Gvermi12379.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12379.t1
Unique NameGvermi12379.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length766
Homology
BLAST of Gvermi12379.t1 vs. uniprot
Match: A0A2V3J4T6_9FLOR (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4T6_9FLOR)

HSP 1 Score: 814 bits (2103), Expect = 3.910e-286
Identity = 455/786 (57.89%), Postives = 545/786 (69.34%), Query Frame = 0
Query:    1 MRGFKQEHVSLPPRVLQHPEHWRLERWLVEPGCSVHREQRIAVFRSLSNAALEYAIAPRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVCGETAQSLHFADTKHTVERIPVAYEAAHLAVSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPEMISCFPPNVDVNSVRAFQLGPVTHPTASALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNRAYATY-------TVQRLHEMGHQLSPPSGN---VPAPTAVPAXXXXXXXGAKQRGASRPCGHAHGQEAHAICAVSGAAQRS-----AQTEQRDRRLADHGKADAAENENERARSAVAQNCAHTAA------GTVCGAVANGNSQADAQNERLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAVGNG-SLSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKEKGTVYTGPAKRFEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSSALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVVSPAWVEACSVNFERQDEFDYQLDRDDRFKTSDELKSWVNANFAKAGSLSRKRSVVQMYDAEAGDDSTRLKRRKLDSPC--PSVRDSGGRSPVAEGGMLSILSQDEIGAAIEAAF 762
            MRG+KQEHV LP RVLQ P  WRL+RWLV    SVHREQR+A F+SLS  A+EYA APRSGK+V TF+ Q S VD + S LALIEFC H+VVFKGICA+CGETAQSLHFA+TK  VERIPVAY++  LAVSRAEAES ASVNAR+LL SQRLSLVLDLDHTLVHATDD RAP++I+ FPP+ D++SV+AF L PV HP A  LMHVKLRPHL +FL R+S  FELHIYTMGTR YADQIA +IDP KKLFGGRITSREDF EGR NQKSIQRLFPCDDSMVLIVDDREDVWIS+TGQSFMPNL+RA+PYHFWDGLHE Y+R  AT              +    L  P+ N     AP  +           +    +        +E +     S +A        A++   + +        A   + ER       +            GT  G   NG ++  A+      NA    AD     S L  H    +      ++  DASG      N  S S LFS+LV +WW++D DPK SNHLLKLA+VL ECHSRFF +AS+ ++E G V  GPAKRF PPADVK++LASVRREVL++CV+ FTGVIPTGVDP SS  W+LA+RLGAQC L+YENGH THLV S+ RGRNTRKYKQA+ESG A+V+SPAW++  +V FERQDEFDYQLD+DDRFK+S++ +SW+N NFAKA S  RKR+V Q+Y+ +AG   +  KRRK+DSP    S+R S  RSP+A+G M+S+L+ DEIGAAIEAAF
Sbjct:    1 MRGYKQEHVQLPERVLQQPAQWRLDRWLVNNSASVHREQRLATFKSLSTGAVEYAFAPRSGKIVKTFIQQSSTVDPAASALALIEFCTHAVVFKGICAICGETAQSLHFAETKTAVERIPVAYDSNQLAVSRAEAESIASVNARNLLHSQRLSLVLDLDHTLVHATDDPRAPQVINHFPPDADLHSVKAFALAPVIHPNAPPLMHVKLRPHLFEFLHRLSNKFELHIYTMGTRPYADQIANLIDPHKKLFGGRITSREDFEEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISSTGQSFMPNLIRADPYHFWDGLHEAYDRVSATNGRLSTKSNAVGTTDTSKSLLKPNENDTEKEAPRTINGNALHVIHNTEYTNGTLAASGIDSEEDNTRTPTSASASPDTALPDAESPASEPQTNAFNGVSADRAQQERVHDGDGSSXXXXXXXXXXXDGTFDGKRGNGFAE-QAKEHSTPGNATA--ADDTPPASLLDEHSPVPNE-----SAIPDASGTRTLCENADSSSTLFSELVNSWWKQDADPKASNHLLKLAEVLEECHSRFFSIASQAQRESGAVNKGPAKRFRPPADVKRILASVRREVLQECVVCFTGVIPTGVDPHSSPYWSLAKRLGAQCSLEYENGHTTHLVTSETRGRNTRKYKQAMESGAAYVISPAWLDDSAVRFERQDEFDYQLDKDDRFKSSNDYRSWINNNFAKAASSCRKRNVTQLYENQAGAAGS-AKRRKVDSPSRNSSLRGSECRSPMADG-MVSVLTADEIGAAIEAAF 776          
BLAST of Gvermi12379.t1 vs. uniprot
Match: R7QQX4_CHOCR (Protein-serine/threonine phosphatase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQX4_CHOCR)

HSP 1 Score: 306 bits (784), Expect = 3.190e-91
Identity = 206/585 (35.21%), Postives = 294/585 (50.26%), Query Frame = 0
Query:  204 MHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSP-PSG----NVPAPTAVPAXXXXXXXGAKQRGASRPCG---HAHGQEAHAICAVSGAAQRSAQTEQRDRRLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGN-----SQADAQNERLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAV---------GNGSLSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKEKGTVYTGPAKRFEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSSALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVVSPAWVEACSVNFERQDEFDYQLDRDDRFKTSDELKSWVNANFAKAGSLSRKRSVVQMYDAEAGD--DSTRLKRRKLDSPCPSVRDSG--GRSPVAEGGMLSILSQDEIGAAIEAAF 762
            MH+K+RP+L  FL+ +   F LHIYTMG+R YAD++A +IDP  + FGGRITSREDF EG  NQK+IQRLFPCDDSM LIVDDREDVW+S + Q +MPNL+RA+PYHFW G+HE Y+R       +  +   HQL+  PSG    N   P AV              G         HA+               +  Q E+ D R A+ G       E+    + VA+N       T    ++        SQ    +E  V  A  +   +L   SA  +H+  +          S+   G  +          G  +  + F  + K WWE D+ PK  +HLL+LA VL +CH  FF      +   G       ++F+ PADVK +L+  R++VL  CVL+F+G+ P    P +   WNLA RLGA C  ++ +G  TH++ S +R  +T+K   A+ SG A+VV+  WVE C++NFERQ+E  Y       F   ++ + +V     KA    RKR   ++ +    +   +   K+ ++      + D+G  G +  A    + ILS DEIG  +E  F
Sbjct:    1 MHLKVRPNLNHFLETLRVKFNLHIYTMGSRLYADRVAKLIDPDNRFFGGRITSREDFPEGNCNQKNIQRLFPCDDSMALIVDDREDVWLSDSTQPYMPNLLRAQPYHFWVGMHEAYDRVAPP---EHHNPTAHQLADKPSGGSTDNTQQPPAVQGTLTTNSDNTTTIGNGNDISNHRHANLDSPANDSPFQPTGLKVQQPEEADARHAEGGM------ESPNYSNDVAKNSPTAPEDTAITVLSPPQLELRPSQTVGPSEGTVGAATSEPEKQL---SATNIHETDRTNAHDHETKESEQENGDTSARSIKPDGHSGEATNVEKFRSIAKGWWETDSSPKSRSHLLRLAQVLEDCHKEFFDRCKSRKAHNGVEAQSAGQQFQSPADVKDILSEFRKKVLAGCVLTFSGLKPRKDAPETVPEWNLALRLGASCSSEFVHGRTTHVITSLKRVPDTQKCMDAMHSGTAYVVTTDWVEDCALNFERQNELAYCESAQQMFDDGEKFRDYVETRREKAAQALRKRGREELDEIYGNEVVGTIPWKKSRVSEEMDVMDDTGLEGTNGTAA---VRILSHDEIGEVMEDLF 570          
BLAST of Gvermi12379.t1 vs. uniprot
Match: A0A7S3A5N5_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5N5_9RHOD)

HSP 1 Score: 259 bits (662), Expect = 5.800e-75
Identity = 146/305 (47.87%), Postives = 189/305 (61.97%), Query Frame = 0
Query:   23 RLERWLVEPGCSVHREQRIAVFRSLSNAALEYAIAPRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVCGETAQSLHFADTKHTVERIPVAYEAAHLAVSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPEMISCFPPNVDVNSVRAFQLGPVTHPTASALM------HVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNR 321
            +L +WLV  G  V    RIA     + + L+  +APR G +V   +     +  +V P+  I+FC H+V+F G+C +CG     +HF+    + +R+ VAYE+  L VSR EA    +  ARHLL  + LSLVLDLDHTL+HATDD RA   +     +          L P  H     L+       VKLRP L  FL+R+   FELHIYTMGTR YAD IAAIIDP + LFG R+TSR+DF EG LNQK+++R+FPCDD+MVLIVDDREDVW+     S MPNL++A PYHF+ GLHE Y+R
Sbjct:   20 KLVKWLVREGEEVDEGTRIATVEKANASKLD-VLAPRCGTMVGVGVKIGEELKENV-PICSIQFCTHAVIFGGLCTICGRDLSMVHFSQDVPSAQRVNVAYESG-LVVSRDEARRTETDKARHLLDRRLLSLVLDLDHTLLHATDDPRAKAALIMDDQSPQTPGTP--MLSPAHHRGIHQLVLDGKSFFVKLRPGLGNFLRRMKKKFELHIYTMGTRPYADSIAAIIDPERTLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRS-SRMPNLIKARPYHFFKGLHEAYDR 318          
BLAST of Gvermi12379.t1 vs. uniprot
Match: A0A7S0ZJJ3_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJJ3_9RHOD)

HSP 1 Score: 235 bits (599), Expect = 6.530e-64
Identity = 135/347 (38.90%), Postives = 200/347 (57.64%), Query Frame = 0
Query:   22 WRLERWLVEPGCSVHREQRIA--VF---RSLSNAALEYAI-APRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVCGE-----------------------------------TAQSLHFADTKHTVE---RIPVAYEAAHLAVSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPEMISCFPPNVDVNSVRAFQLGPVTHPTASALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQS---FMPNLVRAEPYHFWDGLHEIYNR 321
            W+L +WLV+P   V   Q +A  VF    S ++++L+  + AP +GKL+   +     +    SP++ +EFCPH++++ G+CAVCGE                                   + + L   + K + +   R+ VAY    L+VSR EAES +   A  ++  +RL LVLD+DHTL+HA  D+RA   I   P +V    + +F + P      +  M++K RP L  FL R+ + FELHIYT G RAYA+ +A ++DP  +LF GR+ SR+DF EG L+QK+++R+FPCDDSMVLIVDDREDVW    GQS   ++PNL+   PY F+ G++E+Y+R
Sbjct:   23 WKLAQWLVDPNSKVITGQSVAKIVFVPELSDNSSSLDMLVKAPHNGKLLTHLVKPQQHIHDMSSPISCVEFCPHAIIYAGLCAVCGEHDPVQLTQASTPARPPSLLLDTNTSAVNNSQTASQSQEKLSSTENKKSFKPQARVDVAYAGGELSVSRNEAESMSKRIASRMMRERRLFLVLDIDHTLLHAMCDSRAASAIPLLPEHVS-KDIHSFLMAPDGFTAPAQTMYLKFRPSLMDFLNRMKSKFELHIYTNGRRAYANAVARVLDPQHELFRGRVVSRDDFPEGALSQKNLRRVFPCDDSMVLIVDDREDVW----GQSVDTYLPNLLLVTPYWFFRGVNEVYDR 364          
BLAST of Gvermi12379.t1 vs. uniprot
Match: A0A7S0G191_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G191_9RHOD)

HSP 1 Score: 198 bits (503), Expect = 2.520e-55
Identity = 107/183 (58.47%), Postives = 129/183 (70.49%), Query Frame = 0
Query:  143 ARHLLASQRLSLVLDLDHTLVHATDDARAPE--MISCFPPNVDVNSVRAFQLGPVTHPTA--SALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNR 321
            AR+LL  + LSLVLDLDHTL+HATDD RA    M+    P      + +       HP A       VKLRP L  FL+R+   FELHIYTMGTR+YAD IAAIIDP +KLFG R+TSR+DF EG LNQK+++R+FPCDD+MVLIVDDREDVW+     S MPNL++A PYHF+ GLHE Y+R
Sbjct:    1 ARYLLDRRLLSLVLDLDHTLLHATDDPRAKAALMMDDQSPKTPGTPMLSPAYHKGIHPLALDGQSFFVKLRPGLGNFLRRMKNKFELHIYTMGTRSYADSIAAIIDPERKLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRS-SKMPNLIKARPYHFFKGLHEAYDR 182          
BLAST of Gvermi12379.t1 vs. uniprot
Match: A0A5J4YY12_PORPP (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY12_PORPP)

HSP 1 Score: 213 bits (542), Expect = 4.770e-55
Identity = 140/355 (39.44%), Postives = 185/355 (52.11%), Query Frame = 0
Query:   18 HPEHWRLERWLVEPGCSVHREQRIAVFRS---------LSNAALEYAIAPRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVCGETAQSL-----HFADTKHTV-----ERIPVAYEAAHLAVSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPEMISC-----------FPPNVDVNSVRAFQLGPVTHPTASALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWIS--ATGQSF-------------------MPNLVRAEPYHFWDGLHEIYNR 321
            H   W+L +W V  G SV     +A  R+         L +  +   +A R G + +  + +    D     LA IE+C H+V++ GIC  CGE            A T +       ER+ VAY A  L+V+  EA       AR + + +RL LVLDLDHTL+HA++D  A   +                +   + +  F   P+        M+VKLRP LA+FL R+   FELHIYTMGTRAYAD IA IIDP KK F GRI SREDF EG LNQK+++R+FPCDDSMVLIVDDR+DVW +  A+ QS                    + NL++A PY F+ GL E Y+R
Sbjct:  206 HSAGWKLLKWFVVAGQSVSVGNVLARVRAQHHDRAAAPLPSTRVVELVATRKGVIKSLDVDEGQCFDDHACVLAAIEYCAHAVIYGGICTTCGEEQDDTKNRRRRMAATLNLTGGADGERLDVAY-AGELSVTYKEAVEVGKKAARRMRSERRLYLVLDLDHTLLHASNDPNARAALGADDAPCGHKTDWIKQSPHASDIHTF---PILGGAVQETMYVKLRPGLAEFLSRLVKKFELHIYTMGTRAYADAIARIIDPTKKFFQGRIVSREDFKEGALNQKNLRRVFPCDDSMVLIVDDRDDVWCADVASAQSTSRSSNVLGRSAQFKVPQEPIENLIQASPYAFFSGLEEAYDR 556          
BLAST of Gvermi12379.t1 vs. uniprot
Match: A0A1Y2IQJ0_PYCCO (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2IQJ0_PYCCO)

HSP 1 Score: 199 bits (507), Expect = 5.360e-50
Identity = 195/676 (28.85%), Postives = 289/676 (42.75%), Query Frame = 0
Query:   83 LIEFCPHSVVFKGICAVCGETAQSLHFADTKHTVERIPVAYEAAHLA----VSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPEMIS--------------------------CFP------------PNVD-VNSVRAFQLGPVT------HPTA----------SALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSPPSGNVPAPTAVPAXXXXXXXGAKQRGASRPCGHAHGQ-----------EAHAICAVSGAAQRSAQTEQRDRRLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGNSQADAQNERLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAV----GNGSLSKLFSDL-----VKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKEKGTVYTGPAKRFEPPAD--VKKVLASVRREVLRDCVLSFTGVIPTGVDPRSSALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVVSPAWVEACSVNFERQDEFDYQLDRDDR 677
            ++E C H V   G+C +CG+   S  +            + +  HLA    VS  EA+      A+HLL S++LSL++DLD T+VHAT D    E I+                            P            PN + +  V+ F+LGP         P A            + ++K RP L +FLQ ++  +E+H+YTMGTRAYA+++ A IDPG K+FG RI SR++   G L QKS+QRLFPCD SMV+I+DDR DVW       + PNLV+  PY F+ G+ +I N A+    + +L  +   +SPP   +  P A  A          + G   P G                E   +   S A  +S    + D RLA+  K                                         NE L +N E  +A ++E     K  +E ++   G+  + S     A AV    GNG ++     L     V+    K+ D +    LL++  +L   H RF+    + + E        +KR EP  D  V+ ++  +R + L  C + F+ VIP    P ++ +W  A   GA+C  +      TH+VA+K   R T+K   A   G   +V  AW       ++RQDE  Y LD + R
Sbjct:   91 ILEPCKHGVQLGGLCCLCGKDMTSYDYTGFSDASR---ASIQMTHLANGPLVSLEEAQRIEQETAQHLLRSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWETRQAKKAAARADDDAGSKDAADPDKTLSDEDDEVNPNWEALKDVKKFRLGPEVLGPPQRGPRARGKEKIIEQEGCMYYIKPRPGLQEFLQTMATKYEMHVYTMGTRAYAEEVCAAIDPGGKIFGNRILSRDE--SGSLTQKSLQRLFPCDQSMVVIIDDRADVW------EWSPNLVKVIPYDFFVGIGDI-NSAF----LPKLEPLAPVVSPPPPILADPAAADAVT-------SEAGEVAPEGEXXXXXXXXXXXXXXXELEDLIPSSDALAQS----EEDERLAELKK-----------------------------------------NEILSRNTEALEA-QVEERPLAKKQEELQETAAGEAEAASAGQPAASAVPVANGNGEVTAAQQPLKRERPVRKALLKNDDTE----LLRVRKILETVHERFYEAWEKHKPEDERRKRKHSKRSEPQVDYDVRTIIPRIRTQTLEGCHILFSSVIPLDTRPEATEIWKTAHAFGAKCYTEL-TPRVTHVVAAK---RGTQKVDAARRRGGIKIVWLAWFTDSVALWQRQDETPYLLDPEPR 689          
BLAST of Gvermi12379.t1 vs. uniprot
Match: B0CNC7_LACBS (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Laccaria TaxID=29882 RepID=B0CNC7_LACBS)

HSP 1 Score: 196 bits (499), Expect = 3.690e-49
Identity = 194/663 (29.26%), Postives = 280/663 (42.23%), Query Frame = 0
Query:   64 VATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVCGETAQSLH---FADTKHTVERIPVAYEAAHLAVSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPEMIS-------------------------------CFPPNVDVNSVRAFQLGPVTHPTAS------------------ALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSPPSGNVPAPTAVPAXXXXXXXGAKQRGASRPCGHA-HGQEAHAICAVSGAAQRSAQTEQRDRRLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGNSQADAQNERLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAVGNGSLSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKEKGTVYTGPAKRFEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSSALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVVSPAWVEACSVNFERQDEFDYQLD 673
            V   + Q+ A D     + +IE C H +   G+C +CG+   S+    F+D       I + + A    VS  EA+      A HLL S++LSL++DLD T+VHAT D    E I+                               C P    +  V+ F+LGP +    S                   + ++K RP   +FLQ  S  +E+H+YTMGTRAYA+Q+ A IDP  KLFGGR+ SR++   G L QKS+QRLFPCD SMV+I+DDR DVW       + PNL++  PY F+ G+ +I N A+    + +L  +       S + P PT+ P+            G   P  H  H     A    S A + SA+T                                     T    +   N+  +AQ E      ER  A K E   AL+ H+            H D  G        S+ K  S   +   +K         L ++  +L   H RFF        E     TGP+ +     DV +++  +R EVL    + F+ VIP    P ++ +W +A   GA+C  +  +   TH+VA+K   R T K   A + G   +V  AW   C  +++RQDE  Y LD
Sbjct:   72 VGDVITQNKASDRPA--VIVIEPCKHGMQLGGLCVLCGKDMTSVDYTGFSDASRA--SIQMTHSAFGPTVSFEEAQRIERETADHLLKSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWETRQAKKAAHDPDXXXXXXXXXXDEECNPNWEALRDVKKFRLGPESFVPPSLRGAQQGKGKQKLVENEGCMYYIKPRPGWKEFLQEASTKYEMHVYTMGTRAYAEQVCAAIDPDGKLFGGRVLSRDE--SGSLTQKSLQRLFPCDTSMVVIIDDRADVW------EWSPNLLKVVPYDFFVGIGDI-NSAF----LPKLEPLT------SASTPLPTSKPSETANG-------GTPSPVIHPEHTGAVDATVVASTAPEESAKT------------------------------------ATTKVLMTRNNAALEAQLE------ERPLAKKQE---ALREHE-----------LHPDGPGV-------SVKKTPSPEPEKVPKKPLLKNDDVELERVGKLLRYVHRRFFEAYDARSPENSRRKTGPSSKAY---DVTRIIPRLRSEVLEGVHILFSSVIPLDTKPETTEIWRMAHMFGARCSTELTSD-ITHVVAAK---RGTVKVDMARKRGGIKIVWLAWFTDCIASWQRQDEKPYLLD 634          
BLAST of Gvermi12379.t1 vs. uniprot
Match: A0A0D2B307_9PEZI (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D2B307_9PEZI)

HSP 1 Score: 190 bits (483), Expect = 4.420e-47
Identity = 186/603 (30.85%), Postives = 275/603 (45.61%), Query Frame = 0
Query:   85 EFCPHSVVFKGICAVCG-ETAQSLHFADTKHTVERIPVA--YEAAHLAVSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPE-MISCFPPNVD-VNSVRAFQLGPVTHPTASALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSPPSGNVPAPTAVPAXXXXXXXGAKQRGASRPCGHAHGQEAHAICAVSGAAQRSAQTEQRDRRLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGNSQADAQNERLVQNAERKDADKLENESALKVHDEQKDVCGG---QGASHSDASGGALAVGNGS----LSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKEKGTVYTGPAKRFEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSSALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVVSPAWVEACSVNFERQDEFDYQLDRD 675
            E C H  +F  +C +CG +  Q  ++  ++    R  VA  +    L VS   A +R+    R LL S++LSLV+DLD T++HAT D    E       PN D V  V+AFQL            ++KLRP L QFLQ ++  +ELHIYTMGTRAYA  IA I+DP  K+FG RI SR++   G +  K++ RLFP    MV+I+DDR DVW       +  NLV+  PY F+ G+ +I N ++   T               G VP P                    R      G  A    A  G  +        D + AD+G     + +++     VA       AG+  G  A+  +Q +AQ E +    E  D   L  + AL   DE +DV G      + HS      L   +      L K   D+ + ++E+    K      ++A++ G+          +T  +K  V        E   DVK ++ +++R+VL+  V+ FTGVIP G+D + S L   AQ  GA+          TH++A K+R   T K +QA +     +VS +W+  C   +E  DE  + ++ D
Sbjct:   91 EPCSHEELFGNLCVICGVDVTQLDNYLTSRPNASRATVATSHNNTALKVSERVANTRSEELTRRLLESRKLSLVVDLDQTIIHATVDPTVAEWQKDPDNPNYDAVKDVKAFQLLDDGPGMRGCWYYIKLRPGLDQFLQAIAKKYELHIYTMGTRAYAQNIAKIVDPQHKIFGDRILSRDE--SGSMTAKNLHRLFPVTTDMVVIIDDRGDVW------HWNANLVKVSPYDFFVGIGDI-NSSFLPKT--------------QGAVPKPKV-----------------GRTVATNGGAPAAGNLADKGKERVL------DTQSADNGDMAPDDEDSDLGAQIVAM------AGS--GTDADFTAQTEAQEELIATQLE--DRPLLRRQEALDQLDEAEDVNGDGSETSSEHSQRHRHNLLRDDDDELQYLQKHLEDVHRAFFEEFDARKRRMAAGRVAELRGD----------KTSPKKAPVVDD----LELVPDVKVIMPAMKRQVLQGVVICFTGVIPQGIDHKKSDLGMWAQSFGARINTHLTKS-TTHVIAHKDR--RTSKVRQATQHPRIQIVSVSWLYECFSRWEHVDEGPHTIEFD 620          
BLAST of Gvermi12379.t1 vs. uniprot
Match: UPI0015C2F47D (uncharacterized protein n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C2F47D)

HSP 1 Score: 189 bits (479), Expect = 1.380e-46
Identity = 193/634 (30.44%), Postives = 284/634 (44.79%), Query Frame = 0
Query:   58 PRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVCGETAQSLHFADTKHTVER--IPVAYEAAHLAVSRAEAESRASVNARHLLASQRLSLVLDLDHTLVHATDDARAPEMIS--CFPPNVDVNSVRAFQLGPVTHPTASA--LMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSPPSGNVPAPTAVPAXXXXXXXGAKQRGASRPCGHAHGQEAHAICAVSGAAQRSAQTEQRDRRLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGNSQADAQNERLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAVGNGSLSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKE--KGTVYTGPAKR-----------FEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSSALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVVSPAWVEACSVNFERQDEFDYQL 672
            P  G L    L +   ++A V  + + E C H V  +G+C +CG       +A  +   +R  I + ++   L VS   A        + LL  ++LSLV+DLD T++HA  D    E  S    P +  VN V++FQL       A++    ++KLRP L +FL  VS+ +ELH+YTMGTRAYA  IA I+DP +KLFG R+ SR++   G +  K++QRLFP   +MV+I+DDR DVW         PNL++  PY F+ G+ +I +    ++  +R+  +      P+   P+PT    XXXXXXX              +G+        S  +  SA T++     AD   A+A    +E AR + A +                 +   AQ E   +  E     K  NE  L+   E+ D    QG    +A G  L       + L  D                 L+ L D L + HS F+    R R E  KG     P  R                DV  +L +++  VL   V+  +G++P GV    S +   AQ  GAQ  LD  +   THLV S  R R T+K +QA +     +V+  W+  C   + R DE  Y +
Sbjct:   63 PAEGVLKEWKLEEGMVINADVPCMTVEEACGHEVQIQGLCTLCGADMTETDWASEERGTDRAMINMTHDQTGLMVSENVATKAEHDTQKRLLRQRKLSLVVDLDQTIIHACIDPTVGEWQSDPSNPNHGAVNDVKSFQLSDDAPRGAASGCTYYIKLRPGLREFLDEVSSMYELHVYTMGTRAYAQNIARIVDPDRKLFGNRVISRDE--NGSITAKTLQRLFPVSTNMVVIIDDRADVW-----PLNRPNLIKVMPYDFFKGIGDINS----SFLPKRMDIV------PTDTTPSPTXXXXXXXXXXXXXXXXXXXXLTIQTNGKTMSTTEGQSNDSNDSA-TDRTTSGGADAKVANAVSPLDELARMSGADD----------------EAALKAQTEEQAKTLE-----KQLNERPLQHMQEELDKEEEQG----EAIGQDLVASQPRQNLLVDD--------------DEELISLQDHLADLHSAFYETYDRRRSERKKGEPKHNPGDRPRRHSVDDGVDLSLVPDVGDILDNLKSSVLEGLVIVLSGLVPLGVRVEESDIGIQAQSFGAQV-LDSISKRVTHLVVSSARPR-TKKVQQAAKISSIRIVNQNWLLDCLSQWRRLDESPYYI 637          
The following BLAST results are available for this feature:
BLAST of Gvermi12379.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4T6_9FLOR3.910e-28657.89RNA polymerase II subunit A C-terminal domain phos... [more]
R7QQX4_CHOCR3.190e-9135.21Protein-serine/threonine phosphatase n=1 Tax=Chond... [more]
A0A7S3A5N5_9RHOD5.800e-7547.87RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0ZJJ3_9RHOD6.530e-6438.90RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0G191_9RHOD2.520e-5558.47RNA polymerase II subunit A C-terminal domain phos... [more]
A0A5J4YY12_PORPP4.770e-5539.44RNA polymerase II subunit A C-terminal domain phos... [more]
A0A1Y2IQJ0_PYCCO5.360e-5028.85RNA polymerase II subunit A C-terminal domain phos... [more]
B0CNC7_LACBS3.690e-4929.26RNA polymerase II subunit A C-terminal domain phos... [more]
A0A0D2B307_9PEZI4.420e-4730.85RNA polymerase II subunit A C-terminal domain phos... [more]
UPI0015C2F47D1.380e-4630.44uncharacterized protein n=1 Tax=Geosmithia morbida... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 577..662
e-value: 0.0088
score: 25.3
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 596..654
e-value: 1.0E-5
score: 25.4
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 575..672
score: 12.00424
IPR004274FCP1 homology domainSMARTSM00577forpap2coord: 150..314
e-value: 2.6E-36
score: 136.6
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 153..293
e-value: 5.9E-24
score: 84.6
IPR004274FCP1 homology domainPROSITEPS50969FCP1coord: 147..331
score: 29.825056
IPR011947FCP1-like phosphatase, phosphatase domainTIGRFAMTIGR02250TIGR02250coord: 147..311
e-value: 2.1E-44
score: 149.4
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 138..338
e-value: 9.4E-50
score: 171.2
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 579..672
e-value: 1.1E-19
score: 72.4
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 579..673
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 716..737
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..416
NoneNo IPR availablePANTHERPTHR23081:SF0RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEcoord: 84..675
NoneNo IPR availableCDDcd07521HAD_FCP1-likecoord: 151..291
e-value: 1.48667E-35
score: 129.252
NoneNo IPR availableCDDcd17729BRCT_CTDP1coord: 567..667
e-value: 1.06818E-33
score: 122.641
IPR039189CTD phosphatase Fcp1PANTHERPTHR23081RNA POLYMERASE II CTD PHOSPHATASEcoord: 84..675
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 145..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4437631..4439928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12379.t1Gvermi12379.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4437631..4439928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12379.t1 ID=Gvermi12379.t1|Name=Gvermi12379.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=766bp
MRGFKQEHVSLPPRVLQHPEHWRLERWLVEPGCSVHREQRIAVFRSLSNA
ALEYAIAPRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVC
GETAQSLHFADTKHTVERIPVAYEAAHLAVSRAEAESRASVNARHLLASQ
RLSLVLDLDHTLVHATDDARAPEMISCFPPNVDVNSVRAFQLGPVTHPTA
SALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLF
GGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFM
PNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSPPSGNVPAPTA
VPAGSQVPNGGAKQRGASRPCGHAHGQEAHAICAVSGAAQRSAQTEQRDR
RLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGNSQADAQNE
RLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAVGNG
SLSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKE
KGTVYTGPAKRFEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSS
ALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVV
SPAWVEACSVNFERQDEFDYQLDRDDRFKTSDELKSWVNANFAKAGSLSR
KRSVVQMYDAEAGDDSTRLKRRKLDSPCPSVRDSGGRSPVAEGGMLSILS
QDEIGAAIEAAFATE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR004274FCP1_dom
IPR011947FCP1_euk
IPR023214HAD_sf
IPR036420BRCT_dom_sf
IPR039189Fcp1
IPR036412HAD-like_sf