVSCEKVEFPVGMCSACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNG--ANRRGLDYFVYSVCEECCDCVPIGARPEQH-----YWRAKNNMLLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            G  PCH TKS     V+C  V  P   CS C LKP  + NG F  C  IF L+   CQ  L +Y  LN +CDPVR + +  +  G  +    LDYF+YSVCE CCDCVP+G     +         +N  L  + RGNCPAHA YD+C VLP+++    PG  D    P  CP +  W  S  S NW T    ++D  +  FL        C     W+ C  ME  Q  +
Sbjct:  159 GFFPCHPTKSRKQTEVTCSTVRIPPAFCSRCALKPVTS-NGQFARCDDIFQLETPSCQLALEEYVDLNRNCDPVREQALNAWKAGDASAATQLDYFMYSVCELCCDCVPMGITAADYPALKAAHSEQNPTLWAADRGNCPAHAQYDLCNVLPSVQAFVKPGEPDKV-MPPACPPLNAWLNSARSTNWQTNPDASIDGSVRIFLNDALQALECEREDVWRTCFHMEDLQNHI 387          
BLAST of Gvermi11524.t1 vs. uniprot
Match: A0A2V3IVT7_9FLOR (Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT7_9FLOR)

HSP 1 Score: 152 bits (384), Expect = 1.880e-39
Identity = 87/250 (34.80%), Postives = 119/250 (47.60%), Query Frame = 0
Query:    7 ALLAAALCAC---ALAKSGINPCHGTKSVYGQGVSCEKVEFPVGMCSACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNGAN---RRGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNM-----LLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            A++ A LC     AL      PCH TK+     V C  V+ P  +C  C L+P    +G F  C  I+D     C + +R Y   N  CD  R   +       +   R  +DYF+YSVCE+CCDCVP+G +       +K +      L ++ RGNCPAHA YDVC VLP+I        +       ICP + KW  +PA+ +W T   V +   I +FL       HCG +Q W +C  ME  Q  +
Sbjct:    5 AVVVAVLCVSLFHALHAKSFFPCHSTKASVHNDVKCTSVKLPPRLCGLCPLRP-TLQDGSFDVCDRIYDTTSPACMSAMRTYVNDNE-CDARRREALDRLEKNGDEDARSEIDYFLYSVCEQCCDCVPMGVKQGDFAQLSKAHSASSPTLWSATRGNCPAHARYDVCKVLPSIATFTADKSKTK----PICPSLNKWINTPAAEDWQTNPEVTLAADIEQFLNGMLVATHCGDAQIWNSCQQMEFKQHHL 248          
BLAST of Gvermi11524.t1 vs. uniprot
Match: R7QFW8_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR)

HSP 1 Score: 117 bits (294), Expect = 4.930e-27
Identity = 56/139 (40.29%), Postives = 74/139 (53.24%), Query Frame = 0
Query:  112 LDYFVYSVCEECCDCVPIGARPEQHYWRAKNNM-----LLNSQRGNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV 245
            LDYF+YSVCE+CCDC+P+G R   +   A  +      L    RGNCPAHA +DVC VLPN+R+   PG  +    PKICP + +WQ SP + +W      N++  + RFL        C     W  C  ME  Q  +
Sbjct:    3 LDYFLYSVCEQCCDCIPMGTRRRDYDALASAHSPADPTLWKEDRGNCPAHAQFDVCKVLPNVRYFAKPGDPELVA-PKICPKLREWQKSPEAADWPVNPETNIESDVRRFLNGILVATDCDNKLIWGRCYEMEDKQSNL 140          
BLAST of Gvermi11524.t1 vs. uniprot
Match: A0A7S3ZCA3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCA3_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 1.070e-21
Identity = 64/199 (32.16%), Postives = 97/199 (48.74%), Query Frame = 0
Query:   62 GFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQVQDFNNGANR-------RGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNMLLNSQRGNCPAHAFYDVCAVLPNIRF---SKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNM----DWRINRFLIWFFWDN-HCGFSQTWKNCVAMEHAQKRV 245
            G FKDCAA+FD+    C A+L++Y   N  CD  R   +    NG N         GLD+FVY++CE CCDC+P G   +       ++   N  RGNC AH  +D C++ PN+ +   +K P          +CP +  ++  P  RN+L + Y +      +RI    +   W+  HC     ++ C  +E AQ R+
Sbjct:   48 GEFKDCAAMFDVATDGCLAELQKYVDDNV-CDDKRRDFLSIVKNGPNHPNYATAVEGLDFFVYAMCEACCDCIPFGGHRD-------DSSQYNIHRGNCYAHPRFDTCSLFPNLTWIGPNKPPNAAP------VCPALEDFEAGPG-RNFLLQEYQHEFEEPRYRIIPPFLESMWNGLHCSAVGAYQQCFDLECAQNRI 231          
The following BLAST results are available for this feature:
BLAST of Gvermi11524.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IJW6_9FLOR1.190e-12167.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQT2_9FLOR8.020e-8752.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QF16_CHOCR2.000e-6744.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IMM0_9FLOR6.820e-6144.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID26_9FLOR2.900e-5242.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QE68_CHOCR2.390e-4542.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IEV2_9FLOR2.770e-4238.53Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IVT7_9FLOR1.880e-3934.80Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7QFW8_CHOCR4.930e-2740.29HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3ZCA3_9EUKA1.070e-2132.16Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:726603..727340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11524.t1Gvermi11524.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 726603..727340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11524.t1 ID=Gvermi11524.t1|Name=Gvermi11524.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=246bp
MRFVPAALLAAALCACALAKSGINPCHGTKSVYGQGVSCEKVEFPVGMCS
ACKLKPFNAANGFFKDCAAIFDLDDAVCQAKLRQYARLNSHCDPVRARQV
QDFNNGANRRGLDYFVYSVCEECCDCVPIGARPEQHYWRAKNNMLLNSQR
GNCPAHAFYDVCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRN
WLTKSYVNMDWRINRFLIWFFWDNHCGFSQTWKNCVAMEHAQKRV*
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