Gvermi11539.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11539.t1
Unique NameGvermi11539.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length416
Homology
BLAST of Gvermi11539.t1 vs. uniprot
Match: A0A2V3IMZ5_9FLOR (Endoplasmic reticulum-Golgi intermediate compartment protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMZ5_9FLOR)

HSP 1 Score: 669 bits (1725), Expect = 6.560e-240
Identity = 330/416 (79.33%), Postives = 365/416 (87.74%), Query Frame = 0
Query:    1 MTLPHRAAAPEHGGLASGYARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQP-RTKLHVSSRVSTNSTSSAAARNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGKLL 415
            MTLP RA +PE  G+   YAR MRSLDAFSRMMKVPEDLRTQSTVGGTIS+ISF VIS+LFLTEL S+LTP+R+TTLSVDAGVGE L IY+DVDFPHVNCE+MGVDALDIGGTVQLEITNHM+K AIDH+GR+V+   R+KL    RV   S          PSP PN CGSCMGAG+TG ECCNTC +VRKMYEKRGWLLTDL+ IP CVREG+ T+TPG +D R+GCNIHGHI+ISKVAGRINLTPGHSF+FHGHTLHDLSAVR+H LDLSHRINKLWFG+PYPGQVNPLDG+SKHA    DAMGAHEYFIRVVPTTYK P+S+TLRTNQYSQSYFFR+SDP +GGQLMPGVFLNYDLSPIHVEV ESR SFLHFLVQLCAIIGGVFTVASMLSTFMDDVVL+A+RKR++GKL+
Sbjct:   26 MTLPQRATSPERAGVPP-YARFMRSLDAFSRMMKVPEDLRTQSTVGGTISLISFVVISVLFLTELASYLTPQRSTTLSVDAGVGETLTIYIDVDFPHVNCELMGVDALDIGGTVQLEITNHMFKTAIDHDGRRVQGSLRSKLGEPPRVMPPS----------PSPWPNGCGSCMGAGITGKECCNTCTDVRKMYEKRGWLLTDLSGIPHCVREGITTLTPGQYDARFGCNIHGHIQISKVAGRINLTPGHSFEFHGHTLHDLSAVRDHTLDLSHRINKLWFGDPYPGQVNPLDGVSKHAKSASDAMGAHEYFIRVVPTTYKWPFSKTLRTNQYSQSYFFRKSDPSKGGQLMPGVFLNYDLSPIHVEVSESRGSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLKAMRKRRMGKLM 430          
BLAST of Gvermi11539.t1 vs. uniprot
Match: R7Q3J9_CHOCR (Endoplasmic reticulum-Golgi intermediate compartment protein 3, ERV46, ERGIC3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3J9_CHOCR)

HSP 1 Score: 564 bits (1454), Expect = 2.830e-199
Identity = 279/398 (70.10%), Postives = 324/398 (81.41%), Query Frame = 0
Query:   21 RLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQP-RTKLHVSSRVSTNSTSSAAARNTPPSPRP--NECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGKLL 415
            R +RS D FSRMMKVPEDLRTQS+ GG +S+IS  VIS LFL+EL S+LTP+RTT+LSVDAG  E LRI+LDVDFP VNCEIMGVDALD+GGT QLEITNHM+K  IDH+GR +    RT+L           +  +A N  PSP P  N CGSCMGA L  ++CCNTCAEV+  YEKRGWLL DL ++PQCVREG+ TIT G +D   GCN+HG IEISKVAGRI++TPGHSF+FHG TLHDLSA+R+H+LDLSH+I KL FG+PYPGQ NPLDG  KHAT  +D +G HEYFIR+VPTTYK  +S  LRTNQYSQSYFFRRSDP +GGQL+PG+FL+YDLSPIHVEV ESR+SF HF+VQLCAIIGGVFTV+SMLSTFMDDVVLRA+RK Q GKL+
Sbjct:    2 RELRSFDCFSRMMKVPEDLRTQSSTGGLVSMISLLVISCLFLSELLSYLTPERTTSLSVDAGRDELLRIHLDVDFPFVNCEIMGVDALDVGGTAQLEITNHMFKTPIDHKGRPISSADRTRL-------ARHAAKQSAPNAVPSPSPWKNGCGSCMGAQLAADQCCNTCAEVKAAYEKRGWLLVDLKHVPQCVREGITTITAGEYDPERGCNVHGFIEISKVAGRIHVTPGHSFEFHGRTLHDLSALRDHQLDLSHKIRKLSFGDPYPGQTNPLDGAEKHATTEDDKLGQHEYFIRIVPTTYKYLFSSPLRTNQYSQSYFFRRSDPNKGGQLIPGLFLSYDLSPIHVEVAESRKSFFHFVVQLCAIIGGVFTVSSMLSTFMDDVVLRAMRKSQTGKLM 392          
BLAST of Gvermi11539.t1 vs. uniprot
Match: A0A1X6P245_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P245_PORUM)

HSP 1 Score: 384 bits (986), Expect = 3.180e-128
Identity = 197/398 (49.50%), Postives = 265/398 (66.58%), Query Frame = 0
Query:   19 YARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQPRTKLHVSSRVSTNSTSSAAARNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITP-GAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLST--FMDDVVLRAVRKRQVGK 413
            + R +RS DAF + +   ED R ++  GG +S+ +  VI++L L+E  SFLTP+RT+T+++D G  E L+I+L VDFP +NC+++G+D+LD  G +QLEITNH+YK  +D +G  +   +       R+  N    A   + P    P  CGSC GA      CCN C +V++ YEKRGWLLTDL  + QC REGVK++ P G FD   GCN+HG+IE+ K++G+ +LTPGHS  FHGH LHD+S  RN +LDLSH I  L FG  +PGQ NPLDG  K +     +MG HEYF ++VPTTYK    R+L+TNQYS + FFR SDP + GQL+PGVF+ Y+LSPI VE E+ R SF HF+VQL AI+GGV+ +A M+ +  F    VLR   KR +GK
Sbjct:    7 FGRRVRSADAFPKTL---EDFRVKTASGGMVSVAALTVIAILVLSETASFLTPERTSTITIDEGRNETLQIFLSVDFPRLNCDVIGIDSLDESGNMQLEITNHVYKTRLDQQGHVIHGEKK------RIERNPVRQAVPAHKPVELPPGYCGSCYGAA-PDTTCCNKCDDVKQAYEKRGWLLTDLEGVEQCAREGVKSLPPEGDFDPTEGCNVHGYIEVLKLSGKFHLTPGHSINFHGHNLHDMSVFRNRQLDLSHHIRSLSFGASFPGQKNPLDGTVK-SLPASQSMGQHEYFTKIVPTTYKKARGRSLKTNQYSVTEFFRPSDPNKDGQLLPGVFVFYELSPIRVEYEDKRGSFPHFIVQLSAIVGGVWALAGMVDSGIFHGARVLR--EKRGLGK 391          
BLAST of Gvermi11539.t1 vs. uniprot
Match: A0A5J4YNB5_PORPP (Endoplasmic reticulum-Golgi intermediate compartment protein 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNB5_PORPP)

HSP 1 Score: 365 bits (936), Expect = 1.560e-120
Identity = 192/410 (46.83%), Postives = 272/410 (66.34%), Query Frame = 0
Query:   14 GLASGYARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEG--RKVEQPRTKLHVSSRVSTNSTSSAAA------RNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGKLL 415
            G+     + ++ +DAF + M   +D + Q+  GG +S++S  VI +L ++EL +FLTP+R   LSVD   GEKLR+Y+D+DFP VNCE++G+DALD  G VQLEI+N++ K  +   G  R       K+ V+     N+ +SA +      R  PP P+ + CG+C GAG  G +CCNTC +V   Y ++GW +TDL+   QCVR G  T          GC I G+IE++KVAG  +++PGH+F F+G  LHD+SA     +DLSH IN L FGE +PG  NPLDG+SK     +D +G +EYF++VVPTT++  +S  ++TNQ+S + FFR SDP +GGQL+PGVF+ YDLSPI V+VEE RRSF HF+VQLCAI+GGV+TV+ ML + +  +  + ++KR VGKL+
Sbjct:    3 GIVGDMRKRVQMMDAFPKTM---DDFKVQTASGGVVSLVSLSVIVVLVISELLTFLTPERRVELSVDVSRGEKLRVYVDIDFPRVNCEVLGIDALDATGNVQLEISNNLRKHKLLDRGVIRSDGMATRKVAVADPADPNAFTSADSGAGQQQRGAPPLPQ-DYCGTCYGAGKDG-QCCNTCDDVVNQYREKGWSITDLSVFEQCVRGGNHTNLAVKLRPGEGCRIEGYIEVAKVAGNFHISPGHTFSFNGRHLHDMSAFLQRGIDLSHTINHLSFGESFPGAKNPLDGVSKQ----QDELGMYEYFVKVVPTTFQGRFSSLIKTNQFSVTEFFRPSDPAKGGQLLPGVFIFYDLSPITVQVEERRRSFFHFIVQLCAIVGGVYTVSGMLDSSLYHLP-KMMKKRNVGKLI 402          
BLAST of Gvermi11539.t1 vs. uniprot
Match: A0A7S1EQP9_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQP9_9RHOD)

HSP 1 Score: 335 bits (858), Expect = 5.930e-109
Identity = 173/403 (42.93%), Postives = 257/403 (63.77%), Query Frame = 0
Query:   16 ASGYARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQPRTKLHVSSRVSTNSTSSAAARNTPP---SPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPY-SRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGKL 414
            ++G +R+MR + A     K  ED R ++  GG +S++S  VI +LF++E  +FL+P+R   L VD   GE L++Y+D+DFP +NCE++G+DALD  G +QLEITN + K  +D  G+ V  P  K+              A R  P    S  P+ CGSC GA    + CCNTC++V+  Y  RGW+LT L +I QCV+EG        +    GC I G I++SKV G  +++PGH+F+ HG  +HD+SA R  +LDLSH I+ L FG+ YPGQ+NPLDG+ K A    + +G +EYF++VVPT++K  + S  +++NQYS + FFR SDP +GG L+PGVF+ YD+SPI +   E ++SF HF+VQ  AIIGGV++++ ++ + +  +  R ++K+   KL
Sbjct:    3 SNGISRIMRRVRALDAFPKTMEDARIKTASGGILSLLSLTVIVILFISEFIAFLSPERHVELRVDVSRGESLKVYIDIDFPRINCELLGIDALDATGNIQLEITNGLTKTRLDKFGKVV--PTRKVF------------PAERKKPIRSLSNEPSACGSCYGAT---DGCCNTCSDVQDAYRTRGWVLTSLESIEQCVKEGKHMNITSTYRPGEGCKIDGFIQVSKVQGNFHISPGHTFESHGRQMHDMSAFRESQLDLSHTIHSLSFGDAYPGQLNPLDGVEKVAGNGPEGLGMYEYFVKVVPTSFKGRFNSHVIKSNQYSVTEFFRASDPVKGGNLLPGVFIIYDMSPILLVFTERQKSFFHFIVQFFAIIGGVYSISCIIDSGIYHLP-RMIKKKNAPKL 387          
BLAST of Gvermi11539.t1 vs. uniprot
Match: A0A7S0ZH85_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH85_9RHOD)

HSP 1 Score: 285 bits (730), Expect = 1.850e-89
Identity = 154/408 (37.75%), Postives = 246/408 (60.29%), Query Frame = 0
Query:   14 GLASGYARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQPRTKLHVSSRVSTNSTSSAAARNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTI---TPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTY-KLPYSRTLRTNQ----YSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGK 413
            G+    +R    + A+    +  ++ R ++  GG IS+IS  +IS L ++EL  +L+ +R T  SVD  V + +++Y+D+DFP ++CE++G+D ++I G +QL + NH+YK ++      V  P+ K     + +     S+     P       CGSC GA  + ++CCNTC +VRK YEKRGW+L  + +I QC+REG+ +    T    +   GCNI G +EI KVAG  ++ PG +F  +G  +HD+S V++  ++L H I+    G+ YPG+ NPLDG+SK  +  E+  G  EYF++VV T Y ++ +   ++T Q    YS + ++ +  P +  +++PGV+  YD SPI V + ++R SF HFLVQ+CAI+GGVFTVA ML + + +   R V+K Q+GK
Sbjct:    3 GMGGDRSRGYGGISAWDWYSRTVDEFREKTFFGGLISLISAVLISALIISELIGYLSIERRTEFSVDTEVQDTIKLYIDIDFPEMSCELLGIDVIEINGDMQLGVQNHLYKTSMAVSSN-VPNPKHKKEQKPKKTKPFHISSVTMKLPEK----YCGSCFGAASSESQCCNTCDDVRKAYEKRGWVLDSVDSIEQCIREGLVSFEKSTEELLNNPDGCNIRGFLEIDKVAGNFHIAPGKTFSVNGVMIHDMSQVQSSLINLKHYIHHFTVGDSYPGRQNPLDGVSKLNSN-EEPNGVFEYFLKVVSTKYCRIGWFGRVKTEQKTYQYSIAEYYHQITPNERNRVLPGVYFVYDFSPIAVTLIDTRSSFFHFLVQICAIVGGVFTVARMLDSTVYEGT-RFVKKMQIGK 403          
BLAST of Gvermi11539.t1 vs. uniprot
Match: A0A7S2ZYG2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYG2_9RHOD)

HSP 1 Score: 280 bits (715), Expect = 2.030e-87
Identity = 145/361 (40.17%), Postives = 222/361 (61.50%), Query Frame = 0
Query:   15 LASGYARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKV-EQPRTKLHVSSRVSTNSTSSAAARNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFL 374
            L     + +R+ DAF++ M   +D + ++  GG +SI+ + ++S LFL+EL  +L+ +  T L VD   GE + IYLD+ FP ++C ++G+DALD+ G VQLEI++ +YKI  D  G  +  Q + +L          TS   ++        + CGSC GA      CCN+C EV++ +E RGW+  +L  I QCVREG          E  GC + G ++++KVAG ++++PGH+F F+G  LHD SA   + L+LSHRIN+L +G+ +PGQ NPLD   K   + +D +G HEYF+++VPTTYK      + +NQYS + +FR+ +P   G ++PGV+  Y++SPI VEV E+R+ FL
Sbjct:   44 LFDSLGKRVRNFDAFAKTM---DDFKVRTKSGGVVSIVGYVIMSALFLSELKMYLSNRVETKLVVDNSRGEGMSIYLDIHFPKISCNLLGIDALDMTGDVQLEISHDLYKIRTDPSGEPIANQKKDRLEPK-------TSIRESKGKELEQDESYCGSCYGASAG---CCNSCDEVKEAFEARGWMEINLNEIEQCVREGKMADNKLVAGE--GCLVKGKVDVAKVAGNLHISPGHTFDFNGVQLHDNSAFEGNSLNLSHRINRLSYGDSFPGQKNPLDETDK-TLKDDDPLGMHEYFVKIVPTTYKKASGEAISSNQYSVTEYFRQGEPTASGTVLPGVYFFYEMSPIKVEVTETRKPFL 388          
BLAST of Gvermi11539.t1 vs. uniprot
Match: UPI001C47F812 (endoplasmic reticulum-Golgi intermediate compartment protein 3-like n=1 Tax=Homarus americanus TaxID=6706 RepID=UPI001C47F812)

HSP 1 Score: 273 bits (699), Expect = 6.110e-85
Identity = 152/403 (37.72%), Postives = 226/403 (56.08%), Query Frame = 0
Query:   13 GGLASGYARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQPRTKLHVSSRVS--TNSTSSAAARNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGK 413
            G      A  +R LDA+    K  ED + ++  G  ++I++  +++LLFL+EL+ +LTPK    L VD   G KLRI LDV FP++ C ++ +DA+D+ G   + I +++YK  +D +GR ++ P  +  +   V    N T       T  +P+   CGSC GA    ++CCNTC +V+  Y  +GW L  L NI QCV+EG    +    DE  GC I+G++E+++V G  +L PG SFQ +   +HD+   R    DLSHRI  L FG   PG+ NP+DG      + E       Y+I++VPTTY+     TL TNQ+S +   +    G G   +PGVF  Y+LSP+ V+  E  +S  HFL  +C+IIGGVFTVA ++ + +        RK ++GK
Sbjct:    2 GSTVKSVADKLRQLDAYP---KTQEDFQIKTLSGAAVAIVAGIIMALLFLSELYDYLTPKLAEDLFVDTTRGSKLRINLDVIFPNIPCNMLSLDAMDLSGEQHVNIHHNIYKRKLDLDGRPIQDPERQERIGHAVKEDVNGTQENNVVQTTAAPK---CGSCYGAESEKDQCCNTCEDVKDAYRTKGWALPPLKNINQCVKEGKLVESSELPDE--GCQIYGYLEVNRVGGNFHLAPGKSFQHNHLHIHDVQQYRTADFDLSHRIRHLSFGVNIPGKTNPIDGTE---LKTEKGPKTINYYIKIVPTTYEKVDGSTLSTNQFSVTQHQKNIQMGMGETGLPGVFFTYELSPMMVKYTEKHKSLGHFLTGVCSIIGGVFTVAGIIDSIIYHSHRALQRKIEIGK 393          
BLAST of Gvermi11539.t1 vs. uniprot
Match: UPI001CFA5E7A (endoplasmic reticulum-Golgi intermediate compartment protein 3-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFA5E7A)

HSP 1 Score: 273 bits (698), Expect = 6.590e-85
Identity = 162/409 (39.61%), Postives = 233/409 (56.97%), Query Frame = 0
Query:   18 GYARLMRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQPRTKLHVSSRVSTNSTSSAAARNTPPSPRP----------NE--CGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREG-VKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGK 413
            G    +R+LDA+    K+ ED  +++  GG I++ S  ++ LLF +EL  +L     T L VD   GE LRI  DV FP + C I+ +DA+DI G   L++ + ++K  +D+ G  +E  +  +                   P   RP          NE  CGSC GA  +  ECCN+C EVR+ Y K+GW L++   I QC REG ++ I     +E  GCNIHG +E++KVAG  +  PG SF   G  +HD+ A +    ++SH+INKL FGE +PG VNPLDG+  H T  E   G ++YFI+VVPT Y   +  T+++NQ+S +  FR ++ G+  Q +PGVF  YDLSPI V   E   SFLHFL  +CAI+GGVFTV+ ++ +F+        +K ++GK
Sbjct:    3 GIMNRLRNLDAYP---KINEDFYSRTLSGGVITLASSVIMFLLFFSELRLYLHATTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIFKKRLDNHGNVIEARQEGI-----------------GAPKIDRPLQRHGGRLEHNETYCGSCFGAETSDEECCNSCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKE---EEGEGCNIHGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHQINKLSFGEYFPGVVNPLDGV--HWTH-ETPNGMYQYFIKVVPTVYTDLHGNTIQSNQFSVTEHFRSAEIGRL-QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTSVCAIVGGVFTVSGIIDSFIYHGQKAIKKKMEIGK 384          
BLAST of Gvermi11539.t1 vs. uniprot
Match: A0A078HKQ9_BRANA ((rape) hypothetical protein n=32 Tax=Brassicaceae TaxID=3700 RepID=A0A078HKQ9_BRANA)

HSP 1 Score: 272 bits (696), Expect = 1.160e-84
Identity = 148/391 (37.85%), Postives = 225/391 (57.54%), Query Frame = 0
Query:   23 MRSLDAFSRMMKVPEDLRTQSTVGGTISIISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNCEIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQPRTKLHVSSRVSTNSTSSAAARNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLLTDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHSFQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATRVEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLMPGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDDVVLRAVRKRQVGK 413
            +R+LDA+    K+ ED   ++  GG I+++S  V+ +LF +EL  ++ P   T L VD   GEKLRI  DV FP + C I+ +D +DI G   L++ + ++K  +D  G  +E  +  +       T          T        CGSC GA  T + CCN+C EVR+ Y K+GW L+D  +I QC REG   +     +E  GCN+HG +E++KVAG  +  PG SF   G   HD+   +    ++SH++N+L FG+ +PG VNPLDG+  +  +     G ++YFI+VVPT Y   + +T+++NQ+S +  F+ ++ G+  Q  PGVF  YDLSPI V  EE    FLHFL  +CAI+GG+FTV+ ++ +F+        +K ++GK
Sbjct:    4 LRNLDAYP---KINEDFYKRTLSGGVITLVSSVVMLILFFSELRLYMHPVTETQLRVDTTRGEKLRINFDVTFPALQCSIISIDTMDISGERHLDVRHDIFKRRLDSHGNVIEAKQGGIG-----HTKIEKPLQKHGTRLEDNEKYCGSCFGAEETDDACCNSCEEVREAYRKKGWGLSDPESIDQCKREGY--VQKVKDEEGEGCNVHGFVEVNKVAGNFHFVPGQSFHQSGFQFHDMVMFQQGNYNISHKVNRLAFGDFFPGIVNPLDGVQWNQDKQN---GVYQYFIKVVPTVYTDVHGKTIQSNQFSVTEHFQNAEAGRM-QSPPGVFFYYDLSPIKVIFEEQHVEFLHFLTNVCAIVGGIFTVSGIVDSFIYHGQRAIKKKMEIGK 380          
The following BLAST results are available for this feature:
BLAST of Gvermi11539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMZ5_9FLOR6.560e-24079.33Endoplasmic reticulum-Golgi intermediate compartme... [more]
R7Q3J9_CHOCR2.830e-19970.10Endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A1X6P245_PORUM3.180e-12849.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YNB5_PORPP1.560e-12046.83Endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A7S1EQP9_9RHOD5.930e-10942.93Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S0ZH85_9RHOD1.850e-8937.75Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S2ZYG2_9RHOD2.030e-8740.17Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
UPI001C47F8126.110e-8537.72endoplasmic reticulum-Golgi intermediate compartme... [more]
UPI001CFA5E7A6.590e-8539.61endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A078HKQ9_BRANA1.160e-8437.85(rape) hypothetical protein n=32 Tax=Brassicaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039542Endoplasmic reticulum vesicle transporter, N-terminalPFAMPF13850ERGIC_Ncoord: 23..115
e-value: 1.5E-22
score: 79.6
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 172..394
e-value: 3.2E-67
score: 226.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 395..415
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 373..394
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..372
NoneNo IPR availableTMHMMTMhelixcoord: 376..398
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
IPR045888Endoplasmic reticulum vesicle transporterPANTHERPTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINcoord: 22..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:768484..769731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11539.t1Gvermi11539.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 768484..769731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11539.t1 ID=Gvermi11539.t1|Name=Gvermi11539.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=416bp
MTLPHRAAAPEHGGLASGYARLMRSLDAFSRMMKVPEDLRTQSTVGGTIS
IISFFVISLLFLTELWSFLTPKRTTTLSVDAGVGEKLRIYLDVDFPHVNC
EIMGVDALDIGGTVQLEITNHMYKIAIDHEGRKVEQPRTKLHVSSRVSTN
STSSAAARNTPPSPRPNECGSCMGAGLTGNECCNTCAEVRKMYEKRGWLL
TDLTNIPQCVREGVKTITPGAFDERYGCNIHGHIEISKVAGRINLTPGHS
FQFHGHTLHDLSAVRNHKLDLSHRINKLWFGEPYPGQVNPLDGISKHATR
VEDAMGAHEYFIRVVPTTYKLPYSRTLRTNQYSQSYFFRRSDPGQGGQLM
PGVFLNYDLSPIHVEVEESRRSFLHFLVQLCAIIGGVFTVASMLSTFMDD
VVLRAVRKRQVGKLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039542Erv_N
IPR012936Erv_C
IPR045888Erv